Pentamidine (isethionate)_SW48 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pentamidine (isethionate) perturbation in SW48 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pentamidine (isethionate)_SW48 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AREG amphiregulin 0.133409
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0796423
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.07542
HILPDA hypoxia inducible lipid droplet-associated 0.0707358
PTMA prothymosin, alpha 0.0695081
LAMC2 laminin, gamma 2 0.062016
ANXA1 annexin A1 0.0573775
BIRC3 baculoviral IAP repeat containing 3 0.0571341
ANLN anillin, actin binding protein 0.0557702
CPOX coproporphyrinogen oxidase 0.0538345
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0516387
RPS2 ribosomal protein S2 0.0515685
ITPRID2 ITPR interacting domain containing 2 0.0512724
RPL14 ribosomal protein L14 0.0460271
EZR ezrin 0.0443219
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0436118
GOLGA4 golgin A4 0.0411658
KTN1 kinectin 1 (kinesin receptor) 0.0384299
DDIT4 DNA-damage-inducible transcript 4 0.0383032
RPS17 ribosomal protein S17 0.0382407
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0373611
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0372517
RPL37A ribosomal protein L37a 0.0371859
PCBP2 poly(rC) binding protein 2 0.0357509
CCSER1 coiled-coil serine-rich protein 1 0.0349214
DIAPH1 diaphanous-related formin 1 0.0334583
TXNIP thioredoxin interacting protein 0.0325348
EIF4A2 eukaryotic translation initiation factor 4A2 0.0307139
SET SET nuclear proto-oncogene 0.0294295
PSAT1 phosphoserine aminotransferase 1 0.0293811
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0289865
HDGF hepatoma-derived growth factor 0.0286363
FAT1 FAT atypical cadherin 1 0.0284137
PNN pinin, desmosome associated protein 0.0284131
TSC22D2 TSC22 domain family, member 2 0.0282523
VEGFA vascular endothelial growth factor A 0.0276416
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0275643
DUSP4 dual specificity phosphatase 4 0.0270849
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) 0.0267626
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0263643
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.026232
KITLG KIT ligand 0.0261208
TM9SF3 transmembrane 9 superfamily member 3 0.0261193
RPS5 ribosomal protein S5 0.0260355
TFG TRK-fused gene 0.0260008
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0258343
ERRFI1 ERBB receptor feedback inhibitor 1 0.0258164
FLOT1 flotillin 1 0.0257087
ASNS asparagine synthetase (glutamine-hydrolyzing) 0.0256435
RPL27 ribosomal protein L27 0.0255408
DSPP dentin sialophosphoprotein 0.0252049
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0249775
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0249509
RPS12 ribosomal protein S12 0.0244858
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0243969
EEF1G eukaryotic translation elongation factor 1 gamma 0.0243122
RPL21 ribosomal protein L21 0.0242031
PLAUR plasminogen activator, urokinase receptor 0.0241693
AKAP9 A kinase (PRKA) anchor protein 9 0.0239724
GRB10 growth factor receptor-bound protein 10 0.0237177
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0236978
RPS18 ribosomal protein S18 0.0236449
EPHA2 EPH receptor A2 0.0234902
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0234421
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0233447
DENND5B DENN/MADD domain containing 5B 0.0232908
UFM1 ubiquitin-fold modifier 1 0.0229391
H1-10 H1.10 linker histone 0.0228414
GARS1 glycyl-tRNA synthetase 1 0.0227486
ZNF292 zinc finger protein 292 0.0226369
MACF1 microtubule-actin crosslinking factor 1 0.0226093
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.02255
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0224076
FOSL1 FOS-like antigen 1 0.0220338
YBX1 Y box binding protein 1 0.0219269
FAM107B family with sequence similarity 107, member B 0.0217291
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0214806
SRRM1 serine/arginine repetitive matrix 1 0.0212624
RAD23B RAD23 homolog B (S. cerevisiae) 0.0210921
MCL1 myeloid cell leukemia 1 0.0210106
EIF4B eukaryotic translation initiation factor 4B 0.0209064
RYBP RING1 and YY1 binding protein 0.0208043
FMNL2 formin-like 2 0.0205807
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0205195
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0204009
HIP1 huntingtin interacting protein 1 0.0199548
CEP152 centrosomal protein 152kDa 0.0197816
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0196946
RPL5 ribosomal protein L5 0.0195751
RALA v-ral simian leukemia viral oncogene homolog A (ras related) 0.019504
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.0194317
ARRDC3 arrestin domain containing 3 0.0192741
SLC38A2 solute carrier family 38, member 2 0.0192192
HSPA8 heat shock 70kDa protein 8 0.0192156
SRPK2 SRSF protein kinase 2 0.019188
CEMIP2 cell migration inducing hyaluronidase 2 0.0191697
CCNY cyclin Y 0.0191671
RPL9 ribosomal protein L9 0.0191297
B2M beta-2-microglobulin 0.0190796
SOCS6 suppressor of cytokine signaling 6 0.0187505

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.164353
TPT1 tumor protein, translationally-controlled 1 -0.113666
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.106654
HMGA2 high mobility group AT-hook 2 -0.0959895
LAMB3 laminin, beta 3 -0.0729733
EMP1 epithelial membrane protein 1 -0.0647413
IER3 immediate early response 3 -0.0616011
RPS4X ribosomal protein S4, X-linked -0.0611964
RPL35A ribosomal protein L35a -0.0590723
HDAC2 histone deacetylase 2 -0.0588874
LMO7 LIM domain 7 -0.0586473
AHNAK AHNAK nucleoprotein -0.0540554
RAB10 RAB10, member RAS oncogene family -0.0534105
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.051995
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0478789
ARF1 ADP-ribosylation factor 1 -0.0459318
RCOR1 REST corepressor 1 -0.0456442
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0449411
RPS24 ribosomal protein S24 -0.0446659
MTUS1 microtubule associated tumor suppressor 1 -0.0436418
CDK13 cyclin-dependent kinase 13 -0.0436028
ANXA2 annexin A2 -0.0432611
RPLP1 ribosomal protein, large, P1 -0.0431599
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0423937
CUX1 cut-like homeobox 1 -0.0417658
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0397172
RPLP0 ribosomal protein, large, P0 -0.0395574
ESYT2 extended synaptotagmin-like protein 2 -0.0388719
DIAPH2 diaphanous-related formin 2 -0.0388197
RSL1D1 ribosomal L1 domain containing 1 -0.0380648
UBE3C ubiquitin protein ligase E3C -0.0378831
PDLIM5 PDZ and LIM domain 5 -0.03724
DOCK5 dedicator of cytokinesis 5 -0.0367002
TMSB10 thymosin beta 10 -0.0366348
CD36 CD36 molecule (thrombospondin receptor) -0.0360143
AOPEP aminopeptidase O (putative) -0.0359077
TXNRD1 thioredoxin reductase 1 -0.0351315
ACTG1 actin gamma 1 -0.0339469
PDXK pyridoxal (pyridoxine, vitamin B6) kinase -0.033171
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0321114
NAP1L1 nucleosome assembly protein 1-like 1 -0.0318716
CD44 CD44 molecule (Indian blood group) -0.0318408
NFXL1 nuclear transcription factor, X-box binding-like 1 -0.0311463
TAS2R14 taste receptor, type 2, member 14 -0.0309884
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0307499
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0305911
EHBP1 EH domain binding protein 1 -0.0300933
ACTN4 actinin, alpha 4 -0.0300296
PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme -0.0297983
MED13 mediator complex subunit 13 -0.0297921
TBC1D5 TBC1 domain family, member 5 -0.0294703
SERTAD2 SERTA domain containing 2 -0.0293748
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0291154
EIF3E eukaryotic translation initiation factor 3, subunit E -0.0289962
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0289513
TNRC6B trinucleotide repeat containing 6B -0.028198
RAD51B RAD51 paralog B -0.0281721
UBE2H ubiquitin-conjugating enzyme E2H -0.0280964
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0280086
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0279355
RASA2 RAS p21 protein activator 2 -0.0278857
S100A6 S100 calcium binding protein A6 -0.0277432
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0271208
CDC42BPB CDC42 binding protein kinase beta (DMPK-like) -0.0270633
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0269787
NIPBL Nipped-B homolog (Drosophila) -0.0267859
KLF5 Kruppel-like factor 5 (intestinal) -0.0267021
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0266782
EXOC4 exocyst complex component 4 -0.0264152
RPS27A ribosomal protein S27a -0.026301
LOC112694756 uncharaterized LOC112694756 -0.0262756
UBE2K ubiquitin-conjugating enzyme E2K -0.0260444
OGA O-GlcNAcase -0.0260293
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0259462
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.025734
CCAR1 cell division cycle and apoptosis regulator 1 -0.0256675
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0253905
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0253233
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0250621
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0250279
PRPF8 pre-mRNA processing factor 8 -0.0248346
PCCB propionyl CoA carboxylase, beta polypeptide -0.0247995
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 -0.0246603
LRP8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor -0.0246509
RPL7 ribosomal protein L7 -0.0245704
ZFAND3 zinc finger, AN1-type domain 3 -0.0244362
EEF2 eukaryotic translation elongation factor 2 -0.0243055
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0242781
XPO1 exportin 1 -0.0241449
NPR2 natriuretic peptide receptor 2 -0.0240397
CDHR3 cadherin-related family member 3 -0.023993
LAMA4 laminin, alpha 4 -0.0239791
CSNK1E casein kinase 1, epsilon -0.0239405
RPS25 ribosomal protein S25 -0.0238852
RPS28 ribosomal protein S28 -0.0236785
TUBB4B tubulin, beta 4B class IVb -0.0236537
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.0234165
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0233851
RPL11 ribosomal protein L11 -0.0230337
TAOK1 TAO kinase 1 -0.0229478