| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Peretinoin perturbation in SNU-423 cell line (Tahoe Therapeutics) |
| Similar Terms | |
| Downloads & Tools |
200 genes differentially expressed following the Peretinoin_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| MYH9 | myosin, heavy chain 9, non-muscle | 0.265187 |
| AKAP12 | A kinase (PRKA) anchor protein 12 | 0.217951 |
| TRIO | trio Rho guanine nucleotide exchange factor | 0.214318 |
| NAV2 | neuron navigator 2 | 0.162498 |
| DST | dystonin | 0.154935 |
| SOD2 | superoxide dismutase 2, mitochondrial | 0.136347 |
| MSN | moesin | 0.115345 |
| ELL2 | elongation factor, RNA polymerase II, 2 | 0.0999714 |
| IGFN1 | immunoglobulin-like and fibronectin type III domain containing 1 | 0.0840504 |
| ABL2 | ABL proto-oncogene 2, non-receptor tyrosine kinase | 0.0802006 |
| FNDC3B | fibronectin type III domain containing 3B | 0.0792829 |
| RTN4 | reticulon 4 | 0.0685024 |
| NDRG1 | N-myc downstream regulated 1 | 0.0682017 |
| IL1RAPL1 | interleukin 1 receptor accessory protein-like 1 | 0.0657206 |
| HDAC9 | histone deacetylase 9 | 0.065515 |
| APLP2 | amyloid beta (A4) precursor-like protein 2 | 0.0608251 |
| SPTBN1 | spectrin, beta, non-erythrocytic 1 | 0.0560311 |
| CREB5 | cAMP responsive element binding protein 5 | 0.0558551 |
| RBMS3 | RNA binding motif, single stranded interacting protein 3 | 0.0549002 |
| FRMD4A | FERM domain containing 4A | 0.0545479 |
| TANC2 | tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 | 0.0542546 |
| NAMPT | nicotinamide phosphoribosyltransferase | 0.0540959 |
| FMNL2 | formin-like 2 | 0.053994 |
| ANKRD1 | ankyrin repeat domain 1 (cardiac muscle) | 0.0537791 |
| JMJD1C | jumonji domain containing 1C | 0.0524658 |
| SFTPA2 | surfactant protein A2 | 0.0513742 |
| FLNB | filamin B, beta | 0.0505179 |
| ATXN1 | ataxin 1 | 0.0477317 |
| SDK1 | sidekick cell adhesion molecule 1 | 0.0467603 |
| LRRFIP1 | leucine rich repeat (in FLII) interacting protein 1 | 0.0466869 |
| LPP | LIM domain containing preferred translocation partner in lipoma | 0.0465043 |
| UBE2E2 | ubiquitin-conjugating enzyme E2E 2 | 0.0443586 |
| PALM2AKAP2 | PALM2 and AKAP2 fusion | 0.042182 |
| ABCA1 | ATP-binding cassette, sub-family A (ABC1), member 1 | 0.041708 |
| DCBLD2 | discoidin, CUB and LCCL domain containing 2 | 0.0416785 |
| ETS1 | v-ets avian erythroblastosis virus E26 oncogene homolog 1 | 0.0410791 |
| RB1CC1 | RB1-inducible coiled-coil 1 | 0.0403674 |
| MACF1 | microtubule-actin crosslinking factor 1 | 0.0402407 |
| KCNMA1 | potassium channel, calcium activated large conductance subfamily M alpha, member 1 | 0.0402329 |
| PHLDB2 | pleckstrin homology-like domain, family B, member 2 | 0.0398698 |
| SAMD4A | sterile alpha motif domain containing 4A | 0.0388912 |
| SLC35F3 | solute carrier family 35, member F3 | 0.0384559 |
| IGF2BP2 | insulin-like growth factor 2 mRNA binding protein 2 | 0.037564 |
| RUNX1 | runt-related transcription factor 1 | 0.0374308 |
| EGR1 | early growth response 1 | 0.0367669 |
| IMMP2L | IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) | 0.0362117 |
| ADAM12 | ADAM metallopeptidase domain 12 | 0.0352124 |
| FRMD5 | FERM domain containing 5 | 0.0345079 |
| CEP250 | centrosomal protein 250kDa | 0.034111 |
| ASAP1 | ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 | 0.0336699 |
| FOXO3 | forkhead box O3 | 0.0335649 |
| STC1 | stanniocalcin 1 | 0.0335294 |
| NONO | non-POU domain containing, octamer-binding | 0.033427 |
| FRMD6 | FERM domain containing 6 | 0.0331099 |
| IGF2R | insulin-like growth factor 2 receptor | 0.0330426 |
| PPARD | peroxisome proliferator-activated receptor delta | 0.0317564 |
| ARF4 | ADP-ribosylation factor 4 | 0.0312393 |
| CORO1C | coronin, actin binding protein, 1C | 0.0309568 |
| DYNC1H1 | dynein, cytoplasmic 1, heavy chain 1 | 0.0307637 |
| FAM219A | family with sequence similarity 219, member A | 0.0306423 |
| MT2A | metallothionein 2A | 0.0305859 |
| DTNA | dystrobrevin, alpha | 0.030206 |
| NFKBIZ | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta | 0.0291284 |
| MCL1 | myeloid cell leukemia 1 | 0.0290116 |
| UAP1 | UDP-N-acetylglucosamine pyrophosphorylase 1 | 0.0287156 |
| AGAP1 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 | 0.0283349 |
| CDCP1 | CUB domain containing protein 1 | 0.0282457 |
| EEF1A1 | eukaryotic translation elongation factor 1 alpha 1 | 0.0281341 |
| HIVEP2 | human immunodeficiency virus type I enhancer binding protein 2 | 0.0281219 |
| PPFIBP1 | PTPRF interacting protein, binding protein 1 (liprin beta 1) | 0.0280886 |
| ABTB3 | ankyrin repeat and BTB domain containing 3 | 0.028088 |
| DIAPH2 | diaphanous-related formin 2 | 0.0280264 |
| VEGFA | vascular endothelial growth factor A | 0.0277053 |
| TNIP1 | TNFAIP3 interacting protein 1 | 0.0273679 |
| ITGB1 | integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) | 0.0272129 |
| COL6A3 | collagen, type VI, alpha 3 | 0.0271694 |
| AFF3 | AF4/FMR2 family, member 3 | 0.0271123 |
| EGFR | epidermal growth factor receptor | 0.0269822 |
| PPP1R15A | protein phosphatase 1, regulatory subunit 15A | 0.0269691 |
| SMYD3 | SET and MYND domain containing 3 | 0.026708 |
| GRIN2A | glutamate receptor, ionotropic, N-methyl D-aspartate 2A | 0.0266799 |
| SPAG9 | sperm associated antigen 9 | 0.0265101 |
| MAP1B | microtubule-associated protein 1B | 0.0264849 |
| BTBD9 | BTB (POZ) domain containing 9 | 0.0263812 |
| IL6ST | interleukin 6 signal transducer | 0.0262859 |
| SUPT3H | suppressor of Ty 3 homolog (S. cerevisiae) | 0.026089 |
| USP9X | ubiquitin specific peptidase 9, X-linked | 0.0259846 |
| RPL35 | ribosomal protein L35 | 0.025699 |
| ACTN1 | actinin, alpha 1 | 0.0255976 |
| EPB41L2 | erythrocyte membrane protein band 4.1-like 2 | 0.0255081 |
| KPNA4 | karyopherin alpha 4 (importin alpha 3) | 0.0254729 |
| SRRM2 | serine/arginine repetitive matrix 2 | 0.0254031 |
| CLIC4 | chloride intracellular channel 4 | 0.0253203 |
| STARD13 | StAR-related lipid transfer (START) domain containing 13 | 0.0252395 |
| MYO10 | myosin X | 0.0251321 |
| ZFAND3 | zinc finger, AN1-type domain 3 | 0.0250024 |
| FHIP1A | FHF complex subunit HOOK interacting protein 1A | 0.0249254 |
| APP | amyloid beta (A4) precursor protein | 0.0248039 |
| KIRREL1 | kirre like nephrin family adhesion molecule 1 | 0.02422 |
| AK1 | adenylate kinase 1 | 0.0241493 |
| Symbol | Name | Standardized Value |
|---|---|---|
| VIM | vimentin | -0.157628 |
| IGFBP3 | insulin-like growth factor binding protein 3 | -0.0883236 |
| TPT1 | tumor protein, translationally-controlled 1 | -0.0722932 |
| HSPA5 | heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) | -0.0702199 |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.0613303 |
| FTL | ferritin, light polypeptide | -0.0601405 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | -0.0600851 |
| PTMA | prothymosin, alpha | -0.0586005 |
| MARCKS | myristoylated alanine-rich protein kinase C substrate | -0.0541518 |
| RPS24 | ribosomal protein S24 | -0.0492851 |
| BICC1 | BicC family RNA binding protein 1 | -0.0469649 |
| ERO1A | endoplasmic reticulum oxidoreductase 1 alpha | -0.0439162 |
| IER3 | immediate early response 3 | -0.0438404 |
| RPL35A | ribosomal protein L35a | -0.0437418 |
| RPLP1 | ribosomal protein, large, P1 | -0.0424544 |
| UGCG | UDP-glucose ceramide glucosyltransferase | -0.0391901 |
| NAP1L1 | nucleosome assembly protein 1-like 1 | -0.038289 |
| ACTG1 | actin gamma 1 | -0.0367382 |
| VCAN | versican | -0.0367172 |
| POTEF | POTE ankyrin domain family, member F | -0.0355066 |
| TPM4 | tropomyosin 4 | -0.0353877 |
| HLA-B | major histocompatibility complex, class I, B | -0.0341077 |
| CANX | calnexin | -0.0337239 |
| FTH1 | ferritin, heavy polypeptide 1 | -0.0336587 |
| PNRC1 | proline-rich nuclear receptor coactivator 1 | -0.0332034 |
| RPL23 | ribosomal protein L23 | -0.0331346 |
| PGK1 | phosphoglycerate kinase 1 | -0.0320383 |
| BTG1 | B-cell translocation gene 1, anti-proliferative | -0.0314574 |
| GOLGA4 | golgin A4 | -0.0313427 |
| CTSD | cathepsin D | -0.03132 |
| LDHA | lactate dehydrogenase A | -0.0304825 |
| SCD | stearoyl-CoA desaturase (delta-9-desaturase) | -0.0300721 |
| P4HA2 | prolyl 4-hydroxylase, alpha polypeptide II | -0.0291987 |
| TGFBI | transforming growth factor, beta-induced, 68kDa | -0.0290488 |
| NUCKS1 | nuclear casein kinase and cyclin-dependent kinase substrate 1 | -0.0289758 |
| COL1A1 | collagen, type I, alpha 1 | -0.0284834 |
| DEK | DEK proto-oncogene | -0.0281981 |
| COL1A2 | collagen, type I, alpha 2 | -0.028036 |
| SPARC | secreted protein, acidic, cysteine-rich (osteonectin) | -0.0271811 |
| THBS1 | thrombospondin 1 | -0.0269707 |
| KPNB1 | karyopherin (importin) beta 1 | -0.0267804 |
| RPL26 | ribosomal protein L26 | -0.0266242 |
| HIF1A | hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) | -0.0265813 |
| TPM1 | tropomyosin 1 (alpha) | -0.0264472 |
| SFRP1 | secreted frizzled-related protein 1 | -0.0261686 |
| VDAC1 | voltage-dependent anion channel 1 | -0.0261314 |
| NPEPPS | aminopeptidase puromycin sensitive | -0.0245552 |
| BIRC3 | baculoviral IAP repeat containing 3 | -0.024487 |
| BHLHE40 | basic helix-loop-helix family, member e40 | -0.024467 |
| SEPTIN7 | septin 7 | -0.0241844 |
| PFKFB4 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 | -0.0241744 |
| SLC38A1 | solute carrier family 38, member 1 | -0.0236085 |
| SRGN | serglycin | -0.0229264 |
| WTAP | Wilms tumor 1 associated protein | -0.022868 |
| GNAS | GNAS complex locus | -0.0227098 |
| TAF1D | TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa | -0.0224402 |
| HLA-E | major histocompatibility complex, class I, E | -0.0223137 |
| P4HB | prolyl 4-hydroxylase, beta polypeptide | -0.0221039 |
| TMEM123 | transmembrane protein 123 | -0.021938 |
| TKT | transketolase | -0.0213454 |
| ANXA2 | annexin A2 | -0.0212658 |
| RPL39 | ribosomal protein L39 | -0.021217 |
| EDIL3 | EGF-like repeats and discoidin I-like domains 3 | -0.0211188 |
| EXT1 | exostosin glycosyltransferase 1 | -0.0203233 |
| KDM3A | lysine (K)-specific demethylase 3A | -0.0202438 |
| WSB1 | WD repeat and SOCS box containing 1 | -0.0202349 |
| P4HA1 | prolyl 4-hydroxylase, alpha polypeptide I | -0.020165 |
| MTDH | metadherin | -0.0201213 |
| AHI1 | Abelson helper integration site 1 | -0.019914 |
| SQSTM1 | sequestosome 1 | -0.0198866 |
| RPL27A | ribosomal protein L27a | -0.0198554 |
| MBNL2 | muscleblind-like splicing regulator 2 | -0.0198101 |
| TAX1BP1 | Tax1 (human T-cell leukemia virus type I) binding protein 1 | -0.0196039 |
| STT3B | STT3B, subunit of the oligosaccharyltransferase complex (catalytic) | -0.0195954 |
| RPL34 | ribosomal protein L34 | -0.0195593 |
| RPS6 | ribosomal protein S6 | -0.0195093 |
| IRF2BP2 | interferon regulatory factor 2 binding protein 2 | -0.0194898 |
| HSPD1 | heat shock 60kDa protein 1 (chaperonin) | -0.0193995 |
| LOC102724023 | ES1 protein homolog, mitochondrial | -0.0192914 |
| RPL38 | ribosomal protein L38 | -0.0191921 |
| FUS | FUS RNA binding protein | -0.0190912 |
| EIF1 | eukaryotic translation initiation factor 1 | -0.0189531 |
| CALR | calreticulin | -0.018946 |
| RPS25 | ribosomal protein S25 | -0.0187588 |
| PTP4A2 | protein tyrosine phosphatase type IVA, member 2 | -0.0187524 |
| GNB1 | guanine nucleotide binding protein (G protein), beta polypeptide 1 | -0.0187161 |
| TMEM178B | transmembrane protein 178B | -0.0185309 |
| LCORL | ligand dependent nuclear receptor corepressor-like | -0.0184848 |
| BBX | bobby sox homolog (Drosophila) | -0.0182514 |
| EIF2S3 | eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa | -0.018241 |
| RTN3 | reticulon 3 | -0.0180916 |
| GPHN | gephyrin | -0.0174174 |
| RPL37A | ribosomal protein L37a | -0.0174092 |
| HLA-A | major histocompatibility complex, class I, A | -0.0171381 |
| ARID4B | AT rich interactive domain 4B (RBP1-like) | -0.0169096 |
| ALCAM | activated leukocyte cell adhesion molecule | -0.0168662 |
| ASH1L | ash1 (absent, small, or homeotic)-like (Drosophila) | -0.0168351 |
| TBC1D8 | TBC1 domain family, member 8 (with GRAM domain) | -0.0168005 |
| RBM3 | RNA binding motif (RNP1, RRM) protein 3 | -0.016758 |
| STAU1 | staufen double-stranded RNA binding protein 1 | -0.0166271 |
