Pentamidine (isethionate)_C32 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pentamidine (isethionate) perturbation in C32 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pentamidine (isethionate)_C32 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ASPH aspartate beta-hydroxylase 0.11651
PHF21A PHD finger protein 21A 0.0892178
NDRG1 N-myc downstream regulated 1 0.0838852
NLGN1 neuroligin 1 0.0838339
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0788914
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0772642
IGFBP3 insulin-like growth factor binding protein 3 0.0743791
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0719417
CD109 CD109 molecule 0.0687177
CENPF centromere protein F, 350/400kDa 0.0655879
PTK2 protein tyrosine kinase 2 0.0649892
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0626048
HILPDA hypoxia inducible lipid droplet-associated 0.0582621
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0580836
GPC6 glypican 6 0.058079
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0579051
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.054828
MT2A metallothionein 2A 0.0544607
KMT2C lysine (K)-specific methyltransferase 2C 0.0509264
MAML3 mastermind-like 3 (Drosophila) 0.0494557
PRELID2 PRELI domain containing 2 0.0489747
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0489441
CTTNBP2 cortactin binding protein 2 0.0486712
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0475406
KIRREL1 kirre like nephrin family adhesion molecule 1 0.0449818
VGF VGF nerve growth factor inducible 0.042886
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0425033
B2M beta-2-microglobulin 0.0403663
ZNF638 zinc finger protein 638 0.0403439
SETBP1 SET binding protein 1 0.0389011
CLMN calmin (calponin-like, transmembrane) 0.0377401
FNDC3B fibronectin type III domain containing 3B 0.0377131
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0376401
KMT2E lysine (K)-specific methyltransferase 2E 0.0367659
FYN FYN proto-oncogene, Src family tyrosine kinase 0.0362299
NUP58 nucleoporin 58 0.0356991
LEF1 lymphoid enhancer-binding factor 1 0.0354089
TAC4 tachykinin 4 (hemokinin) 0.0351398
ZNF292 zinc finger protein 292 0.0337094
FOSL1 FOS-like antigen 1 0.0336217
KTN1 kinectin 1 (kinesin receptor) 0.0319377
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 0.0313705
PCDH7 protocadherin 7 0.031343
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.031128
PDK3 pyruvate dehydrogenase kinase, isozyme 3 0.0306357
TMEM178B transmembrane protein 178B 0.0295904
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0292638
VEGFA vascular endothelial growth factor A 0.0285369
TOP2A topoisomerase (DNA) II alpha 170kDa 0.028265
INSIG1 insulin induced gene 1 0.0281351
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0277751
JARID2 jumonji, AT rich interactive domain 2 0.0274782
GALNT18 polypeptide N-acetylgalactosaminyltransferase 18 0.0270427
RFX7 regulatory factor X, 7 0.0269055
CABIN1 calcineurin binding protein 1 0.0256582
RPS12 ribosomal protein S12 0.0256548
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0250513
FMNL2 formin-like 2 0.0249119
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.02485
ATXN1 ataxin 1 0.0243178
RNASE12 ribonuclease, RNase A family, 12 (non-active) 0.0241197
NAV1 neuron navigator 1 0.0235907
MEF2A myocyte enhancer factor 2A 0.0233924
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0233473
RNF150 ring finger protein 150 0.0229965
CHD1L chromodomain helicase DNA binding protein 1-like 0.0225929
SSBP3 single stranded DNA binding protein 3 0.0225911
UBA6 ubiquitin-like modifier activating enzyme 6 0.0224247
UTRN utrophin 0.022314
FLNB filamin B, beta 0.02225
TIMP3 TIMP metallopeptidase inhibitor 3 0.0218169
IGF1R insulin-like growth factor 1 receptor 0.0215652
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0213111
ZNF704 zinc finger protein 704 0.0212802
KDM5B lysine (K)-specific demethylase 5B 0.0212316
TIMP2 TIMP metallopeptidase inhibitor 2 0.0212101
AKAP12 A kinase (PRKA) anchor protein 12 0.0212021
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0211361
TBC1D5 TBC1 domain family, member 5 0.0211303
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0210353
RCOR1 REST corepressor 1 0.0208835
CTBP2 C-terminal binding protein 2 0.0207295
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.020656
CCDC200 coiled-coil domain containing 200 0.0203828
PARVB parvin, beta 0.02032
MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 0.0202956
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0202689
NFE2L1 nuclear factor, erythroid 2-like 1 0.0201844
EYA1 EYA transcriptional coactivator and phosphatase 1 0.0199283
MIDEAS mitotic deacetylase associated SANT domain protein 0.0198791
SUCO SUN domain containing ossification factor 0.0198637
RNF145 ring finger protein 145 0.0198101
PLIN2 perilipin 2 0.0197263
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0196248
EXT1 exostosin glycosyltransferase 1 0.0195408
INTS6 integrator complex subunit 6 0.0194362
BIRC6 baculoviral IAP repeat containing 6 0.0193896
KDM2B lysine (K)-specific demethylase 2B 0.0193891
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0191602
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0190487

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.386905
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.192501
FMN1 formin 1 -0.175062
IFI16 interferon, gamma-inducible protein 16 -0.125786
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.10889
COL19A1 collagen, type XIX, alpha 1 -0.0818956
ACTG1 actin gamma 1 -0.0733157
NPC1 Niemann-Pick disease, type C1 -0.0653796
LOC112694756 uncharaterized LOC112694756 -0.0638839
TNNC1 troponin C type 1 (slow) -0.0614798
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0600788
CALU calumenin -0.0598381
HMCN1 hemicentin 1 -0.0562701
UBC ubiquitin C -0.0511117
VCL vinculin -0.0473563
WWTR1 WW domain containing transcription regulator 1 -0.045088
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0436726
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0424127
FRMD5 FERM domain containing 5 -0.0403987
PDIA4 protein disulfide isomerase family A, member 4 -0.0393005
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0387726
MITF microphthalmia-associated transcription factor -0.038034
ICAM1 intercellular adhesion molecule 1 -0.0379311
PTCHD4 patched domain containing 4 -0.0378565
VIM vimentin -0.0377591
CPEB2 cytoplasmic polyadenylation element binding protein 2 -0.0359168
NPAS2 neuronal PAS domain protein 2 -0.0356532
A2M alpha-2-macroglobulin -0.0339429
AHNAK AHNAK nucleoprotein -0.0335175
PI15 peptidase inhibitor 15 -0.0332447
NCOA7 nuclear receptor coactivator 7 -0.0330102
EHBP1 EH domain binding protein 1 -0.0324957
INPP5F inositol polyphosphate-5-phosphatase F -0.0321344
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.032031
ADNP activity-dependent neuroprotector homeobox -0.0314794
TM4SF1 transmembrane 4 L six family member 1 -0.0296298
ATF6 activating transcription factor 6 -0.0284808
ARHGAP5 Rho GTPase activating protein 5 -0.0284558
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0283025
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0277214
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 -0.027512
RHOJ ras homolog family member J -0.0268807
DSTYK dual serine/threonine and tyrosine protein kinase -0.0267603
BACE2 beta-site APP-cleaving enzyme 2 -0.0265356
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0263653
FRMD4A FERM domain containing 4A -0.0260346
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0258422
OXR1 oxidation resistance 1 -0.0253577
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0253175
ANKRD28 ankyrin repeat domain 28 -0.0245693
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0241629
MMP14 matrix metallopeptidase 14 (membrane-inserted) -0.0241023
ZMYND8 zinc finger, MYND-type containing 8 -0.0238356
NAMPT nicotinamide phosphoribosyltransferase -0.0235762
CDH19 cadherin 19, type 2 -0.0233626
APP amyloid beta (A4) precursor protein -0.0231368
AHCYL2 adenosylhomocysteinase-like 2 -0.0230361
RTN4 reticulon 4 -0.0229802
C10ORF90 chromosome 10 open reading frame 90 -0.0229624
PDE10A phosphodiesterase 10A -0.0224366
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0223875
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0223505
DUSP6 dual specificity phosphatase 6 -0.0223396
EGR1 early growth response 1 -0.0221681
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0221084
FHL2 four and a half LIM domains 2 -0.0218924
ZC3H11A zinc finger CCCH-type containing 11A -0.0218483
SFTPA2 surfactant protein A2 -0.0216181
POTEF POTE ankyrin domain family, member F -0.021291
UBE3C ubiquitin protein ligase E3C -0.021279
SDCBP syndecan binding protein (syntenin) -0.0209411
TMEM87A transmembrane protein 87A -0.0204435
DMD dystrophin -0.0202368
PNLIPRP3 pancreatic lipase-related protein 3 -0.0200061
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0198535
TCF12 transcription factor 12 -0.0198416
RCAN1 regulator of calcineurin 1 -0.0198212
GNS glucosamine (N-acetyl)-6-sulfatase -0.0196552
KDM3A lysine (K)-specific demethylase 3A -0.0195852
HDAC9 histone deacetylase 9 -0.0195527
HLA-E major histocompatibility complex, class I, E -0.0193689
CD59 CD59 molecule, complement regulatory protein -0.0192264
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0190112
UBE2H ubiquitin-conjugating enzyme E2H -0.0188585
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0187616
KLHDC10 kelch domain containing 10 -0.0187159
PUM2 pumilio RNA-binding family member 2 -0.0184548
SNCA synuclein, alpha (non A4 component of amyloid precursor) -0.0183904
RUNX1 runt-related transcription factor 1 -0.0183319
AOPEP aminopeptidase O (putative) -0.0182632
EXOC6B exocyst complex component 6B -0.0181719
POM121C POM121 transmembrane nucleoporin C -0.0181369
IFRD1 interferon-related developmental regulator 1 -0.0180521
NPR2 natriuretic peptide receptor 2 -0.0179791
IER3 immediate early response 3 -0.0179735
TXNIP thioredoxin interacting protein -0.017957
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0179345
FAM3C family with sequence similarity 3, member C -0.0178215
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0176949
ACTN1 actinin, alpha 1 -0.0176301