Perturb_12217_KD_EPRS_SRP073504 Gene Set

Dataset PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations
Category transcriptomics
Type gene perturbation
Description KD perturbation targeting EPRS in MCF7 TamR cells cell line (Study accession: SRP073504) (PerturbAtlas)
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Genes

200 genes differentially expressed following the Perturb_12217_KD_EPRS_SRP073504 gene perturbation from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.

increased expression

Symbol Name Standardized Value
RFTN1 raftlin, lipid raft linker 1 20.0
CCDC154 coiled-coil domain containing 154 20.0
SAT1 spermidine/spermine N1-acetyltransferase 1 20.0
FAM65C family with sequence similarity 65, member C 20.0
FAM3B family with sequence similarity 3, member B 20.0
QPRT quinolinate phosphoribosyltransferase 20.0
ELF5 E74-like factor 5 (ets domain transcription factor) 20.0
BAMBI BMP and activin membrane-bound inhibitor 20.0
BRINP3 bone morphogenetic protein/retinoic acid inducible neural-specific 3 20.0
VIPR2 vasoactive intestinal peptide receptor 2 20.0
SELENBP1 selenium binding protein 1 20.0
LXN latexin 20.0
MYO1G myosin IG 20.0
CROT carnitine O-octanoyltransferase 20.0
CERS4 ceramide synthase 4 20.0
SCN1B sodium channel, voltage gated, type I beta subunit 20.0
ST6GAL1 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 20.0
ADCY5 adenylate cyclase 5 20.0
BDKRB2 bradykinin receptor B2 20.0
SLC4A4 solute carrier family 4 (sodium bicarbonate cotransporter), member 4 20.0
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 20.0
HPX hemopexin 20.0
TMEM150C transmembrane protein 150C 18.7959
ATP13A5 ATPase type 13A5 18.3188
LOC105371045 uncharacterized LOC105371045 18.2596
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group) 18.0605
RGS16 regulator of G-protein signaling 16 17.6819
HOPX HOP homeobox 17.6596
ATP6V0A4 ATPase, H+ transporting, lysosomal V0 subunit a4 17.4473
KMO kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) 17.4365
DHRS3 dehydrogenase/reductase (SDR family) member 3 17.3516
CPAMD8 C3 and PZP-like, alpha-2-macroglobulin domain containing 8 17.3261
DNAJC12 DnaJ (Hsp40) homolog, subfamily C, member 12 17.3179
SLC25A18 solute carrier family 25 (glutamate carrier), member 18 17.0424
ESPN espin 16.6092
CAPN13 calpain 13 16.164
TSPYL2 TSPY-like 2 15.2254
CRABP1 cellular retinoic acid binding protein 1 15.0525
RORC RAR-related orphan receptor C 13.8268
C2ORF54 chromosome 2 open reading frame 54 13.6198
FAM84A family with sequence similarity 84, member A 13.3466
PRRT4 proline-rich transmembrane protein 4 12.7526
CRABP2 cellular retinoic acid binding protein 2 12.7168
SMPD1 sphingomyelin phosphodiesterase 1, acid lysosomal 12.6501
ZBTB42 zinc finger and BTB domain containing 42 12.6209
GPER1 G protein-coupled estrogen receptor 1 12.5415
IRX3 iroquois homeobox 3 12.5067
STRADB STE20-related kinase adaptor beta 12.4731
FOXO4 forkhead box O4 12.4282
PLEKHH2 pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 12.4062
TGFB3 transforming growth factor, beta 3 12.2868
TRIM3 tripartite motif containing 3 12.2148
GJB2 gap junction protein, beta 2, 26kDa 11.9636
FBXO2 F-box protein 2 11.8781
CNGA1 cyclic nucleotide gated channel alpha 1 11.8031
PRSS8 protease, serine, 8 11.7692
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 11.7275
LRRC31 leucine rich repeat containing 31 11.6883
DDIT4 DNA-damage-inducible transcript 4 11.6574
RCAN1 regulator of calcineurin 1 11.6272
CCDC83 coiled-coil domain containing 83 11.6001
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 11.5666
CCDC159 coiled-coil domain containing 159 11.2881
WNT6 wingless-type MMTV integration site family, member 6 11.0639
CPE carboxypeptidase E 10.9688
LINC01207 long intergenic non-protein coding RNA 1207 10.9621
RASSF2 Ras association (RalGDS/AF-6) domain family member 2 10.8541
GPRC5C G protein-coupled receptor, class C, group 5, member C 10.8148
APOL2 apolipoprotein L, 2 10.7623
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 10.7042
MGAT4A mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A 10.6814
HACD1 3-hydroxyacyl-CoA dehydratase 1 10.6814
PNPLA7 patatin-like phospholipase domain containing 7 10.6622
CARD14 caspase recruitment domain family, member 14 10.6366
LCP1 lymphocyte cytosolic protein 1 (L-plastin) 10.488
SLC11A2 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 10.4536
MAGED2 melanoma antigen family D2 10.3472
GALNT12 polypeptide N-acetylgalactosaminyltransferase 12 10.3039
F7 coagulation factor VII (serum prothrombin conversion accelerator) 10.2727
SLC9A3R2 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 10.2336
SLC6A19 solute carrier family 6 (neutral amino acid transporter), member 19 10.1952
SNN stannin 10.1885
GRB14 growth factor receptor-bound protein 14 10.172
ARHGAP4 Rho GTPase activating protein 4 10.1444
GULP1 GULP, engulfment adaptor PTB domain containing 1 10.0945
QPCT glutaminyl-peptide cyclotransferase 10.052
C17ORF58 chromosome 17 open reading frame 58 10.0246
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1 9.93385
CHRM1 cholinergic receptor, muscarinic 1 9.93385
ATP8A1 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 9.88224
ABCC11 ATP-binding cassette, sub-family C (CFTR/MRP), member 11 9.87771
NECAB3 N-terminal EF-hand calcium binding protein 3 9.83612
PROM2 prominin 2 9.78811
IL6R interleukin 6 receptor 9.78306
OSTM1 osteopetrosis associated transmembrane protein 1 9.77235
ATOH8 atonal homolog 8 (Drosophila) 9.76895
GRAMD2 GRAM domain containing 2 9.7553
CREB3L4 cAMP responsive element binding protein 3-like 4 9.70963
FLT3 fms-related tyrosine kinase 3 9.70032
FUCA1 fucosidase, alpha-L- 1, tissue 9.60709

decreased expression

Symbol Name Standardized Value
DOK7 docking protein 7 -20.0
CXCL8 chemokine (C-X-C motif) ligand 8 -20.0
PRMT6 protein arginine methyltransferase 6 -20.0
SPINK4 serine peptidase inhibitor, Kazal type 4 -20.0
CREBL2 cAMP responsive element binding protein-like 2 -20.0
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme -20.0
IGFBP5 insulin-like growth factor binding protein 5 -20.0
NLN neurolysin (metallopeptidase M3 family) -20.0
ZNF492 zinc finger protein 492 -20.0
ZNF28 zinc finger protein 28 -20.0
CTPS1 CTP synthase 1 -20.0
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -20.0
SLITRK6 SLIT and NTRK-like family, member 6 -20.0
UNG uracil-DNA glycosylase -20.0
AREG amphiregulin -20.0
EPRS glutamyl-prolyl-tRNA synthetase -20.0
CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase -20.0
ZNF681 zinc finger protein 681 -20.0
LIF leukemia inhibitory factor -20.0
ZNF468 zinc finger protein 468 -20.0
GBX2 gastrulation brain homeobox 2 -20.0
TFF1 trefoil factor 1 -20.0
EZR ezrin -20.0
ZNF724P zinc finger protein 724, pseudogene -20.0
GEMIN5 gem (nuclear organelle) associated protein 5 -20.0
ALDH1B1 aldehyde dehydrogenase 1 family, member B1 -20.0
MYC v-myc avian myelocytomatosis viral oncogene homolog -20.0
SYT16 synaptotagmin XVI -20.0
DCDC2 doublecortin domain containing 2 -20.0
MEF2C myocyte enhancer factor 2C -20.0
FOXE1 forkhead box E1 -20.0
BTC betacellulin -20.0
TCOF1 Treacher Collins-Franceschetti syndrome 1 -19.699
TUBB6 tubulin, beta 6 class V -19.5229
TIPARP TCDD-inducible poly(ADP-ribose) polymerase -18.8539
POLR1B polymerase (RNA) I polypeptide B, 128kDa -18.8539
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -18.6778
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1 -18.1135
RAPGEFL1 Rap guanine nucleotide exchange factor (GEF)-like 1 -18.0969
MTPN myotrophin -17.8097
KNSTRN kinetochore-localized astrin/SPAG5 binding protein -17.7399
KCNF1 potassium channel, voltage gated modifier subfamily F, member 1 -17.7033
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -17.6676
FADS1 fatty acid desaturase 1 -17.6144
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -17.4895
ERLIN1 ER lipid raft associated 1 -17.3788
OSGIN1 oxidative stress induced growth inhibitor 1 -17.0292
LMNB2 lamin B2 -16.9423
GORASP2 golgi reassembly stacking protein 2, 55kDa -16.9423
AMZ1 archaelysin family metallopeptidase 1 -16.4814
MT2A metallothionein 2A -16.3456
SNRPA small nuclear ribonucleoprotein polypeptide A -16.164
URB2 URB2 ribosome biogenesis 2 homolog (S. cerevisiae) -16.0917
MXD1 MAX dimerization protein 1 -16.0917
PRSS23 protease, serine, 23 -15.8768
RAD51AP1 RAD51 associated protein 1 -15.8106
ZNF587B zinc finger protein 587B -15.7404
CCNB1IP1 cyclin B1 interacting protein 1, E3 ubiquitin protein ligase -15.7114
NOLC1 nucleolar and coiled-body phosphoprotein 1 -15.7032
DKC1 dyskeratosis congenita 1, dyskerin -15.6709
MRPL50 mitochondrial ribosomal protein L50 -15.5324
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -15.4162
TNFSF15 tumor necrosis factor (ligand) superfamily, member 15 -15.3053
HMMR hyaluronan-mediated motility receptor (RHAMM) -15.2863
HIST3H2BB histone cluster 3, H2bb -15.2196
HNRNPAB heterogeneous nuclear ribonucleoprotein A/B -15.0589
ZNF730 zinc finger protein 730 -15.0522
UCK2 uridine-cytidine kinase 2 -14.9988
RBPJ recombination signal binding protein for immunoglobulin kappa J region -14.8484
AMD1 adenosylmethionine decarboxylase 1 -14.7341
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 -14.7245
DDX21 DEAD (Asp-Glu-Ala-Asp) box helicase 21 -14.6214
SNRPA1 small nuclear ribonucleoprotein polypeptide A' -14.6115
METTL8 methyltransferase like 8 -14.5794
TFAP4 transcription factor AP-4 (activating enhancer binding protein 4) -14.556
STC2 stanniocalcin 2 -14.556
SYPL1 synaptophysin-like 1 -14.466
ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 -14.4508
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 -14.4496
CDK2 cyclin-dependent kinase 2 -14.4433
C14ORF132 chromosome 14 open reading frame 132 -14.0166
ZNF100 zinc finger protein 100 -13.8808
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 -13.8497
DOCK4 dedicator of cytokinesis 4 -13.6113
MPZL2 myelin protein zero-like 2 -13.503
CDCA7L cell division cycle associated 7-like -13.3131
LMO7 LIM domain 7 -13.2846
ACTL6A actin-like 6A -13.1221
HIST2H2BF histone cluster 2, H2bf -13.0892
BYSL bystin-like -13.0891
CCNA2 cyclin A2 -13.0321
RPL22L1 ribosomal protein L22-like 1 -12.9136
DARS2 aspartyl-tRNA synthetase 2, mitochondrial -12.8505
CMSS1 cms1 ribosomal small subunit homolog (yeast) -12.8326
F13A1 coagulation factor XIII, A1 polypeptide -12.7844
ZNF850 zinc finger protein 850 -12.7824
SLC47A1 solute carrier family 47 (multidrug and toxin extrusion), member 1 -12.7137
UTP15 UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae) -12.6294
TEX2 testis expressed 2 -12.6181
FADS3 fatty acid desaturase 3 -12.5415