Pentamidine (isethionate)_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pentamidine (isethionate) perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pentamidine (isethionate)_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.113679
RPS12 ribosomal protein S12 0.0692469
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0655738
B2M beta-2-microglobulin 0.0602483
RPS8 ribosomal protein S8 0.0552517
RPL37A ribosomal protein L37a 0.049826
RPL9 ribosomal protein L9 0.0487524
RPS3 ribosomal protein S3 0.0413189
CD46 CD46 molecule, complement regulatory protein 0.0397179
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0395517
RPS2 ribosomal protein S2 0.0365678
RPL36 ribosomal protein L36 0.0319711
FTL ferritin, light polypeptide 0.0318138
AREG amphiregulin 0.029881
KTN1 kinectin 1 (kinesin receptor) 0.0287897
NDRG1 N-myc downstream regulated 1 0.0275534
CEMIP cell migration inducing protein, hyaluronan binding 0.0260271
RPS29 ribosomal protein S29 0.0255214
TPM3 tropomyosin 3 0.0229412
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0227047
MCL1 myeloid cell leukemia 1 0.0226777
PLAUR plasminogen activator, urokinase receptor 0.021963
RPS6 ribosomal protein S6 0.0213758
TMSB4X thymosin beta 4, X-linked 0.020944
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0208617
PNN pinin, desmosome associated protein 0.0205126
VCL vinculin 0.0204265
FOSL1 FOS-like antigen 1 0.0203103
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.020302
COX6C cytochrome c oxidase subunit VIc 0.0190829
RPS27 ribosomal protein S27 0.0190337
RPL21 ribosomal protein L21 0.0188927
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0187305
RPS25 ribosomal protein S25 0.0186666
RPS17 ribosomal protein S17 0.018102
TUBB4B tubulin, beta 4B class IVb 0.0177239
PLEC plectin 0.0166561
ERRFI1 ERBB receptor feedback inhibitor 1 0.0165318
EZR ezrin 0.0162698
UQCRB ubiquinol-cytochrome c reductase binding protein 0.0161931
JUP junction plakoglobin 0.0160913
CCNY cyclin Y 0.0160478
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0159799
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0159491
SRSF5 serine/arginine-rich splicing factor 5 0.015575
RPS19 ribosomal protein S19 0.015484
RPL13A ribosomal protein L13a 0.0154678
ITPRID2 ITPR interacting domain containing 2 0.0152951
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.015226
RPL36A ribosomal protein L36a 0.0150335
RAN RAN, member RAS oncogene family 0.015026
NAP1L1 nucleosome assembly protein 1-like 1 0.0149702
RPS13 ribosomal protein S13 0.014948
TPM4 tropomyosin 4 0.0149399
UBA6 ubiquitin-like modifier activating enzyme 6 0.0148656
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0147153
NDUFB4 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa 0.0146985
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.01453
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0144623
PDCD5 programmed cell death 5 0.0143656
ENO2 enolase 2 (gamma, neuronal) 0.0142643
DHRS2 dehydrogenase/reductase (SDR family) member 2 0.0140727
TNS4 tensin 4 0.0140459
RPL31 ribosomal protein L31 0.0140137
IER2 immediate early response 2 0.0137493
VIM vimentin 0.0136737
RPL3 ribosomal protein L3 0.0133249
DNM2 dynamin 2 0.0131712
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0131032
CENPF centromere protein F, 350/400kDa 0.0129024
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 0.012801
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0126747
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.0125052
DUSP6 dual specificity phosphatase 6 0.0124948
RPL14 ribosomal protein L14 0.0123736
RPL23 ribosomal protein L23 0.0123284
SOD1 superoxide dismutase 1, soluble 0.0121672
SET SET nuclear proto-oncogene 0.0121551
EPHA2 EPH receptor A2 0.0121387
HDGF hepatoma-derived growth factor 0.0121039
SRRM2 serine/arginine repetitive matrix 2 0.0120653
MICOS10 mitochondrial contact site and cristae organizing system subunit 10 0.0118571
CXCL8 chemokine (C-X-C motif) ligand 8 0.0117948
RPL7A ribosomal protein L7a 0.0117926
B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 0.0117879
AKAP9 A kinase (PRKA) anchor protein 9 0.0117711
ARRDC3 arrestin domain containing 3 0.011771
EGR1 early growth response 1 0.0117339
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.011715
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0116928
TRA2A transformer 2 alpha homolog (Drosophila) 0.0115875
SMC4 structural maintenance of chromosomes 4 0.0113965
FAM13A family with sequence similarity 13, member A 0.011388
RPS26 ribosomal protein S26 0.0112649
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0111986
ARLN allregulin 0.0111579
NMU neuromedin U 0.0110608
NCAPG2 non-SMC condensin II complex, subunit G2 0.0109498
CENPE centromere protein E, 312kDa 0.0107832
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor 0.0107524

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.179363
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.149209
NPSR1 neuropeptide S receptor 1 -0.136635
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.124635
AHNAK AHNAK nucleoprotein -0.113232
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.108328
ALCAM activated leukocyte cell adhesion molecule -0.0799127
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0717765
ANXA2 annexin A2 -0.071042
TPT1 tumor protein, translationally-controlled 1 -0.0671621
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0663444
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0613545
ACTG1 actin gamma 1 -0.0609811
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0571414
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0563271
TMSB10 thymosin beta 10 -0.0555269
PIGR polymeric immunoglobulin receptor -0.0526155
GPHN gephyrin -0.0518555
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0513122
FAT1 FAT atypical cadherin 1 -0.0511676
DSG2 desmoglein 2 -0.0509802
LOC112694756 uncharaterized LOC112694756 -0.0503543
KRT8 keratin 8, type II -0.0500576
KRT18 keratin 18, type I -0.0489394
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0488115
S100A6 S100 calcium binding protein A6 -0.0477016
H1-0 H1.0 linker histone -0.0472868
GMDS GDP-mannose 4,6-dehydratase -0.0458377
AGR2 anterior gradient 2 -0.0438353
LPP LIM domain containing preferred translocation partner in lipoma -0.0424595
EPCAM epithelial cell adhesion molecule -0.0419292
MAML3 mastermind-like 3 (Drosophila) -0.0401401
MYO1E myosin IE -0.0398766
ZBTB20 zinc finger and BTB domain containing 20 -0.0389719
FHIT fragile histidine triad -0.0389623
MED13 mediator complex subunit 13 -0.0389024
ANTXR2 anthrax toxin receptor 2 -0.0388655
CANX calnexin -0.0388197
ONECUT3 one cut homeobox 3 -0.0387387
DIAPH2 diaphanous-related formin 2 -0.0386953
UBC ubiquitin C -0.0382489
DSCAM Down syndrome cell adhesion molecule -0.0380848
ABLIM1 actin binding LIM protein 1 -0.0379571
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0370493
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0357692
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0354903
FTH1 ferritin, heavy polypeptide 1 -0.0349186
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0348277
GREB1L growth regulation by estrogen in breast cancer-like -0.0346539
DSPP dentin sialophosphoprotein -0.0343284
CCND1 cyclin D1 -0.0341023
MUC6 mucin 6, oligomeric mucus/gel-forming -0.0337258
HDLBP high density lipoprotein binding protein -0.0330555
POF1B premature ovarian failure, 1B -0.0330363
NFIA nuclear factor I/A -0.0327116
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0323264
PARD3 par-3 family cell polarity regulator -0.0311981
ACTN4 actinin, alpha 4 -0.0311467
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0309112
PATJ PATJ crumbs cell polarity complex component -0.0307054
RIGI RNA sensor RIG-I -0.0303469
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0301674
NALF1 NALCN channel auxiliary factor 1 -0.0300216
CADPS Ca++-dependent secretion activator -0.029693
RAB1A RAB1A, member RAS oncogene family -0.029652
RPL34 ribosomal protein L34 -0.029401
EHBP1 EH domain binding protein 1 -0.0291146
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0289919
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0285915
EXT1 exostosin glycosyltransferase 1 -0.0283855
TFF1 trefoil factor 1 -0.0281458
PDE4D phosphodiesterase 4D, cAMP-specific -0.0278679
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.027761
SAMD5 sterile alpha motif domain containing 5 -0.027376
CDK6 cyclin-dependent kinase 6 -0.0272919
LMO7 LIM domain 7 -0.0272782
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0270662
NCOR1 nuclear receptor corepressor 1 -0.0269813
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0268963
TTC3 tetratricopeptide repeat domain 3 -0.0267259
PDIA3 protein disulfide isomerase family A, member 3 -0.0266865
SBF2 SET binding factor 2 -0.0266503
CCSER1 coiled-coil serine-rich protein 1 -0.0266167
SMYD3 SET and MYND domain containing 3 -0.0265725
PTPRK protein tyrosine phosphatase, receptor type, K -0.02647
HMGB1 high mobility group box 1 -0.0263705
MUC17 mucin 17, cell surface associated -0.0263355
PGK1 phosphoglycerate kinase 1 -0.0262773
FOXP1 forkhead box P1 -0.0262654
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0260513
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0260272
SLC35F3 solute carrier family 35, member F3 -0.0259792
RSL1D1 ribosomal L1 domain containing 1 -0.0259351
IARS1 isoleucyl-tRNA synthetase 1 -0.0258217
MECOM MDS1 and EVI1 complex locus -0.0256617
FLNB filamin B, beta -0.0255706
MSI2 musashi RNA-binding protein 2 -0.0255259
KRT19 keratin 19, type I -0.0254993
GRB10 growth factor receptor-bound protein 10 -0.0250317
RPLP0 ribosomal protein, large, P0 -0.0248649