Pentamidine (isethionate)_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pentamidine (isethionate) perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pentamidine (isethionate)_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.127039
NALF1 NALCN channel auxiliary factor 1 0.0634914
IGFBP3 insulin-like growth factor binding protein 3 0.0519702
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0457571
IGF2 insulin-like growth factor 2 0.0442195
MEF2A myocyte enhancer factor 2A 0.0437182
RPS6 ribosomal protein S6 0.0360105
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0332754
HILPDA hypoxia inducible lipid droplet-associated 0.0292229
RPL35A ribosomal protein L35a 0.0289605
CRH corticotropin releasing hormone 0.0262116
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0257701
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0243906
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0240577
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0238084
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 0.0226928
CA12 carbonic anhydrase XII 0.0214764
SMAD9 SMAD family member 9 0.0213658
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0213288
DIAPH2 diaphanous-related formin 2 0.0213248
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 0.0210754
GPC5 glypican 5 0.0206757
TRIM24 tripartite motif containing 24 0.0206743
ANTXR1 anthrax toxin receptor 1 0.0205853
HIP1 huntingtin interacting protein 1 0.0200985
RPTOR regulatory associated protein of MTOR, complex 1 0.0196717
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) 0.0193071
CNTN4 contactin 4 0.0191764
HMGA2 high mobility group AT-hook 2 0.0190473
THSD4 thrombospondin, type I, domain containing 4 0.0189701
TET2 tet methylcytosine dioxygenase 2 0.0187159
ERRFI1 ERBB receptor feedback inhibitor 1 0.0186422
MXI1 MAX interactor 1, dimerization protein 0.0181231
B2M beta-2-microglobulin 0.0180433
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.017945
PIK3C3 phosphatidylinositol 3-kinase, catalytic subunit type 3 0.0177245
RPL36 ribosomal protein L36 0.0175314
BICD1 bicaudal D homolog 1 (Drosophila) 0.017479
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 0.0174545
SOX4 SRY (sex determining region Y)-box 4 0.0172125
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 0.0171867
PYGL phosphorylase, glycogen, liver 0.0171291
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0170883
TRIO trio Rho guanine nucleotide exchange factor 0.0170423
CALD1 caldesmon 1 0.0168213
KDM2A lysine (K)-specific demethylase 2A 0.0167731
COL4A2 collagen, type IV, alpha 2 0.0166561
SCAF11 SR-related CTD-associated factor 11 0.0164191
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.0164153
FLT1 fms-related tyrosine kinase 1 0.0162058
CPNE8 copine VIII 0.0161934
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0161785
LARS1 leucyl-tRNA synthetase 1 0.0161323
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 0.0161252
DCAF7 DDB1 and CUL4 associated factor 7 0.0160271
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0159318
ASPH aspartate beta-hydroxylase 0.0159129
FER fer (fps/fes related) tyrosine kinase 0.0158298
IGFBP4 insulin-like growth factor binding protein 4 0.015741
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0156268
ZNF395 zinc finger protein 395 0.0156237
OXR1 oxidation resistance 1 0.0154261
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) 0.0152931
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0152798
UBA6 ubiquitin-like modifier activating enzyme 6 0.0151343
RPS14 ribosomal protein S14 0.0149901
GREM2 gremlin 2, DAN family BMP antagonist 0.0149366
HAND2 heart and neural crest derivatives expressed 2 0.0149344
SNX9 sorting nexin 9 0.0149245
SEPTIN9 septin 9 0.0148484
IGSF9B immunoglobulin superfamily, member 9B 0.0146155
DENND4A DENN/MADD domain containing 4A 0.0144203
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.014406
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.014403
USP34 ubiquitin specific peptidase 34 0.0143959
WDR41 WD repeat domain 41 0.0143639
TBL1X transducin (beta)-like 1X-linked 0.0142901
SHPRH SNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligase 0.0142899
SAMD5 sterile alpha motif domain containing 5 0.0142325
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0141301
RPS17 ribosomal protein S17 0.0140962
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0140213
FNDC3B fibronectin type III domain containing 3B 0.0140018
RPS2 ribosomal protein S2 0.0139843
OSBPL1A oxysterol binding protein-like 1A 0.0138688
PCBP3 poly(rC) binding protein 3 0.0138205
TRPA1 transient receptor potential cation channel, subfamily A, member 1 0.0138169
ZNF146 zinc finger protein 146 0.0137792
RAB6A RAB6A, member RAS oncogene family 0.0137269
CHD7 chromodomain helicase DNA binding protein 7 0.0136971
PTPRD protein tyrosine phosphatase, receptor type, D 0.0136732
YY1 YY1 transcription factor 0.0135963
YBX3 Y box binding protein 3 0.0135954
PAQR5 progestin and adipoQ receptor family member V 0.0135785
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0133969
RPL30 ribosomal protein L30 0.0133384
GSE1 Gse1 coiled-coil protein 0.0133092
SUMF1 sulfatase modifying factor 1 0.0131356
MYO9A myosin IXA 0.0131332
OCIAD1 OCIA domain containing 1 0.0130935

decreased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.162288
VCL vinculin -0.105582
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0959103
TLE4 transducin-like enhancer of split 4 -0.0919517
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0815569
AHNAK AHNAK nucleoprotein -0.0763789
LPIN1 lipin 1 -0.0688324
SYT1 synaptotagmin I -0.0645136
DSCAM Down syndrome cell adhesion molecule -0.0602347
FMN1 formin 1 -0.0548792
UBC ubiquitin C -0.0539099
VMP1 vacuole membrane protein 1 -0.0538742
DST dystonin -0.051315
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0509339
THBS1 thrombospondin 1 -0.0474075
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0457092
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 -0.043314
ANXA2 annexin A2 -0.043164
PCBP2 poly(rC) binding protein 2 -0.0409531
TOP2A topoisomerase (DNA) II alpha 170kDa -0.039797
MED13 mediator complex subunit 13 -0.0388538
POTEF POTE ankyrin domain family, member F -0.0373464
VIM vimentin -0.0372064
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog -0.0370558
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) -0.035564
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0351173
KMT2C lysine (K)-specific methyltransferase 2C -0.0349838
TPST1 tyrosylprotein sulfotransferase 1 -0.0346994
ADAR adenosine deaminase, RNA-specific -0.0328437
SLIT2 slit homolog 2 (Drosophila) -0.0326332
HMGB2 high mobility group box 2 -0.0324786
RPS27A ribosomal protein S27a -0.0324159
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0322745
MEIS2 Meis homeobox 2 -0.0320264
SIK2 salt-inducible kinase 2 -0.0318259
TRIB2 tribbles pseudokinase 2 -0.0309198
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0302796
MED13L mediator complex subunit 13-like -0.0297319
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0296979
GLG1 golgi glycoprotein 1 -0.029675
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0284357
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.027775
NCAM2 neural cell adhesion molecule 2 -0.0276911
AOPEP aminopeptidase O (putative) -0.0276454
ENAH enabled homolog (Drosophila) -0.0275675
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0274696
NFIB nuclear factor I/B -0.027138
TTC3 tetratricopeptide repeat domain 3 -0.027012
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0269801
PDE10A phosphodiesterase 10A -0.0269556
NIPBL Nipped-B homolog (Drosophila) -0.026814
RBM39 RNA binding motif protein 39 -0.0268019
SETD5 SET domain containing 5 -0.0265185
ZFC3H1 zinc finger, C3H1-type containing -0.026444
NAMPT nicotinamide phosphoribosyltransferase -0.0264418
STK38L serine/threonine kinase 38 like -0.026437
CANX calnexin -0.0262526
ENO1 enolase 1, (alpha) -0.0262512
FOXO3 forkhead box O3 -0.0261793
EEF2 eukaryotic translation elongation factor 2 -0.0260797
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0258551
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.025623
ATXN1 ataxin 1 -0.0255897
AMOTL1 angiomotin like 1 -0.0253343
EXT1 exostosin glycosyltransferase 1 -0.025321
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0251205
ZFAND3 zinc finger, AN1-type domain 3 -0.0238287
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0238027
FERMT2 fermitin family member 2 -0.0235724
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.023458
RNF213 ring finger protein 213 -0.0233501
SFPQ splicing factor proline/glutamine-rich -0.0230235
SRSF1 serine/arginine-rich splicing factor 1 -0.0229583
KDM3A lysine (K)-specific demethylase 3A -0.0228818
FHL2 four and a half LIM domains 2 -0.0228404
KAT6A K(lysine) acetyltransferase 6A -0.022744
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.022697
SSBP2 single-stranded DNA binding protein 2 -0.0226907
LOC112694756 uncharaterized LOC112694756 -0.0224863
DYNC1LI2 dynein, cytoplasmic 1, light intermediate chain 2 -0.0222692
ZC3H11A zinc finger CCCH-type containing 11A -0.0220986
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.021982
TOP1 topoisomerase (DNA) I -0.0219019
MBNL2 muscleblind-like splicing regulator 2 -0.0217995
SLC38A2 solute carrier family 38, member 2 -0.021761
CD36 CD36 molecule (thrombospondin receptor) -0.0215242
DISP1 dispatched homolog 1 (Drosophila) -0.0215181
NAA15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit -0.0215088
PCNX1 pecanex 1 -0.0213764
TPT1 tumor protein, translationally-controlled 1 -0.0213394
NRG1 neuregulin 1 -0.0212578
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 -0.0212536
CENPF centromere protein F, 350/400kDa -0.0211183
CLTC clathrin, heavy chain (Hc) -0.0210881
TPM1 tropomyosin 1 (alpha) -0.0210822
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0210478
CSNK1A1 casein kinase 1, alpha 1 -0.020991
SYNPO2 synaptopodin 2 -0.0209206
PCDH9 protocadherin 9 -0.0208387
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0207176