Pentamidine (isethionate)_CFPAC-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pentamidine (isethionate) perturbation in CFPAC-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pentamidine (isethionate)_CFPAC-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
B2M beta-2-microglobulin 0.0924639
NDRG1 N-myc downstream regulated 1 0.0871001
AKAP12 A kinase (PRKA) anchor protein 12 0.0786892
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0654862
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0647552
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0626637
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0623388
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0617716
IGFBP3 insulin-like growth factor binding protein 3 0.0585624
FAM13A family with sequence similarity 13, member A 0.0560545
FNDC3B fibronectin type III domain containing 3B 0.0548781
UBA6 ubiquitin-like modifier activating enzyme 6 0.0545303
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0539318
APLP2 amyloid beta (A4) precursor-like protein 2 0.053037
SPAG9 sperm associated antigen 9 0.051641
MEF2A myocyte enhancer factor 2A 0.0500075
RCOR1 REST corepressor 1 0.0499199
MT2A metallothionein 2A 0.0486398
FOSL1 FOS-like antigen 1 0.0474367
CCNY cyclin Y 0.0473518
PCBP2 poly(rC) binding protein 2 0.0471331
KTN1 kinectin 1 (kinesin receptor) 0.0469476
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0466701
ADAM9 ADAM metallopeptidase domain 9 0.0454855
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0427571
MCL1 myeloid cell leukemia 1 0.0426777
TMSB4X thymosin beta 4, X-linked 0.042127
EZR ezrin 0.0410322
RTN4 reticulon 4 0.0399595
RBM39 RNA binding motif protein 39 0.0397233
NPEPPS aminopeptidase puromycin sensitive 0.0387139
PRRC2C proline-rich coiled-coil 2C 0.0382786
ZFP36L1 ZFP36 ring finger protein-like 1 0.0381402
POTEF POTE ankyrin domain family, member F 0.0379349
VIM vimentin 0.0374811
BLZF1 basic leucine zipper nuclear factor 1 0.0373344
WWTR1 WW domain containing transcription regulator 1 0.0368547
FTH1 ferritin, heavy polypeptide 1 0.0364875
AKAP13 A kinase (PRKA) anchor protein 13 0.0364832
TPM3 tropomyosin 3 0.0363158
VEGFA vascular endothelial growth factor A 0.0360359
LDHA lactate dehydrogenase A 0.0360342
TFG TRK-fused gene 0.0355008
KMT2E lysine (K)-specific methyltransferase 2E 0.0352269
VMP1 vacuole membrane protein 1 0.0348487
MT1X metallothionein 1X 0.0337197
MSN moesin 0.0331925
ZNF292 zinc finger protein 292 0.0327647
FLNB filamin B, beta 0.032295
CCNL1 cyclin L1 0.0322401
HELZ helicase with zinc finger 0.0319227
HDGF hepatoma-derived growth factor 0.0318785
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0312233
PPARD peroxisome proliferator-activated receptor delta 0.0311217
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0309038
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0306703
OPTN optineurin 0.0301658
VEZT vezatin, adherens junctions transmembrane protein 0.0301468
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0297853
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0293928
ESYT2 extended synaptotagmin-like protein 2 0.0293859
YTHDC1 YTH domain containing 1 0.0290948
MXD1 MAX dimerization protein 1 0.0290407
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0287855
TOP1 topoisomerase (DNA) I 0.0287157
PDZD8 PDZ domain containing 8 0.0286986
ADAM28 ADAM metallopeptidase domain 28 0.0286438
STRN3 striatin, calmodulin binding protein 3 0.0285527
COPA coatomer protein complex, subunit alpha 0.0282709
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0281802
CDC27 cell division cycle 27 0.027886
DIAPH1 diaphanous-related formin 1 0.0278567
INSIG2 insulin induced gene 2 0.0271698
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0269693
TRIP12 thyroid hormone receptor interactor 12 0.0266405
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.026131
ARHGAP5 Rho GTPase activating protein 5 0.0259283
ANKRD11 ankyrin repeat domain 11 0.0256389
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0255939
CD2AP CD2-associated protein 0.0249837
HPCAL1 hippocalcin-like 1 0.0247036
DDIT4 DNA-damage-inducible transcript 4 0.0246185
TSC22D2 TSC22 domain family, member 2 0.0246181
SRP54 signal recognition particle 54kDa 0.0244706
ACBD3 acyl-CoA binding domain containing 3 0.0244356
SEC23A Sec23 homolog A (S. cerevisiae) 0.0243562
RSRC2 arginine/serine-rich coiled-coil 2 0.0242104
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0239366
FAM162A family with sequence similarity 162, member A 0.0237594
YBX1 Y box binding protein 1 0.023752
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0237497
FNBP1L formin binding protein 1-like 0.0236594
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0236443
G0S2 G0/G1 switch 2 0.0235087
MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3 0.0233565
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0232395
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0232309
KDM2A lysine (K)-specific demethylase 2A 0.0230098
RAB7A RAB7A, member RAS oncogene family 0.0230068
AKAP9 A kinase (PRKA) anchor protein 9 0.0228877

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.149161
CP ceruloplasmin (ferroxidase) -0.131816
AHNAK AHNAK nucleoprotein -0.106548
SAMD4A sterile alpha motif domain containing 4A -0.102106
MMP7 matrix metallopeptidase 7 -0.0751312
LAMC2 laminin, gamma 2 -0.0698579
TPT1 tumor protein, translationally-controlled 1 -0.0692225
PCDH7 protocadherin 7 -0.0690126
ANXA2 annexin A2 -0.0673599
LAMB3 laminin, beta 3 -0.0643499
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0634943
TMSB10 thymosin beta 10 -0.0610899
RNF213 ring finger protein 213 -0.05989
RPLP1 ribosomal protein, large, P1 -0.0575273
HLA-E major histocompatibility complex, class I, E -0.0559637
PLEC plectin -0.0558034
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0535428
RPL23 ribosomal protein L23 -0.0523592
RPL35A ribosomal protein L35a -0.0517375
EIF1 eukaryotic translation initiation factor 1 -0.0516905
ALCAM activated leukocyte cell adhesion molecule -0.0503418
KLF6 Kruppel-like factor 6 -0.0464567
PDE4D phosphodiesterase 4D, cAMP-specific -0.0457937
LOC112694756 uncharaterized LOC112694756 -0.0446641
TM4SF1 transmembrane 4 L six family member 1 -0.0436259
KRT19 keratin 19, type I -0.0426688
MX1 MX dynamin-like GTPase 1 -0.0424699
ISG15 ISG15 ubiquitin-like modifier -0.0418418
H1-0 H1.0 linker histone -0.041471
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0406642
HLA-C major histocompatibility complex, class I, C -0.0401468
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0397986
NT5C2 5'-nucleotidase, cytosolic II -0.0396092
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0394019
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0387706
UGDH UDP-glucose 6-dehydrogenase -0.0363361
HLA-B major histocompatibility complex, class I, B -0.0360604
EFNA5 ephrin-A5 -0.0353083
MAML2 mastermind-like 2 (Drosophila) -0.0353056
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0350325
SYNRG synergin, gamma -0.0349371
MUC4 mucin 4, cell surface associated -0.0347309
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0346521
NRG3 neuregulin 3 -0.0341073
ARHGAP26 Rho GTPase activating protein 26 -0.0337844
GNAS GNAS complex locus -0.0337342
APOL2 apolipoprotein L, 2 -0.033489
MYOF myoferlin -0.0332997
WARS1 tryptophanyl-tRNA synthetase 1 -0.0330058
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) -0.0322104
PATJ PATJ crumbs cell polarity complex component -0.0321709
RPL31 ribosomal protein L31 -0.032142
KLF5 Kruppel-like factor 5 (intestinal) -0.0317393
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0315722
SAMD9 sterile alpha motif domain containing 9 -0.0314357
DPYD dihydropyrimidine dehydrogenase -0.0311781
ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 -0.0311607
RRBP1 ribosome binding protein 1 -0.0306908
RASAL2 RAS protein activator like 2 -0.0305781
EXT1 exostosin glycosyltransferase 1 -0.0303507
CANX calnexin -0.0300797
AHNAK2 AHNAK nucleoprotein 2 -0.0298789
RPS24 ribosomal protein S24 -0.0294756
XAF1 XIAP associated factor 1 -0.0288726
ZBTB20 zinc finger and BTB domain containing 20 -0.0288055
PARD3 par-3 family cell polarity regulator -0.0287875
TRIO trio Rho guanine nucleotide exchange factor -0.0286473
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0285029
IGF1R insulin-like growth factor 1 receptor -0.0282914
DST dystonin -0.0281821
APP amyloid beta (A4) precursor protein -0.0279475
EHBP1 EH domain binding protein 1 -0.0276705
LPP LIM domain containing preferred translocation partner in lipoma -0.0276344
CFB complement factor B -0.0276231
IFIH1 interferon induced with helicase C domain 1 -0.0274512
APOL1 apolipoprotein L, 1 -0.0273218
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0269283
IFI16 interferon, gamma-inducible protein 16 -0.0268487
EGFR epidermal growth factor receptor -0.0265037
SLC4A4 solute carrier family 4 (sodium bicarbonate cotransporter), member 4 -0.0262168
LASP1 LIM and SH3 protein 1 -0.0258647
PRKCE protein kinase C, epsilon -0.0257895
NCKAP5 NCK-associated protein 5 -0.0253525
ACTN4 actinin, alpha 4 -0.0251499
CEMIP cell migration inducing protein, hyaluronan binding -0.0247961
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0246582
SLC38A1 solute carrier family 38, member 1 -0.0246053
RUNX1 runt-related transcription factor 1 -0.0245745
HDLBP high density lipoprotein binding protein -0.0245203
SP100 SP100 nuclear antigen -0.0243864
AK1 adenylate kinase 1 -0.0242754
THSD4 thrombospondin, type I, domain containing 4 -0.0239899
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0238649
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0236941
NABP1 nucleic acid binding protein 1 -0.0230424
DSG2 desmoglein 2 -0.0230236
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0228902
ASPH aspartate beta-hydroxylase -0.0228517
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0225093
CFLAR CASP8 and FADD-like apoptosis regulator -0.0222792