Pentamidine (isethionate)_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pentamidine (isethionate) perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pentamidine (isethionate)_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
B2M beta-2-microglobulin 0.247317
SQSTM1 sequestosome 1 0.168151
TSC22D1 TSC22 domain family, member 1 0.109642
EZR ezrin 0.101187
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0904141
ZMYND8 zinc finger, MYND-type containing 8 0.0839767
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0721166
LMO7 LIM domain 7 0.0706509
INTS6 integrator complex subunit 6 0.070404
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0657121
ANXA2 annexin A2 0.0643377
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0617921
IFI6 interferon, alpha-inducible protein 6 0.0564088
SDC4 syndecan 4 0.0544072
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.0510583
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0499778
CXCL8 chemokine (C-X-C motif) ligand 8 0.0474615
IGF1R insulin-like growth factor 1 receptor 0.0472351
GRK3 G protein-coupled receptor kinase 3 0.0443442
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.0442762
NKD1 naked cuticle homolog 1 (Drosophila) 0.0437717
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0435361
ZBTB20 zinc finger and BTB domain containing 20 0.0434673
PTMA prothymosin, alpha 0.0429757
ERRFI1 ERBB receptor feedback inhibitor 1 0.0423029
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0422186
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0416836
MAML2 mastermind-like 2 (Drosophila) 0.0405243
SOD2 superoxide dismutase 2, mitochondrial 0.040281
SPATA13 spermatogenesis associated 13 0.0399181
JMJD1C jumonji domain containing 1C 0.0393524
EPS8 epidermal growth factor receptor pathway substrate 8 0.0388573
SAMD4A sterile alpha motif domain containing 4A 0.0383727
MORF4L2 mortality factor 4 like 2 0.0382753
CSTB cystatin B (stefin B) 0.0377834
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0376524
JUN jun proto-oncogene 0.0376171
AHNAK AHNAK nucleoprotein 0.0372495
SPDYA speedy/RINGO cell cycle regulator family member A 0.0371168
IRF1 interferon regulatory factor 1 0.0367112
HLA-B major histocompatibility complex, class I, B 0.0367074
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0365811
PHF3 PHD finger protein 3 0.0357372
NAMPT nicotinamide phosphoribosyltransferase 0.0354783
FTH1 ferritin, heavy polypeptide 1 0.0351531
TRA2A transformer 2 alpha homolog (Drosophila) 0.0348265
NT5C3A 5'-nucleotidase, cytosolic IIIA 0.0347287
PTGR1 prostaglandin reductase 1 0.0345863
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0333786
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0332134
PGK1 phosphoglycerate kinase 1 0.0320361
RAB1A RAB1A, member RAS oncogene family 0.0319634
ATXN1 ataxin 1 0.0310425
STYXL2 serine/threonine/tyrosine interacting like 2 0.0309503
TRIO trio Rho guanine nucleotide exchange factor 0.0309349
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.030809
ITPKC inositol-trisphosphate 3-kinase C 0.0304691
NCOA7 nuclear receptor coactivator 7 0.0303885
YME1L1 YME1-like 1 ATPase 0.0303675
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0303356
TPT1 tumor protein, translationally-controlled 1 0.0299505
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0298603
PRRC2C proline-rich coiled-coil 2C 0.0296313
CSTPP1 centriolar satellite-associated tubulin polyglutamylase complex regulator 1 0.029208
MCL1 myeloid cell leukemia 1 0.0291494
OGA O-GlcNAcase 0.0281815
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0280391
GMDS GDP-mannose 4,6-dehydratase 0.0279203
RPL34 ribosomal protein L34 0.0277954
VIM vimentin 0.0276391
YBX3 Y box binding protein 3 0.0275752
S100A10 S100 calcium binding protein A10 0.0272706
PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha 0.0271137
LAMB3 laminin, beta 3 0.0270954
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.026805
TMSB4X thymosin beta 4, X-linked 0.0266913
CDHR2 cadherin-related family member 2 0.0257399
HBP1 HMG-box transcription factor 1 0.0257175
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.0254749
CD46 CD46 molecule, complement regulatory protein 0.0253552
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0253495
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0253182
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.0252226
PLIN2 perilipin 2 0.0251558
ENO1 enolase 1, (alpha) 0.0249754
SLC22A23 solute carrier family 22, member 23 0.0249104
PTPRF protein tyrosine phosphatase, receptor type, F 0.0247487
TOX3 TOX high mobility group box family member 3 0.0246103
EPHB2 EPH receptor B2 0.0243719
MBD5 methyl-CpG binding domain protein 5 0.0241907
TOP1 topoisomerase (DNA) I 0.024143
IRS2 insulin receptor substrate 2 0.0240743
DEK DEK proto-oncogene 0.0237468
PCED1B PC-esterase domain containing 1B 0.0236564
GCC2 GRIP and coiled-coil domain containing 2 0.0234995
TC2N tandem C2 domains, nuclear 0.0233451
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0232951
KRT8 keratin 8, type II 0.0232873
OAS1 2'-5'-oligoadenylate synthetase 1, 40/46kDa 0.0231203
RPS3 ribosomal protein S3 0.0230326

decreased expression

Symbol Name Standardized Value
EPSTI1 epithelial stromal interaction 1 (breast) -0.0941498
TXNIP thioredoxin interacting protein -0.0938163
UBR2 ubiquitin protein ligase E3 component n-recognin 2 -0.0904624
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0867394
IFNGR1 interferon gamma receptor 1 -0.0840214
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0751947
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0749601
RNF213 ring finger protein 213 -0.0729959
PDIA3 protein disulfide isomerase family A, member 3 -0.0681293
BTBD9 BTB (POZ) domain containing 9 -0.0675204
C6ORF132 chromosome 6 open reading frame 132 -0.0656307
NCKAP5 NCK-associated protein 5 -0.0639085
CLTC clathrin, heavy chain (Hc) -0.0629386
RABGAP1L RAB GTPase activating protein 1-like -0.0603197
RUNX1 runt-related transcription factor 1 -0.0585134
NRIP1 nuclear receptor interacting protein 1 -0.0549423
BRD4 bromodomain containing 4 -0.0542602
FNDC3A fibronectin type III domain containing 3A -0.0539474
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0537503
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0536515
RNF43 ring finger protein 43 -0.0528292
EPCAM epithelial cell adhesion molecule -0.052255
PARP9 poly (ADP-ribose) polymerase family, member 9 -0.0504323
TJP1 tight junction protein 1 -0.0501542
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0497572
MX2 MX dynamin-like GTPase 2 -0.0489808
ERBIN erbb2 interacting protein -0.0484768
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0479588
MACC1 metastasis associated in colon cancer 1 -0.0477921
TM9SF2 transmembrane 9 superfamily member 2 -0.0471856
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0469725
ZDHHC20 zinc finger, DHHC-type containing 20 -0.0460216
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0445524
FNDC3B fibronectin type III domain containing 3B -0.0436571
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0434051
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0433914
SAMD12 sterile alpha motif domain containing 12 -0.0433142
LPP LIM domain containing preferred translocation partner in lipoma -0.0431311
STK24 serine/threonine kinase 24 -0.042917
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.042698
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0425134
BCL2L1 BCL2-like 1 -0.0423242
LCN2 lipocalin 2 -0.0420837
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0413251
POTEF POTE ankyrin domain family, member F -0.039327
MX1 MX dynamin-like GTPase 1 -0.0374379
TTC3 tetratricopeptide repeat domain 3 -0.0367119
ATP11A ATPase, class VI, type 11A -0.0365847
PUM2 pumilio RNA-binding family member 2 -0.036415
MAP7 microtubule-associated protein 7 -0.0362419
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.036005
PHC3 polyhomeotic homolog 3 (Drosophila) -0.0356522
ZNFX1 zinc finger, NFX1-type containing 1 -0.0352287
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0349781
ADAR adenosine deaminase, RNA-specific -0.0348993
YAP1 Yes-associated protein 1 -0.034804
SEL1L sel-1 suppressor of lin-12-like (C. elegans) -0.034361
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0342383
SREBF2 sterol regulatory element binding transcription factor 2 -0.0341648
LMTK2 lemur tyrosine kinase 2 -0.0340555
KDM2A lysine (K)-specific demethylase 2A -0.033963
SP100 SP100 nuclear antigen -0.0336798
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0334221
PCCA propionyl CoA carboxylase, alpha polypeptide -0.0332133
MRPS10 mitochondrial ribosomal protein S10 -0.0331298
BCLAF1 BCL2-associated transcription factor 1 -0.032391
MACF1 microtubule-actin crosslinking factor 1 -0.0323891
MED13L mediator complex subunit 13-like -0.0319741
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0313957
XPO4 exportin 4 -0.0313799
TRERF1 transcriptional regulating factor 1 -0.0311369
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.030782
FMN1 formin 1 -0.030717
SUPT20H suppressor of Ty 20 homolog (S. cerevisiae) -0.030023
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 -0.0299842
ADNP activity-dependent neuroprotector homeobox -0.0296713
AKAP11 A kinase (PRKA) anchor protein 11 -0.0296593
MCU mitochondrial calcium uniporter -0.0296021
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0294741
NF1 neurofibromin 1 -0.0293788
PICALM phosphatidylinositol binding clathrin assembly protein -0.0289023
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0287287
RIGI RNA sensor RIG-I -0.0286933
DIAPH1 diaphanous-related formin 1 -0.0286493
SGK1 serum/glucocorticoid regulated kinase 1 -0.028559
RBM39 RNA binding motif protein 39 -0.0284425
RBM25 RNA binding motif protein 25 -0.0283169
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0282738
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) -0.0278731
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.0278699
BICRAL BICRA like chromatin remodeling complex associated protein -0.0278498
XAF1 XIAP associated factor 1 -0.0277717
ZNF451 zinc finger protein 451 -0.0275895
FAAH2 fatty acid amide hydrolase 2 -0.0273581
KMT2E lysine (K)-specific methyltransferase 2E -0.0273464
PIAS1 protein inhibitor of activated STAT, 1 -0.027071
SRSF4 serine/arginine-rich splicing factor 4 -0.0270496
XPO1 exportin 1 -0.0270254
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) -0.026998
DSG2 desmoglein 2 -0.0268891