Pentamidine (isethionate)_SW1417 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pentamidine (isethionate) perturbation in SW1417 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pentamidine (isethionate)_SW1417 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.052536
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.0450841
RPS6 ribosomal protein S6 0.0346825
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.0302108
KMT2E lysine (K)-specific methyltransferase 2E 0.0300033
GOLGA4 golgin A4 0.0266156
MEF2A myocyte enhancer factor 2A 0.0250518
USP3 ubiquitin specific peptidase 3 0.0248489
ZNF292 zinc finger protein 292 0.0241282
RPL14 ribosomal protein L14 0.0234517
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0227025
RNF145 ring finger protein 145 0.0193451
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0190195
CCNL1 cyclin L1 0.0180618
RICTOR RPTOR independent companion of MTOR, complex 2 0.0180221
MTMR3 myotubularin related protein 3 0.017896
SUCO SUN domain containing ossification factor 0.0175575
FAR1 fatty acyl CoA reductase 1 0.0168674
SBF2 SET binding factor 2 0.0167272
TMF1 TATA element modulatory factor 1 0.0165659
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0165111
TRA2A transformer 2 alpha homolog (Drosophila) 0.0164192
MATR3 matrin 3 0.0158485
PNN pinin, desmosome associated protein 0.0157593
RAD23B RAD23 homolog B (S. cerevisiae) 0.015515
MXD1 MAX dimerization protein 1 0.0154943
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 0.0154708
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.015213
ESYT2 extended synaptotagmin-like protein 2 0.0149773
KMT2C lysine (K)-specific methyltransferase 2C 0.0149699
PHKB phosphorylase kinase, beta 0.0148437
TBK1 TANK-binding kinase 1 0.0147817
RPRD2 regulation of nuclear pre-mRNA domain containing 2 0.014668
LCORL ligand dependent nuclear receptor corepressor-like 0.0146151
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.014424
ANO10 anoctamin 10 0.0143636
TMSB4X thymosin beta 4, X-linked 0.0142939
FOXJ3 forkhead box J3 0.0142865
YBX1 Y box binding protein 1 0.0142436
VEZT vezatin, adherens junctions transmembrane protein 0.0141109
PPM1B protein phosphatase, Mg2+/Mn2+ dependent, 1B 0.0137766
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.0131142
RAB6A RAB6A, member RAS oncogene family 0.0130902
ELF2 E74-like factor 2 (ets domain transcription factor) 0.0129506
KTN1 kinectin 1 (kinesin receptor) 0.0129261
TLK2 tousled-like kinase 2 0.0128999
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0128853
TTC3 tetratricopeptide repeat domain 3 0.0127514
GPR107 G protein-coupled receptor 107 0.0124984
OPTN optineurin 0.0124801
GPBP1 GC-rich promoter binding protein 1 0.0124293
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0122731
BIRC6 baculoviral IAP repeat containing 6 0.0121857
RPS2 ribosomal protein S2 0.0121345
YTHDC1 YTH domain containing 1 0.012109
PELI1 pellino E3 ubiquitin protein ligase 1 0.0120725
TM9SF3 transmembrane 9 superfamily member 3 0.0120449
MBOAT2 membrane bound O-acyltransferase domain containing 2 0.0120223
KDM6A lysine (K)-specific demethylase 6A 0.011746
OSBPL9 oxysterol binding protein-like 9 0.0117437
GARS1 glycyl-tRNA synthetase 1 0.0115496
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0114233
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 0.011413
WAC WW domain containing adaptor with coiled-coil 0.0114017
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0113715
PIAS1 protein inhibitor of activated STAT, 1 0.0113263
CCPG1 cell cycle progression 1 0.0113192
UBXN2A UBX domain protein 2A 0.0112686
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0112257
ARF4 ADP-ribosylation factor 4 0.0111488
TFG TRK-fused gene 0.0111179
RALGAPB Ral GTPase activating protein, beta subunit (non-catalytic) 0.0110965
NCKAP1 NCK-associated protein 1 0.0110811
RLF rearranged L-myc fusion 0.0110432
KDM3B lysine (K)-specific demethylase 3B 0.011004
KCTD3 potassium channel tetramerization domain containing 3 0.0108795
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0108458
HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 0.0108279
DENND4C DENN/MADD domain containing 4C 0.0108002
RYK receptor-like tyrosine kinase 0.0107907
TMEM39A transmembrane protein 39A 0.0107368
RBM33 RNA binding motif protein 33 0.0106642
CCNC cyclin C 0.0105891
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1 0.0105754
PNISR PNN-interacting serine/arginine-rich protein 0.0105566
NPTN neuroplastin 0.0105073
ANKRD28 ankyrin repeat domain 28 0.0104601
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0104466
AUH AU RNA binding protein/enoyl-CoA hydratase 0.0104259
ARHGAP11A Rho GTPase activating protein 11A 0.010347
NAP1L4 nucleosome assembly protein 1-like 4 0.0103371
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 0.0102938
EPS8 epidermal growth factor receptor pathway substrate 8 0.0102859
NEK7 NIMA-related kinase 7 0.0102598
USP24 ubiquitin specific peptidase 24 0.0100953
CKAP2 cytoskeleton associated protein 2 0.00999582
DIDO1 death inducer-obliterator 1 0.00998349
GADD45B growth arrest and DNA-damage-inducible, beta 0.00997357
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.00993523
RAB18 RAB18, member RAS oncogene family 0.00989806

decreased expression

Symbol Name Standardized Value
NCEH1 neutral cholesterol ester hydrolase 1 -0.11007
TMSB10 thymosin beta 10 -0.107641
PTMA prothymosin, alpha -0.105038
BCL2L1 BCL2-like 1 -0.102758
UBC ubiquitin C -0.0988153
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0934
MAML2 mastermind-like 2 (Drosophila) -0.0898361
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0895376
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.0816595
FTL ferritin, light polypeptide -0.0782594
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0778111
AHNAK AHNAK nucleoprotein -0.0764149
VCL vinculin -0.0742763
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0684586
KRT18 keratin 18, type I -0.0674029
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0658544
LDHA lactate dehydrogenase A -0.0643442
ANXA2 annexin A2 -0.0636657
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0620234
ACTN4 actinin, alpha 4 -0.0615097
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0600922
TPT1 tumor protein, translationally-controlled 1 -0.0574528
CEMIP cell migration inducing protein, hyaluronan binding -0.0556313
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0556293
KRT8 keratin 8, type II -0.0545739
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0537167
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0536486
EPCAM epithelial cell adhesion molecule -0.0529585
RPL23 ribosomal protein L23 -0.0528884
RPL35A ribosomal protein L35a -0.0502062
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0500493
LOC112694756 uncharaterized LOC112694756 -0.0496797
NEBL nebulette -0.0493181
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0491985
ZNFX1 zinc finger, NFX1-type containing 1 -0.0490505
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0487911
EHBP1 EH domain binding protein 1 -0.0483292
FAT1 FAT atypical cadherin 1 -0.0476763
MX2 MX dynamin-like GTPase 2 -0.0470927
ZBTB20 zinc finger and BTB domain containing 20 -0.0462777
CCND1 cyclin D1 -0.0457774
H1-0 H1.0 linker histone -0.0432722
ETV6 ets variant 6 -0.0432427
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0429331
PATJ PATJ crumbs cell polarity complex component -0.0428748
PTPRK protein tyrosine phosphatase, receptor type, K -0.0428721
RALY RALY heterogeneous nuclear ribonucleoprotein -0.0427827
MYO1E myosin IE -0.04271
GNAS GNAS complex locus -0.042246
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0422418
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0421867
RPS27A ribosomal protein S27a -0.0420782
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0420268
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0417908
PKM pyruvate kinase, muscle -0.040918
PMEPA1 prostate transmembrane protein, androgen induced 1 -0.0400477
IFI6 interferon, alpha-inducible protein 6 -0.0397467
PERP PERP, TP53 apoptosis effector -0.0397144
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0395298
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0394931
MACC1 metastasis associated in colon cancer 1 -0.0389957
SP100 SP100 nuclear antigen -0.0385809
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0385513
RIGI RNA sensor RIG-I -0.0383568
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0380773
PLSCR1 phospholipid scramblase 1 -0.0380422
ZBTB38 zinc finger and BTB domain containing 38 -0.0380343
S100A6 S100 calcium binding protein A6 -0.037948
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0373769
GMDS GDP-mannose 4,6-dehydratase -0.0373292
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0372915
RNF213 ring finger protein 213 -0.0368885
SVIL supervillin -0.0365054
EGR1 early growth response 1 -0.0362452
YAP1 Yes-associated protein 1 -0.0355022
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0353482
FNDC3B fibronectin type III domain containing 3B -0.0346366
CANX calnexin -0.0343838
TOP1 topoisomerase (DNA) I -0.0340405
NKD1 naked cuticle homolog 1 (Drosophila) -0.0331291
CADPS Ca++-dependent secretion activator -0.03248
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) -0.0323665
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0323305
NFIA nuclear factor I/A -0.0322639
PKP4 plakophilin 4 -0.0321893
CUX1 cut-like homeobox 1 -0.0318515
MYOF myoferlin -0.0313589
LPP LIM domain containing preferred translocation partner in lipoma -0.0312471
IER3 immediate early response 3 -0.0312027
HLA-A major histocompatibility complex, class I, A -0.0310977
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0309978
ACTG1 actin gamma 1 -0.03093
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0308631
TXNIP thioredoxin interacting protein -0.0307417
ZMYND8 zinc finger, MYND-type containing 8 -0.030634
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8 -0.030143
RPS24 ribosomal protein S24 -0.0301116
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0300555
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0300486
ZFP36L2 ZFP36 ring finger protein-like 2 -0.0300458