Pentamidine (isethionate)_RPMI-7951 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pentamidine (isethionate) perturbation in RPMI-7951 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pentamidine (isethionate)_RPMI-7951 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0404477
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0327624
B2M beta-2-microglobulin 0.0323868
LDHA lactate dehydrogenase A 0.0280811
ANGPTL4 angiopoietin-like 4 0.0279125
IFI6 interferon, alpha-inducible protein 6 0.026407
AKAP12 A kinase (PRKA) anchor protein 12 0.0249419
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0226568
STC1 stanniocalcin 1 0.0225974
RPS12 ribosomal protein S12 0.0218846
MT2A metallothionein 2A 0.021417
HLA-E major histocompatibility complex, class I, E 0.0205962
TPT1 tumor protein, translationally-controlled 1 0.0199055
RPL35A ribosomal protein L35a 0.0198384
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0186742
RPL37A ribosomal protein L37a 0.0182927
CDCP1 CUB domain containing protein 1 0.0181775
EIF1 eukaryotic translation initiation factor 1 0.0174445
RPS25 ribosomal protein S25 0.0172595
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0172583
RPS3 ribosomal protein S3 0.0171104
EEF2 eukaryotic translation elongation factor 2 0.0168372
RPL11 ribosomal protein L11 0.0161586
IRF2BP2 interferon regulatory factor 2 binding protein 2 0.0158595
RACK1 receptor for activated C kinase 1 0.0152251
SERINC1 serine incorporator 1 0.0149239
FAT1 FAT atypical cadherin 1 0.0147532
RPS8 ribosomal protein S8 0.0147168
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0130522
RPL26 ribosomal protein L26 0.0130003
RPL31 ribosomal protein L31 0.0123692
AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 0.0122762
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0121135
FGFR1 fibroblast growth factor receptor 1 0.0118119
RPL36 ribosomal protein L36 0.0117888
RSL1D1 ribosomal L1 domain containing 1 0.011736
NR6A1 nuclear receptor subfamily 6, group A, member 1 0.0116507
NAP1L1 nucleosome assembly protein 1-like 1 0.0114952
TPM3 tropomyosin 3 0.0114457
RPL10A ribosomal protein L10a 0.0111135
PTPRF protein tyrosine phosphatase, receptor type, F 0.0110205
RPS27 ribosomal protein S27 0.0109677
RPS20 ribosomal protein S20 0.0109622
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0109376
HLA-A major histocompatibility complex, class I, A 0.010837
RPL3 ribosomal protein L3 0.0107171
TRIM56 tripartite motif containing 56 0.0106505
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0104205
RPL13A ribosomal protein L13a 0.0104186
RPL5 ribosomal protein L5 0.0102007
ARRDC3 arrestin domain containing 3 0.0101439
PPIG peptidylprolyl isomerase G (cyclophilin G) 0.00995185
EZR ezrin 0.00989998
RPS19 ribosomal protein S19 0.00977515
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) 0.00970302
BRD2 bromodomain containing 2 0.00967818
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.00967686
RPS24 ribosomal protein S24 0.00962785
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.00950805
RPL37 ribosomal protein L37 0.00942966
SLC39A11 solute carrier family 39, member 11 0.00937147
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.00929995
AXL AXL receptor tyrosine kinase 0.00926462
TMSB4X thymosin beta 4, X-linked 0.0091743
DDIT4 DNA-damage-inducible transcript 4 0.00916671
SLC35F5 solute carrier family 35, member F5 0.00903899
NRBP1 nuclear receptor binding protein 1 0.008992
DICER1 dicer 1, ribonuclease type III 0.00890832
LOC112694756 uncharaterized LOC112694756 0.00890789
ITSN2 intersectin 2 0.00889807
APPL1 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 0.00885469
PRELID2 PRELI domain containing 2 0.00884055
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.00876296
SQSTM1 sequestosome 1 0.00868676
RPS17 ribosomal protein S17 0.0086712
SEPTIN10 septin 10 0.0086476
TFPI2 tissue factor pathway inhibitor 2 0.00863102
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 0.00859507
FAM107B family with sequence similarity 107, member B 0.008544
EFNA5 ephrin-A5 0.00852363
RPL15 ribosomal protein L15 0.00851414
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) 0.00848297
SDC4 syndecan 4 0.00847034
RPS16 ribosomal protein S16 0.00838074
EIF3I eukaryotic translation initiation factor 3, subunit I 0.00828833
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.00817967
ARFGEF3 ARFGEF family member 3 0.00807637
CRYBG3 beta-gamma crystallin domain containing 3 0.00804933
PLEC plectin 0.00799642
ZNF160 zinc finger protein 160 0.00795692
RPL27 ribosomal protein L27 0.00795406
ZNF146 zinc finger protein 146 0.00783396
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.00776182
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 0.00775713
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.007748
NCOA1 nuclear receptor coactivator 1 0.0077337
CIRSR corepressor of RBPJ and splicing regulator 0.00769027
HDAC9 histone deacetylase 9 0.00759998
RPL9 ribosomal protein L9 0.00757961
MINDY2 MINDY lysine 48 deubiquitinase 2 0.00757366

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.246893
COL1A1 collagen, type I, alpha 1 -0.11808
FRMD4A FERM domain containing 4A -0.102328
COL1A2 collagen, type I, alpha 2 -0.100097
CD44 CD44 molecule (Indian blood group) -0.0990393
PSD3 pleckstrin and Sec7 domain containing 3 -0.0854066
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0840087
FNDC3B fibronectin type III domain containing 3B -0.0805103
VIM vimentin -0.078844
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0787819
COL6A2 collagen, type VI, alpha 2 -0.0729234
NRP1 neuropilin 1 -0.0714457
TPM1 tropomyosin 1 (alpha) -0.0681945
POTEF POTE ankyrin domain family, member F -0.06569
TMSB10 thymosin beta 10 -0.0654672
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0640605
TNNC1 troponin C type 1 (slow) -0.063243
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0582428
COL7A1 collagen, type VII, alpha 1 -0.0581588
COL6A1 collagen, type VI, alpha 1 -0.0581411
GLIS3 GLIS family zinc finger 3 -0.0568187
CDH13 cadherin 13 -0.054628
EXT1 exostosin glycosyltransferase 1 -0.0536598
ZBTB38 zinc finger and BTB domain containing 38 -0.0519908
NDRG1 N-myc downstream regulated 1 -0.0479077
ZEB1 zinc finger E-box binding homeobox 1 -0.0469477
VEGFA vascular endothelial growth factor A -0.0468758
TIMP3 TIMP metallopeptidase inhibitor 3 -0.044916
CAPZB capping protein (actin filament) muscle Z-line, beta -0.0447013
HLA-B major histocompatibility complex, class I, B -0.0433161
NAV1 neuron navigator 1 -0.0421388
PDE4D phosphodiesterase 4D, cAMP-specific -0.0406313
LOXL2 lysyl oxidase-like 2 -0.0401007
RAB7A RAB7A, member RAS oncogene family -0.0395523
FMNL2 formin-like 2 -0.0394463
LPP LIM domain containing preferred translocation partner in lipoma -0.0393033
PTPRG protein tyrosine phosphatase, receptor type, G -0.0387623
MCTP2 multiple C2 domains, transmembrane 2 -0.0385933
COL5A3 collagen, type V, alpha 3 -0.0384081
TNS3 tensin 3 -0.03752
DSCAM Down syndrome cell adhesion molecule -0.0374313
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.037117
TGFB1 transforming growth factor, beta 1 -0.0343808
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.034211
PKM pyruvate kinase, muscle -0.0335007
TRIO trio Rho guanine nucleotide exchange factor -0.0334109
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0332959
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0326072
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 -0.0321698
SETD5 SET domain containing 5 -0.0320079
HPCAL1 hippocalcin-like 1 -0.0319076
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0317515
INHBA inhibin, beta A -0.0317181
ACTN1 actinin, alpha 1 -0.0313215
VCL vinculin -0.0311814
ZBTB20 zinc finger and BTB domain containing 20 -0.0311432
TMEM178B transmembrane protein 178B -0.0308094
ATP13A3 ATPase type 13A3 -0.030305
MEF2A myocyte enhancer factor 2A -0.0298668
ASPH aspartate beta-hydroxylase -0.0296177
JARID2 jumonji, AT rich interactive domain 2 -0.0293059
TPM4 tropomyosin 4 -0.0291219
COL5A2 collagen, type V, alpha 2 -0.0289377
MSN moesin -0.028905
DLG1 discs, large homolog 1 (Drosophila) -0.0285267
GRB10 growth factor receptor-bound protein 10 -0.0285089
COL4A1 collagen, type IV, alpha 1 -0.0284564
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0283935
MAML2 mastermind-like 2 (Drosophila) -0.0280791
SNAP25 synaptosomal-associated protein, 25kDa -0.0280632
FBXO11 F-box protein 11 -0.0277818
ITGA1 integrin, alpha 1 -0.0276905
FTH1 ferritin, heavy polypeptide 1 -0.0273733
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0271067
RBM39 RNA binding motif protein 39 -0.0267302
CALD1 caldesmon 1 -0.0266565
LOC102724023 ES1 protein homolog, mitochondrial -0.0263465
RUNX1 runt-related transcription factor 1 -0.0263233
SSH1 slingshot protein phosphatase 1 -0.0260929
SH3RF3 SH3 domain containing ring finger 3 -0.0260758
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0260294
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0256763
PTK2 protein tyrosine kinase 2 -0.0250366
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0249707
NAMPT nicotinamide phosphoribosyltransferase -0.024862
ZMYND8 zinc finger, MYND-type containing 8 -0.0248408
ANKRD28 ankyrin repeat domain 28 -0.0247406
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0244493
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.0242905
FNDC3A fibronectin type III domain containing 3A -0.0242886
MACF1 microtubule-actin crosslinking factor 1 -0.0242818
NPAS2 neuronal PAS domain protein 2 -0.0239825
RICTOR RPTOR independent companion of MTOR, complex 2 -0.02379
RIGI RNA sensor RIG-I -0.023786
RRBP1 ribosome binding protein 1 -0.0236716
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0235703
SLIT2 slit homolog 2 (Drosophila) -0.0235132
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0234171
HMGA2 high mobility group AT-hook 2 -0.0233494
PEAK1 pseudopodium-enriched atypical kinase 1 -0.0233111