Pentamidine (isethionate)_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pentamidine (isethionate) perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pentamidine (isethionate)_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL5A2 collagen, type V, alpha 2 0.146816
PSD3 pleckstrin and Sec7 domain containing 3 0.136379
VIM vimentin 0.132133
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.108355
B2M beta-2-microglobulin 0.0967883
IGFBP3 insulin-like growth factor binding protein 3 0.095243
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0941082
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0846056
RPS12 ribosomal protein S12 0.0766524
TMX4 thioredoxin-related transmembrane protein 4 0.0756954
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0734906
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0669331
ZEB2 zinc finger E-box binding homeobox 2 0.0568406
KTN1 kinectin 1 (kinesin receptor) 0.0564201
RPS6 ribosomal protein S6 0.0535126
CD109 CD109 molecule 0.0524809
LIMCH1 LIM and calponin homology domains 1 0.0523571
PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit 0.0517607
P3H2 prolyl 3-hydroxylase 2 0.0484065
KIAA0825 KIAA0825 0.0475918
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0469298
SET SET nuclear proto-oncogene 0.045603
PYGL phosphorylase, glycogen, liver 0.0448789
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0447787
CENPF centromere protein F, 350/400kDa 0.0440837
DNER delta/notch-like EGF repeat containing 0.0423062
EEF2 eukaryotic translation elongation factor 2 0.0415721
TMSB4X thymosin beta 4, X-linked 0.0408188
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.040215
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0392122
CHL1 cell adhesion molecule L1-like 0.0390632
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0385886
RPS2 ribosomal protein S2 0.0378688
ENO1 enolase 1, (alpha) 0.0378658
LAMB1 laminin, beta 1 0.0368405
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 0.0366311
SLC16A6 solute carrier family 16, member 6 0.0364805
RPS27 ribosomal protein S27 0.0359973
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0359031
RPL37A ribosomal protein L37a 0.0357574
PRKN parkin RBR E3 ubiquitin protein ligase 0.0351266
MCL1 myeloid cell leukemia 1 0.0344435
MT2A metallothionein 2A 0.0343692
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0341919
TPM3 tropomyosin 3 0.0339479
CTSC cathepsin C 0.0330873
ASTN2 astrotactin 2 0.033047
RPS17 ribosomal protein S17 0.0327999
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0327619
EPB41L3 erythrocyte membrane protein band 4.1-like 3 0.030875
SLC39A8 solute carrier family 39 (zinc transporter), member 8 0.0308234
RPS3 ribosomal protein S3 0.0307295
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0303151
DGKD diacylglycerol kinase, delta 130kDa 0.0300777
UBXN4 UBX domain protein 4 0.0300397
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0298162
AKAP9 A kinase (PRKA) anchor protein 9 0.0297844
LSAMP limbic system-associated membrane protein 0.0296102
RPL3 ribosomal protein L3 0.0294216
CEP350 centrosomal protein 350kDa 0.0293629
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0287253
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0287196
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0284174
SCARA5 scavenger receptor class A, member 5 0.0278623
MSN moesin 0.0278157
TENM2 teneurin transmembrane protein 2 0.0276509
RPS8 ribosomal protein S8 0.0273693
SLK STE20-like kinase 0.0271699
RPL26 ribosomal protein L26 0.0266966
RAI1 retinoic acid induced 1 0.0266584
S100A6 S100 calcium binding protein A6 0.0264389
TNIP1 TNFAIP3 interacting protein 1 0.0262282
RPL18 ribosomal protein L18 0.0261028
RPL5 ribosomal protein L5 0.0259949
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0259924
PTPRD protein tyrosine phosphatase, receptor type, D 0.0258571
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.0256315
GPAT3 glycerol-3-phosphate acyltransferase 3 0.0254913
TENM3 teneurin transmembrane protein 3 0.0249321
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0248774
ANTXR1 anthrax toxin receptor 1 0.0246068
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0246031
RPL21 ribosomal protein L21 0.0245464
HLA-A major histocompatibility complex, class I, A 0.0241582
RABGAP1L RAB GTPase activating protein 1-like 0.0241567
PTEN phosphatase and tensin homolog 0.0238345
SAMD4A sterile alpha motif domain containing 4A 0.023807
INVS inversin 0.0236904
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D 0.0234106
SOX4 SRY (sex determining region Y)-box 4 0.0229993
PDGFA platelet-derived growth factor alpha polypeptide 0.0227695
SLC44A1 solute carrier family 44 (choline transporter), member 1 0.022749
CEP170 centrosomal protein 170kDa 0.0225394
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0225316
DPP10 dipeptidyl-peptidase 10 (non-functional) 0.0223292
RPL14 ribosomal protein L14 0.0219769
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0218575
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0218539
ESM1 endothelial cell-specific molecule 1 0.0215629
PDE7B phosphodiesterase 7B 0.0213996

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.284738
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.130419
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.104507
VCL vinculin -0.0862991
TPT1 tumor protein, translationally-controlled 1 -0.0838206
TM4SF1 transmembrane 4 L six family member 1 -0.0816285
NT5C2 5'-nucleotidase, cytosolic II -0.0706003
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0673596
COL8A1 collagen, type VIII, alpha 1 -0.0669985
PDE4D phosphodiesterase 4D, cAMP-specific -0.0628464
SMYD3 SET and MYND domain containing 3 -0.0615043
RPS24 ribosomal protein S24 -0.0591461
PTMA prothymosin, alpha -0.0587737
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.056463
INTS6 integrator complex subunit 6 -0.0554477
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0523638
SPAG9 sperm associated antigen 9 -0.0519511
NAMPT nicotinamide phosphoribosyltransferase -0.049705
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0472159
ACTG1 actin gamma 1 -0.0464596
ELL2 elongation factor, RNA polymerase II, 2 -0.044963
KYNU kynureninase -0.0436281
TFPI2 tissue factor pathway inhibitor 2 -0.0415086
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0413287
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.040697
FNDC3B fibronectin type III domain containing 3B -0.0402338
VDAC1 voltage-dependent anion channel 1 -0.0402315
RBM39 RNA binding motif protein 39 -0.0401858
SMOC1 SPARC related modular calcium binding 1 -0.0388305
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0379423
IGF1R insulin-like growth factor 1 receptor -0.0377347
TRIO trio Rho guanine nucleotide exchange factor -0.037012
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0365377
HLA-B major histocompatibility complex, class I, B -0.0356671
CREB5 cAMP responsive element binding protein 5 -0.0350974
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0345559
EIF1 eukaryotic translation initiation factor 1 -0.0340972
GMDS GDP-mannose 4,6-dehydratase -0.0333786
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0327786
PUM2 pumilio RNA-binding family member 2 -0.0326751
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0323825
ARF1 ADP-ribosylation factor 1 -0.0320278
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0315134
KDM3A lysine (K)-specific demethylase 3A -0.0312551
NDRG1 N-myc downstream regulated 1 -0.03111
STC1 stanniocalcin 1 -0.0307265
SQSTM1 sequestosome 1 -0.030535
NCOA7 nuclear receptor coactivator 7 -0.0304602
SMAD2 SMAD family member 2 -0.0303702
ADGRD1 adhesion G protein-coupled receptor D1 -0.0300115
PM20D1 peptidase M20 domain containing 1 -0.02986
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0294467
FMNL2 formin-like 2 -0.0293845
UBC ubiquitin C -0.0288763
USP3 ubiquitin specific peptidase 3 -0.0287001
RPL38 ribosomal protein L38 -0.0284304
RPLP1 ribosomal protein, large, P1 -0.0282045
RAB31 RAB31, member RAS oncogene family -0.0280496
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -0.0277321
MARCHF6 membrane associated ring-CH-type finger 6 -0.0277098
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0274212
NAP1L1 nucleosome assembly protein 1-like 1 -0.0272548
IFRD1 interferon-related developmental regulator 1 -0.0271077
MED13 mediator complex subunit 13 -0.026898
OGA O-GlcNAcase -0.0263207
PDLIM5 PDZ and LIM domain 5 -0.0254478
IARS1 isoleucyl-tRNA synthetase 1 -0.0252686
ZFAND3 zinc finger, AN1-type domain 3 -0.0249332
MAML3 mastermind-like 3 (Drosophila) -0.0246919
RPL35A ribosomal protein L35a -0.024374
NABP1 nucleic acid binding protein 1 -0.0240798
TFRC transferrin receptor -0.0239331
RAB1A RAB1A, member RAS oncogene family -0.0234596
SH3KBP1 SH3-domain kinase binding protein 1 -0.023064
NUP58 nucleoporin 58 -0.0230423
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0229652
GARS1 glycyl-tRNA synthetase 1 -0.0229239
DSCAM Down syndrome cell adhesion molecule -0.0225666
TSC22D2 TSC22 domain family, member 2 -0.0222882
RAP1B RAP1B, member of RAS oncogene family -0.0222719
STAU1 staufen double-stranded RNA binding protein 1 -0.0221132
GLS2 glutaminase 2 (liver, mitochondrial) -0.0220367
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0219184
NALF1 NALCN channel auxiliary factor 1 -0.021618
BMP6 bone morphogenetic protein 6 -0.0215775
LMAN1 lectin, mannose-binding, 1 -0.0215441
WSB1 WD repeat and SOCS box containing 1 -0.0215369
WDR43 WD repeat domain 43 -0.0214569
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0212559
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0212179
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0211461
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0210508
UBAP2 ubiquitin associated protein 2 -0.0209699
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0208823
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0207201
RALY RALY heterogeneous nuclear ribonucleoprotein -0.0205348
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0204853
FOXK1 forkhead box K1 -0.0203094
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0202711
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0202324