Perturb_14324_KD_EIF5A2_SRP294329 Gene Set

Dataset PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations
Category transcriptomics
Type gene perturbation
Description KD perturbation targeting EIF5A2 in ovarian cancer cell line SKOV3 cell line (Study accession: SRP294329) (PerturbAtlas)
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Genes

200 genes differentially expressed following the Perturb_14324_KD_EIF5A2_SRP294329 gene perturbation from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.

increased expression

Symbol Name Standardized Value
SNX22 sorting nexin 22 20.0
NAV2 neuron navigator 2 20.0
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 20.0
SPC24 SPC24, NDC80 kinetochore complex component 20.0
SDR39U1 short chain dehydrogenase/reductase family 39U, member 1 20.0
ZACN zinc activated ligand-gated ion channel 20.0
MCF2L2 MCF.2 cell line derived transforming sequence-like 2 20.0
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) 20.0
CDC14B cell division cycle 14B 20.0
DOPEY1 dopey family member 1 20.0
TCP1 t-complex 1 17.2782
KCP kielin/chordin-like protein 17.1643
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent) 14.6839
C12ORF73 chromosome 12 open reading frame 73 14.5988
FBXL3 F-box and leucine-rich repeat protein 3 13.9896
GBA2 glucosidase, beta (bile acid) 2 13.8779
GPR132 G protein-coupled receptor 132 13.6444
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 13.2375
FAS Fas cell surface death receptor 13.0772
PHPT1 phosphohistidine phosphatase 1 12.8923
MARS methionyl-tRNA synthetase 12.3981
DPF3 D4, zinc and double PHD fingers, family 3 11.9517
PPP1R13B protein phosphatase 1, regulatory subunit 13B 11.9183
CENPP centromere protein P 11.9053
EME1 essential meiotic structure-specific endonuclease 1 11.8526
TMEM50B transmembrane protein 50B 11.8091
VEPH1 ventricular zone expressed PH domain-containing 1 11.3791
MMACHC methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria 11.1834
TMEM97 transmembrane protein 97 11.0514
FBXL6 F-box and leucine-rich repeat protein 6 10.978
RHOBTB2 Rho-related BTB domain containing 2 10.8719
PCNXL4 pecanex-like 4 (Drosophila) 10.858
RNF34 ring finger protein 34, E3 ubiquitin protein ligase 10.3797
SEC61A2 Sec61 alpha 2 subunit (S. cerevisiae) 10.0066
POLR3H polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) 9.24457
ATP6V1C2 ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2 8.58317
ABI2 abl-interactor 2 8.42952
ARSG arylsulfatase G 8.3533
NRDE2 NRDE-2, necessary for RNA interference, domain containing 8.3406
SLC51A solute carrier family 51, alpha subunit 8.18181
TXNDC17 thioredoxin domain containing 17 7.96081
SLC25A26 solute carrier family 25 (S-adenosylmethionine carrier), member 26 7.62909
TUBB6 tubulin, beta 6 class V 7.54803
ANKUB1 ankyrin repeat and ubiquitin domain containing 1 7.50062
GNPTG N-acetylglucosamine-1-phosphate transferase, gamma subunit 7.49001
MPDU1 mannose-P-dolichol utilization defect 1 7.40955
SLC7A6OS solute carrier family 7, member 6 opposite strand 7.37673
COL4A3BP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 7.15723
BOP1 block of proliferation 1 6.97803
RWDD2A RWD domain containing 2A 6.87282
PRPF40B PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae) 6.86839
FKBP15 FK506 binding protein 15, 133kDa 6.83021
CARD9 caspase recruitment domain family, member 9 6.61763
TYW1 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) 6.60175
CNTD1 cyclin N-terminal domain containing 1 6.59984
C1ORF122 chromosome 1 open reading frame 122 6.2235
LYPD1 LY6/PLAUR domain containing 1 6.20212
C18ORF8 chromosome 18 open reading frame 8 6.15678
GLIPR1 GLI pathogenesis-related 1 6.14945
VPRBP Vpr (HIV-1) binding protein 6.0233
NOL7 nucleolar protein 7, 27kDa 5.9599
GPRC5D G protein-coupled receptor, class C, group 5, member D 5.94522
METTL20 methyltransferase like 20 5.88368
PLLP plasmolipin 5.87604
WDR55 WD repeat domain 55 5.8367
ADGRA2 adhesion G protein-coupled receptor A2 5.74526
HOOK2 hook microtubule-tethering protein 2 5.34086
RYR3 ryanodine receptor 3 5.33614
LHFPL5 lipoma HMGIC fusion partner-like 5 5.30582
SNAP47 synaptosomal-associated protein, 47kDa 5.10511
ACO2 aconitase 2, mitochondrial 4.90684
POLR2L polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa 4.89937
IMPDH2 IMP (inosine 5'-monophosphate) dehydrogenase 2 4.86228
ZRANB3 zinc finger, RAN-binding domain containing 3 4.81328
CPM carboxypeptidase M 4.81328
NUDT6 nudix (nucleoside diphosphate linked moiety X)-type motif 6 4.7636
SPTY2D1-AS1 SPTY2D1 antisense RNA 1 4.6411
TUBA1C tubulin, alpha 1c 4.64058
PSMC3IP PSMC3 interacting protein 4.58897
AP1G2 adaptor-related protein complex 1, gamma 2 subunit 4.51961
CSNK1D casein kinase 1, delta 4.48968
NKX6-2 NK6 homeobox 2 4.48361
C15ORF40 chromosome 15 open reading frame 40 4.40409
FAM227B family with sequence similarity 227, member B 4.40409
COG8 component of oligomeric golgi complex 8 4.30279
ARHGEF39 Rho guanine nucleotide exchange factor (GEF) 39 4.26725
ZNF235 zinc finger protein 235 4.26435
SPATA7 spermatogenesis associated 7 4.13728
MPC2 mitochondrial pyruvate carrier 2 4.11864
DCAF6 DDB1 and CUL4 associated factor 6 4.04914
CIITA class II, major histocompatibility complex, transactivator 4.01525
USP20 ubiquitin specific peptidase 20 3.94968
GPSM2 G-protein signaling modulator 2 3.82221
CCDC18 coiled-coil domain containing 18 3.81796
CCNE2 cyclin E2 3.80942
MEA1 male-enhanced antigen 1 3.7614
C12ORF76 chromosome 12 open reading frame 76 3.56516
MFSD6 major facilitator superfamily domain containing 6 3.49648
NELFCD negative elongation factor complex member C/D 3.46111
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 3.45087

decreased expression

Symbol Name Standardized Value
TSPAN31 tetraspanin 31 -20.0
SNX32 sorting nexin 32 -20.0
TRIM59 tripartite motif containing 59 -20.0
WDR33 WD repeat domain 33 -20.0
HIC1 hypermethylated in cancer 1 -20.0
AFG3L2 AFG3-like AAA ATPase 2 -20.0
PHC1 polyhomeotic homolog 1 (Drosophila) -20.0
RER1 retention in endoplasmic reticulum sorting receptor 1 -20.0
ITFG2 integrin alpha FG-GAP repeat containing 2 -20.0
ENOSF1 enolase superfamily member 1 -20.0
FZD4 frizzled class receptor 4 -20.0
DNASE1 deoxyribonuclease I -20.0
ADCY3 adenylate cyclase 3 -20.0
C11ORF68 chromosome 11 open reading frame 68 -20.0
EXOSC9 exosome component 9 -18.6576
FAM149B1 family with sequence similarity 149, member B1 -18.6021
EMG1 EMG1 N1-specific pseudouridine methyltransferase -18.2076
DNAH11 dynein, axonemal, heavy chain 11 -18.1549
KLC1 kinesin light chain 1 -17.5171
EEF2KMT eukaryotic elongation factor 2 lysine methyltransferase -17.2596
ATG9B autophagy related 9B -16.9255
LCORL ligand dependent nuclear receptor corepressor-like -16.7726
LRRC41 leucine rich repeat containing 41 -16.1694
MALSU1 mitochondrial assembly of ribosomal large subunit 1 -16.0065
STUB1 STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase -16.0062
RNASEH2C ribonuclease H2, subunit C -15.789
MAX MYC associated factor X -15.7329
PSMB7 proteasome (prosome, macropain) subunit, beta type, 7 -15.5476
C19ORF54 chromosome 19 open reading frame 54 -14.5513
GNGT2 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 -14.1742
TGFB1 transforming growth factor, beta 1 -13.7688
NT5DC4 5'-nucleotidase domain containing 4 -13.3953
KIAA0895 KIAA0895 -13.292
ARFRP1 ADP-ribosylation factor related protein 1 -12.9737
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -12.9334
FAM166A family with sequence similarity 166, member A -12.6401
BEST1 bestrophin 1 -12.3501
UTP23 UTP23, small subunit (SSU) processome component, homolog (yeast) -12.0705
POLG polymerase (DNA directed), gamma -11.9027
ERCC1 excision repair cross-complementation group 1 -11.4824
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease -10.9447
FANCD2OS FANCD2 opposite strand -10.3164
MLX MLX, MAX dimerization protein -10.2839
ABCB9 ATP-binding cassette, sub-family B (MDR/TAP), member 9 -10.2029
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle -10.2002
SRRM5 serine/arginine repetitive matrix 5 -10.0553
FMNL3 formin-like 3 -9.7897
TRAPPC4 trafficking protein particle complex 4 -9.7063
FAM35A family with sequence similarity 35, member A -9.69754
ORAOV1 oral cancer overexpressed 1 -9.51614
HCFC1R1 host cell factor C1 regulator 1 (XPO1 dependent) -9.17809
SH3D21 SH3 domain containing 21 -8.98987
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -8.77339
DHX8 DEAH (Asp-Glu-Ala-His) box polypeptide 8 -8.61941
KHNYN KH and NYN domain containing -8.60676
SNAPC3 small nuclear RNA activating complex, polypeptide 3, 50kDa -8.57714
SAMD14 sterile alpha motif domain containing 14 -8.42139
CCDC85B coiled-coil domain containing 85B -8.31497
ATXN2 ataxin 2 -8.15948
MMEL1 membrane metallo-endopeptidase-like 1 -8.15942
LRRC59 leucine rich repeat containing 59 -7.69254
RPL27A ribosomal protein L27a -7.60614
CXCR5 chemokine (C-X-C motif) receptor 5 -7.43235
NRL neural retina leucine zipper -7.40256
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -7.36522
PMCH pro-melanin-concentrating hormone -7.34919
DLD dihydrolipoamide dehydrogenase -7.09978
FAM134C family with sequence similarity 134, member C -7.02864
COG1 component of oligomeric golgi complex 1 -7.00584
CAPN12 calpain 12 -6.97535
PAQR4 progestin and adipoQ receptor family member IV -6.84208
C22ORF15 chromosome 22 open reading frame 15 -6.83423
NR2C2AP nuclear receptor 2C2-associated protein -6.74279
YIF1B Yip1 interacting factor homolog B (S. cerevisiae) -6.65495
BASP1 brain abundant, membrane attached signal protein 1 -6.60398
NCAPD2 non-SMC condensin I complex, subunit D2 -6.57756
CLCC1 chloride channel CLIC-like 1 -6.55555
ZNF276 zinc finger protein 276 -6.47335
PRR29 proline rich 29 -6.37299
WRAP53 WD repeat containing, antisense to TP53 -6.17868
ERN2 endoplasmic reticulum to nucleus signaling 2 -6.08973
BCAR3 breast cancer anti-estrogen resistance 3 -5.9176
C19ORF44 chromosome 19 open reading frame 44 -5.86778
STRADB STE20-related kinase adaptor beta -5.35715
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -5.30343
PCBP2 poly(rC) binding protein 2 -5.24171
FAM151A family with sequence similarity 151, member A -5.18474
CISD3 CDGSH iron sulfur domain 3 -5.15001
ADRM1 adhesion regulating molecule 1 -5.14841
INTS8 integrator complex subunit 8 -5.13978
PPP2R5D protein phosphatase 2, regulatory subunit B', delta -5.08859
MTBP MDM2 binding protein -5.08318
RPS29 ribosomal protein S29 -4.83957
APOM apolipoprotein M -4.62674
PLD4 phospholipase D family, member 4 -4.54289
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -4.51961
NEIL1 nei endonuclease VIII-like 1 (E. coli) -4.51616
KRT18 keratin 18, type I -4.48745
SLC25A34 solute carrier family 25, member 34 -4.33963
TVP23A trans-golgi network vesicle protein 23 homolog A (S. cerevisiae) -4.30279