Pentamidine (isethionate)_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pentamidine (isethionate) perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pentamidine (isethionate)_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.145622
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.100383
HDAC9 histone deacetylase 9 0.0938603
ZNF292 zinc finger protein 292 0.0654949
KMT2C lysine (K)-specific methyltransferase 2C 0.0653944
TRPS1 trichorhinophalangeal syndrome I 0.0636384
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0620271
ADGRL3 adhesion G protein-coupled receptor L3 0.0567964
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0541716
PGAP1 post-GPI attachment to proteins 1 0.0525528
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 0.0511334
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0508808
SAMD4A sterile alpha motif domain containing 4A 0.0507021
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0504816
SRP54 signal recognition particle 54kDa 0.050275
EVI5 ecotropic viral integration site 5 0.0459389
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0448948
FAM168A family with sequence similarity 168, member A 0.044021
B2M beta-2-microglobulin 0.0424135
ELF2 E74-like factor 2 (ets domain transcription factor) 0.0402168
NFIA nuclear factor I/A 0.0395147
ARL13B ADP-ribosylation factor-like 13B 0.0392169
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.03914
USP25 ubiquitin specific peptidase 25 0.0370337
CMSS1 cms1 ribosomal small subunit homolog (yeast) 0.036287
BRAF B-Raf proto-oncogene, serine/threonine kinase 0.0357612
CDC73 cell division cycle 73 0.0356226
SPIRE1 spire-type actin nucleation factor 1 0.0352247
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0348285
DST dystonin 0.0345905
DLG1 discs, large homolog 1 (Drosophila) 0.033968
ANK2 ankyrin 2, neuronal 0.0338213
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0336154
ZEB2 zinc finger E-box binding homeobox 2 0.0331689
RCOR1 REST corepressor 1 0.0327371
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0319333
CAMKMT calmodulin-lysine N-methyltransferase 0.0310856
PRR16 proline rich 16 0.0307961
SUCO SUN domain containing ossification factor 0.0305573
BIRC6 baculoviral IAP repeat containing 6 0.0304309
BCLAF1 BCL2-associated transcription factor 1 0.0303906
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0300652
GSK3B glycogen synthase kinase 3 beta 0.0300124
SYT1 synaptotagmin I 0.0298667
PHF3 PHD finger protein 3 0.0298354
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0293772
COA1 cytochrome c oxidase assembly factor 1 homolog (S. cerevisiae) 0.0291987
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0289975
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0288616
SEC63 SEC63 homolog (S. cerevisiae) 0.0279827
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0279172
RBM26 RNA binding motif protein 26 0.0277729
ZFAND3 zinc finger, AN1-type domain 3 0.0272575
MAPK8 mitogen-activated protein kinase 8 0.0272567
CTNNA3 catenin (cadherin-associated protein), alpha 3 0.0271124
LPIN2 lipin 2 0.0270756
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 0.0270617
PNN pinin, desmosome associated protein 0.0270366
PHF21A PHD finger protein 21A 0.0268651
NAV3 neuron navigator 3 0.0267864
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) 0.0265795
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0262541
GTDC1 glycosyltransferase-like domain containing 1 0.0261845
BNC2 basonuclin 2 0.0261176
IWS1 IWS1 homolog (S. cerevisiae) 0.0255265
SATB2 SATB homeobox 2 0.0253465
ABCD3 ATP-binding cassette, sub-family D (ALD), member 3 0.0251333
COG5 component of oligomeric golgi complex 5 0.0250452
FIGN fidgetin 0.0249604
SMYD3 SET and MYND domain containing 3 0.0248256
TENT4A terminal nucleotidyltransferase 4A 0.0247699
KTN1 kinectin 1 (kinesin receptor) 0.0246955
SRPK2 SRSF protein kinase 2 0.0246072
LCOR ligand dependent nuclear receptor corepressor 0.0245539
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0244629
PARD3B par-3 family cell polarity regulator beta 0.0244115
PIAS2 protein inhibitor of activated STAT, 2 0.024352
FNIP1 folliculin interacting protein 1 0.0237831
BRWD1 bromodomain and WD repeat domain containing 1 0.0236584
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.023608
SMAD4 SMAD family member 4 0.0235818
RBM28 RNA binding motif protein 28 0.0234949
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein 0.0233641
NUMB numb homolog (Drosophila) 0.023344
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0231762
UBE2H ubiquitin-conjugating enzyme E2H 0.0229909
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0229011
KDM6A lysine (K)-specific demethylase 6A 0.0228043
JMJD1C jumonji domain containing 1C 0.022601
CELF1 CUGBP, Elav-like family member 1 0.0224961
PRRC2C proline-rich coiled-coil 2C 0.0223373
ZCCHC7 zinc finger, CCHC domain containing 7 0.0220753
SPTY2D1 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) 0.0219442
PLEKHM3 pleckstrin homology domain containing, family M, member 3 0.0218692
PPM1B protein phosphatase, Mg2+/Mn2+ dependent, 1B 0.0216624
EFNA5 ephrin-A5 0.0215796
RDX radixin 0.0215223
CEP192 centrosomal protein 192kDa 0.0214187
XPO1 exportin 1 0.0213691
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0213633

decreased expression

Symbol Name Standardized Value
COL11A1 collagen, type XI, alpha 1 -0.156494
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.149851
PCDH9 protocadherin 9 -0.12133
TMSB10 thymosin beta 10 -0.107336
COL5A2 collagen, type V, alpha 2 -0.105494
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.101872
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.101431
PCLO piccolo presynaptic cytomatrix protein -0.0998319
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0924359
ACTG1 actin gamma 1 -0.0862028
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0827694
NTM neurotrimin -0.0822758
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0820489
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0817034
PEG10 paternally expressed 10 -0.0779906
PHIP pleckstrin homology domain interacting protein -0.0716748
AHNAK AHNAK nucleoprotein -0.0709223
PDIA3 protein disulfide isomerase family A, member 3 -0.0649695
RPS16 ribosomal protein S16 -0.0625231
H1-0 H1.0 linker histone -0.060176
TSC22D2 TSC22 domain family, member 2 -0.0579161
ATP5F1B ATP synthase F1 subunit beta -0.0555476
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0553119
ADGRL2 adhesion G protein-coupled receptor L2 -0.054407
LOC102724023 ES1 protein homolog, mitochondrial -0.0533371
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.052986
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0528723
COL1A2 collagen, type I, alpha 2 -0.05194
RPS8 ribosomal protein S8 -0.0517947
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0510023
MDK midkine (neurite growth-promoting factor 2) -0.0490369
GNAS GNAS complex locus -0.0480505
SOX2 SRY (sex determining region Y)-box 2 -0.0480105
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0467212
RPS27A ribosomal protein S27a -0.0462449
SFRP4 secreted frizzled-related protein 4 -0.0457481
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0450101
CADM2 cell adhesion molecule 2 -0.0450015
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.044759
KDM5B lysine (K)-specific demethylase 5B -0.0445501
SLIT2 slit homolog 2 (Drosophila) -0.0441485
BAZ2A bromodomain adjacent to zinc finger domain, 2A -0.043258
RPLP1 ribosomal protein, large, P1 -0.0432133
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.042658
WNK1 WNK lysine deficient protein kinase 1 -0.0423233
COL3A1 collagen, type III, alpha 1 -0.0423105
EMP1 epithelial membrane protein 1 -0.042177
THBS1 thrombospondin 1 -0.0419819
ENO1 enolase 1, (alpha) -0.041607
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0411499
CENPF centromere protein F, 350/400kDa -0.0408853
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0408153
LDHA lactate dehydrogenase A -0.0407389
PRELID2 PRELI domain containing 2 -0.0398509
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.039443
FOXG1 forkhead box G1 -0.0389946
VIM vimentin -0.0389415
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1 -0.0386457
RNF213 ring finger protein 213 -0.0384444
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0380001
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0379446
MKI67 marker of proliferation Ki-67 -0.0379167
CAVIN1 caveolae associated protein 1 -0.0375502
RPLP0 ribosomal protein, large, P0 -0.0370606
NPAS3 neuronal PAS domain protein 3 -0.0368162
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0367682
FTL ferritin, light polypeptide -0.0360565
NSD2 nuclear receptor binding SET domain protein 2 -0.0359397
SLC30A8 solute carrier family 30 (zinc transporter), member 8 -0.0356491
POTEF POTE ankyrin domain family, member F -0.034947
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0348684
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0345139
RPS6 ribosomal protein S6 -0.0341986
POU3F2 POU class 3 homeobox 2 -0.0340007
RBM39 RNA binding motif protein 39 -0.0335989
FST follistatin -0.0335734
DENND5B DENN/MADD domain containing 5B -0.0335604
WSB1 WD repeat and SOCS box containing 1 -0.0333064
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0326423
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0325607
RPL28 ribosomal protein L28 -0.0325164
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0314816
GSE1 Gse1 coiled-coil protein -0.0312471
WASF2 WAS protein family, member 2 -0.0312293
RPN2 ribophorin II -0.0309629
RAD51B RAD51 paralog B -0.0308016
RAB31 RAB31, member RAS oncogene family -0.0307557
PFN1 profilin 1 -0.0305653
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0298488
MARCHF6 membrane associated ring-CH-type finger 6 -0.0294225
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0292277
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein -0.0288476
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.028802
RPL30 ribosomal protein L30 -0.0287688
PPP4R3B protein phosphatase 4 regulatory subunit 3B -0.0285444
SERF2 small EDRK-rich factor 2 -0.0284857
NBAS neuroblastoma amplified sequence -0.0281689
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.027934
BRDT bromodomain, testis-specific -0.0274683
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 -0.0271862