Pentamidine (isethionate)_HCT15 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pentamidine (isethionate) perturbation in HCT15 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pentamidine (isethionate)_HCT15 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.093244
OGA O-GlcNAcase 0.0772481
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0729117
RRM2 ribonucleotide reductase M2 0.0697826
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0689784
HMGB2 high mobility group box 2 0.0666441
GOLGA4 golgin A4 0.0648904
PRRC2C proline-rich coiled-coil 2C 0.0619166
DSCAM Down syndrome cell adhesion molecule 0.0581194
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0576073
MT2A metallothionein 2A 0.0569304
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0562914
PNISR PNN-interacting serine/arginine-rich protein 0.0550502
TPR translocated promoter region, nuclear basket protein 0.0542369
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0522353
RSRC2 arginine/serine-rich coiled-coil 2 0.0521605
RPS3 ribosomal protein S3 0.0499811
RPS12 ribosomal protein S12 0.0483383
KMT2C lysine (K)-specific methyltransferase 2C 0.0476813
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0470104
EIF1 eukaryotic translation initiation factor 1 0.0454659
PCBP2 poly(rC) binding protein 2 0.0448256
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0443254
MBD5 methyl-CpG binding domain protein 5 0.043203
WDPCP WD repeat containing planar cell polarity effector 0.0429527
ANKRD12 ankyrin repeat domain 12 0.042557
CENPF centromere protein F, 350/400kDa 0.0413506
TM9SF3 transmembrane 9 superfamily member 3 0.0409819
RBM25 RNA binding motif protein 25 0.0407578
XRN1 5'-3' exoribonuclease 1 0.0406289
SUCO SUN domain containing ossification factor 0.0392536
TRA2A transformer 2 alpha homolog (Drosophila) 0.0391155
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0384521
TXNRD1 thioredoxin reductase 1 0.0375403
PDE4D phosphodiesterase 4D, cAMP-specific 0.0375041
YBX3 Y box binding protein 3 0.0373486
ZNF654 zinc finger protein 654 0.0369287
NUP58 nucleoporin 58 0.0364685
JMJD1C jumonji domain containing 1C 0.0364447
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0362331
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.035718
ZFAND3 zinc finger, AN1-type domain 3 0.035613
CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 0.03548
FUBP1 far upstream element (FUSE) binding protein 1 0.0353283
YTHDC1 YTH domain containing 1 0.0350559
WSB1 WD repeat and SOCS box containing 1 0.0347847
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0347751
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0331102
CKAP2 cytoskeleton associated protein 2 0.0326709
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0322407
PNN pinin, desmosome associated protein 0.0321537
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0321187
GPBP1 GC-rich promoter binding protein 1 0.0318571
CD46 CD46 molecule, complement regulatory protein 0.0318169
MYO6 myosin VI 0.0315171
ANKRD11 ankyrin repeat domain 11 0.0313282
ESCO1 establishment of sister chromatid cohesion N-acetyltransferase 1 0.0312789
UTRN utrophin 0.0297494
SMC4 structural maintenance of chromosomes 4 0.0297429
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0296754
ANLN anillin, actin binding protein 0.0296743
WDR26 WD repeat domain 26 0.0296302
TMF1 TATA element modulatory factor 1 0.0295027
FANCI Fanconi anemia, complementation group I 0.0294307
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0292817
UQCRB ubiquinol-cytochrome c reductase binding protein 0.0290459
TMEM41B transmembrane protein 41B 0.0289655
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0287013
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0286851
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0284974
KHDC4 KH domain containing 4, pre-mRNA splicing factor 0.0284391
ZNF292 zinc finger protein 292 0.0283996
SET SET nuclear proto-oncogene 0.0283627
YEATS2 YEATS domain containing 2 0.0282431
TMSB4X thymosin beta 4, X-linked 0.0282351
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0282133
THOC2 THO complex 2 0.0281082
ZMYM2 zinc finger, MYM-type 2 0.0279568
RBM26 RNA binding motif protein 26 0.0278321
SFPQ splicing factor proline/glutamine-rich 0.0277963
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0277017
VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae) 0.0276945
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0276595
RPL18 ribosomal protein L18 0.0272162
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0270297
BABAM2 BRISC and BRCA1 A complex member 2 0.0268973
GARS1 glycyl-tRNA synthetase 1 0.0267073
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0266512
KDM6A lysine (K)-specific demethylase 6A 0.0266096
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0265963
STRN3 striatin, calmodulin binding protein 3 0.0265694
RASA2 RAS p21 protein activator 2 0.0263242
NFE2L1 nuclear factor, erythroid 2-like 1 0.025989
DIAPH3 diaphanous-related formin 3 0.0256062
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0256012
CEP95 centrosomal protein 95kDa 0.0253998
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0252882
ATF4 activating transcription factor 4 0.0252516
GSK3B glycogen synthase kinase 3 beta 0.0250495
FAM13B family with sequence similarity 13, member B 0.0249634

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.205602
AHNAK AHNAK nucleoprotein -0.181227
FAT1 FAT atypical cadherin 1 -0.148378
NDRG1 N-myc downstream regulated 1 -0.139798
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.107167
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.100174
POTEF POTE ankyrin domain family, member F -0.0979406
ENO1 enolase 1, (alpha) -0.0924053
ACTG1 actin gamma 1 -0.0921394
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0909933
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0784379
LOC112694756 uncharaterized LOC112694756 -0.0687107
PKM pyruvate kinase, muscle -0.0669722
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0619465
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0609208
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0607974
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0584929
UBC ubiquitin C -0.0558977
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0558089
HMGA1 high mobility group AT-hook 1 -0.0540557
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0535106
CCND1 cyclin D1 -0.0515727
CTBP2 C-terminal binding protein 2 -0.0514624
KRT19 keratin 19, type I -0.0507333
CANX calnexin -0.049656
ESYT2 extended synaptotagmin-like protein 2 -0.0491322
TPT1 tumor protein, translationally-controlled 1 -0.0478674
S100A6 S100 calcium binding protein A6 -0.0471708
EGFR epidermal growth factor receptor -0.0463412
PDIA3 protein disulfide isomerase family A, member 3 -0.0461512
LRPPRC leucine-rich pentatricopeptide repeat containing -0.045067
PARD3 par-3 family cell polarity regulator -0.0447868
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0440693
PATJ PATJ crumbs cell polarity complex component -0.0431413
EGR1 early growth response 1 -0.0426384
LMAN1 lectin, mannose-binding, 1 -0.0423231
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0423142
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0402111
KRT18 keratin 18, type I -0.0399403
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0397286
HDLBP high density lipoprotein binding protein -0.0395795
DIAPH2 diaphanous-related formin 2 -0.0387959
HLA-A major histocompatibility complex, class I, A -0.0385564
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0384876
SPTAN1 spectrin, alpha, non-erythrocytic 1 -0.0384456
RPL7 ribosomal protein L7 -0.0382381
RPS11 ribosomal protein S11 -0.0375869
RPS6 ribosomal protein S6 -0.0370096
TUBA1B tubulin, alpha 1b -0.0369689
FTH1 ferritin, heavy polypeptide 1 -0.0369063
ARF1 ADP-ribosylation factor 1 -0.0362476
SH3BP4 SH3-domain binding protein 4 -0.0352476
DENND1A DENN/MADD domain containing 1A -0.0342871
LDHB lactate dehydrogenase B -0.0336173
ILF3 interleukin enhancer binding factor 3, 90kDa -0.0330064
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0329368
RAB1A RAB1A, member RAS oncogene family -0.032917
SERINC5 serine incorporator 5 -0.0322829
RPL35 ribosomal protein L35 -0.031993
MKI67 marker of proliferation Ki-67 -0.0317432
KDM7A lysine (K)-specific demethylase 7A -0.0315027
BACE2 beta-site APP-cleaving enzyme 2 -0.0314985
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0314255
RPLP0 ribosomal protein, large, P0 -0.0311369
SRP72 signal recognition particle 72kDa -0.0308223
MTDH metadherin -0.030681
IGFBP4 insulin-like growth factor binding protein 4 -0.0304419
PAICS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase -0.0296056
LRRC23 leucine rich repeat containing 23 -0.0294946
HMGA2 high mobility group AT-hook 2 -0.0294036
DSG2 desmoglein 2 -0.0292978
RPS14 ribosomal protein S14 -0.0292315
INTS6 integrator complex subunit 6 -0.0290181
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.029006
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0289565
FDPS farnesyl diphosphate synthase -0.0286221
TPM4 tropomyosin 4 -0.0284464
IFITM3 interferon induced transmembrane protein 3 -0.0279429
WWC2 WW and C2 domain containing 2 -0.0278581
HMGB1 high mobility group box 1 -0.0277523
SBNO1 strawberry notch homolog 1 (Drosophila) -0.0277196
JUN jun proto-oncogene -0.0276387
MORF4L2 mortality factor 4 like 2 -0.0275748
RPL38 ribosomal protein L38 -0.02756
RPLP1 ribosomal protein, large, P1 -0.0274218
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0273054
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0271809
TUBB tubulin, beta class I -0.0271727
INSIG1 insulin induced gene 1 -0.0269655
RPS16 ribosomal protein S16 -0.0269341
SPDYA speedy/RINGO cell cycle regulator family member A -0.0266636
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0266324
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0265307
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0265275
SUN1 Sad1 and UNC84 domain containing 1 -0.0262311
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0261458
MLLT6 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 -0.0260866
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0260379
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 -0.0256058
EREG epiregulin -0.0253936