Pentamidine (isethionate)_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pentamidine (isethionate) perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pentamidine (isethionate)_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.135437
PTMA prothymosin, alpha 0.110581
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0878995
KTN1 kinectin 1 (kinesin receptor) 0.0708848
EZR ezrin 0.0703637
RAI1 retinoic acid induced 1 0.0660684
TMSB4X thymosin beta 4, X-linked 0.0642748
DPYD dihydropyrimidine dehydrogenase 0.0620001
MT2A metallothionein 2A 0.0555775
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0545859
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0538909
DST dystonin 0.0535436
EFNA5 ephrin-A5 0.0523672
PTPRF protein tyrosine phosphatase, receptor type, F 0.0513911
BCAR3 breast cancer anti-estrogen resistance 3 0.0502914
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0492376
IFI6 interferon, alpha-inducible protein 6 0.0483433
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.045067
CAPRIN2 caprin family member 2 0.0438469
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0427826
SET SET nuclear proto-oncogene 0.0425664
PLK2 polo-like kinase 2 0.0412309
PSD3 pleckstrin and Sec7 domain containing 3 0.0403642
TPM4 tropomyosin 4 0.0388498
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0383208
ENO1 enolase 1, (alpha) 0.0372946
ANTXR2 anthrax toxin receptor 2 0.0368559
B2M beta-2-microglobulin 0.0362851
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0362008
F2R coagulation factor II (thrombin) receptor 0.0356817
RAD50 RAD50 homolog (S. cerevisiae) 0.0352967
VIM vimentin 0.0349584
SRSF11 serine/arginine-rich splicing factor 11 0.0344952
RAD51B RAD51 paralog B 0.0339898
EPHA4 EPH receptor A4 0.0324114
PRRC2C proline-rich coiled-coil 2C 0.0323556
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0322042
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0318534
AHNAK2 AHNAK nucleoprotein 2 0.0315778
RPS3 ribosomal protein S3 0.0311248
RIGI RNA sensor RIG-I 0.0311043
RPS12 ribosomal protein S12 0.0310895
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0302885
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0301242
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0301171
CFAP299 cilia and flagella associated protein 299 0.0299791
FTL ferritin, light polypeptide 0.0298701
MOK MOK protein kinase 0.0293283
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0292904
TTC3 tetratricopeptide repeat domain 3 0.0287761
CADM2 cell adhesion molecule 2 0.0283265
RAB27B RAB27B, member RAS oncogene family 0.0282857
OSBPL8 oxysterol binding protein-like 8 0.0278579
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0275752
SYT1 synaptotagmin I 0.027574
PUS7 pseudouridylate synthase 7 (putative) 0.0273238
TSC22D1 TSC22 domain family, member 1 0.0270131
AKAP9 A kinase (PRKA) anchor protein 9 0.0268296
NPEPPS aminopeptidase puromycin sensitive 0.0266496
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0266439
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0262101
PDGFC platelet derived growth factor C 0.0258768
TPR translocated promoter region, nuclear basket protein 0.02586
ADGRG6 adhesion G protein-coupled receptor G6 0.0258512
FMNL2 formin-like 2 0.0251992
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0245635
NR2F1 nuclear receptor subfamily 2, group F, member 1 0.0240339
DLG1 discs, large homolog 1 (Drosophila) 0.023957
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0238499
ANGPTL4 angiopoietin-like 4 0.0238023
SOCS6 suppressor of cytokine signaling 6 0.0235529
DYNC2I1 dynein 2 intermediate chain 1 0.0233162
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 0.0228461
CDK19 cyclin-dependent kinase 19 0.0223395
CANX calnexin 0.0223005
UBE2E3 ubiquitin-conjugating enzyme E2E 3 0.0222333
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0222136
GPBP1 GC-rich promoter binding protein 1 0.0221127
GTF2I general transcription factor IIi 0.021986
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0218257
AVL9 AVL9 homolog (S. cerevisiase) 0.0218071
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0215006
RASAL2 RAS protein activator like 2 0.0213833
RUNX1 runt-related transcription factor 1 0.0210637
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0205781
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0201011
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0200893
ADAM10 ADAM metallopeptidase domain 10 0.0200194
THOC2 THO complex 2 0.0200048
LPP LIM domain containing preferred translocation partner in lipoma 0.019687
MBTD1 mbt domain containing 1 0.0195339
GPAT3 glycerol-3-phosphate acyltransferase 3 0.019421
HDAC8 histone deacetylase 8 0.0191239
INVS inversin 0.0189981
FNBP4 formin binding protein 4 0.0183604
CALB2 calbindin 2 0.0183363
KDM5B lysine (K)-specific demethylase 5B 0.018273
TMF1 TATA element modulatory factor 1 0.0180021
ACBD3 acyl-CoA binding domain containing 3 0.0179875
TRERF1 transcriptional regulating factor 1 0.017638

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.377387
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.162802
TM4SF1 transmembrane 4 L six family member 1 -0.121611
FTH1 ferritin, heavy polypeptide 1 -0.10147
TMSB10 thymosin beta 10 -0.0898391
SPAG9 sperm associated antigen 9 -0.0892219
POTEF POTE ankyrin domain family, member F -0.0870917
WARS1 tryptophanyl-tRNA synthetase 1 -0.0737981
TP63 tumor protein p63 -0.070759
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0669221
EGR1 early growth response 1 -0.065083
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0609837
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0590079
HLA-B major histocompatibility complex, class I, B -0.0587921
LOC112694756 uncharaterized LOC112694756 -0.0575787
KLF6 Kruppel-like factor 6 -0.0550572
TXNRD1 thioredoxin reductase 1 -0.0538831
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0518388
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0516525
ACTG1 actin gamma 1 -0.0508171
RAB7A RAB7A, member RAS oncogene family -0.050744
KMT2E lysine (K)-specific methyltransferase 2E -0.0506937
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0505305
MCTP1 multiple C2 domains, transmembrane 1 -0.0466482
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.045037
LRRC49 leucine rich repeat containing 49 -0.0435898
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0424246
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 -0.0423663
ANXA1 annexin A1 -0.0406609
IARS1 isoleucyl-tRNA synthetase 1 -0.0382802
WWTR1 WW domain containing transcription regulator 1 -0.0381709
GSK3B glycogen synthase kinase 3 beta -0.0377067
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0372661
OLA1 Obg-like ATPase 1 -0.0366483
ZBTB38 zinc finger and BTB domain containing 38 -0.0365021
ZFAND3 zinc finger, AN1-type domain 3 -0.036455
WNK1 WNK lysine deficient protein kinase 1 -0.0357394
ANK2 ankyrin 2, neuronal -0.0356082
UBR4 ubiquitin protein ligase E3 component n-recognin 4 -0.0353736
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0350572
INTS6 integrator complex subunit 6 -0.0348248
NEK10 NIMA-related kinase 10 -0.0344339
UBC ubiquitin C -0.0340936
SLC38A1 solute carrier family 38, member 1 -0.0340691
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0339115
HMGA1 high mobility group AT-hook 1 -0.0334789
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0334222
TGM2 transglutaminase 2 -0.0331838
ANKRD11 ankyrin repeat domain 11 -0.0331472
FBXO11 F-box protein 11 -0.0327936
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0324525
TAPBP TAP binding protein (tapasin) -0.0322954
GLS2 glutaminase 2 (liver, mitochondrial) -0.0322546
ETNK1 ethanolamine kinase 1 -0.0318605
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) -0.0310947
GNAS GNAS complex locus -0.0308444
RPL23 ribosomal protein L23 -0.0306436
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0305382
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0303447
TRIO trio Rho guanine nucleotide exchange factor -0.0302977
TNS3 tensin 3 -0.0302024
HOMER1 homer scaffolding protein 1 -0.0298817
NUP98 nucleoporin 98kDa -0.0295323
USP34 ubiquitin specific peptidase 34 -0.0295157
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 -0.0292119
ARHGAP5 Rho GTPase activating protein 5 -0.029161
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0291161
MYC v-myc avian myelocytomatosis viral oncogene homolog -0.0290947
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.028932
AFF4 AF4/FMR2 family, member 4 -0.0288406
LARP4B La ribonucleoprotein domain family, member 4B -0.0285032
COL5A2 collagen, type V, alpha 2 -0.0284025
RPLP1 ribosomal protein, large, P1 -0.0283332
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 -0.0281291
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0280022
RPL35A ribosomal protein L35a -0.0278918
TMEM41B transmembrane protein 41B -0.0278622
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0276989
LOXL2 lysyl oxidase-like 2 -0.0273391
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase -0.027162
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0271429
NUP58 nucleoporin 58 -0.0268126
RPLP0 ribosomal protein, large, P0 -0.0266713
ZNF217 zinc finger protein 217 -0.0261153
RPS24 ribosomal protein S24 -0.0261004
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0258737
BICD1 bicaudal D homolog 1 (Drosophila) -0.0255714
RPL28 ribosomal protein L28 -0.0255398
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0251508
CD44 CD44 molecule (Indian blood group) -0.0249847
JMJD1C jumonji domain containing 1C -0.0248342
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0247851
RCOR1 REST corepressor 1 -0.0245826
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0245237
IFRD1 interferon-related developmental regulator 1 -0.0242924
ETV5 ets variant 5 -0.024267
GARS1 glycyl-tRNA synthetase 1 -0.0241849
SDK1 sidekick cell adhesion molecule 1 -0.024136
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) -0.0239525
TSC22D2 TSC22 domain family, member 2 -0.0238998