| Dataset | PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations |
| Category | transcriptomics |
| Type | gene perturbation |
| Description | KO perturbation targeting SMARCA4 in rhabdomyosarcoma RH4 cell line cell line (Study accession: SRP293781) (PerturbAtlas) |
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59 genes differentially expressed following the Perturb_15872_KO_SMARCA4_SRP293781 gene perturbation from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| WRNIP1 | Werner helicase interacting protein 1 | 7.73263 |
| C10ORF10 | chromosome 10 open reading frame 10 | 6.64353 |
| HS3ST6 | heparan sulfate (glucosamine) 3-O-sulfotransferase 6 | 6.00362 |
| TTC28 | tetratricopeptide repeat domain 28 | 4.9596 |
| KAT6A | K(lysine) acetyltransferase 6A | 4.47517 |
| ZNF804A | zinc finger protein 804A | 3.64012 |
| HIPK4 | homeodomain interacting protein kinase 4 | 2.67004 |
| TCP11 | t-complex 11, testis-specific | 2.62583 |
| MFSD7 | major facilitator superfamily domain containing 7 | 2.50233 |
| ZFYVE16 | zinc finger, FYVE domain containing 16 | 2.28896 |
| COA4 | cytochrome c oxidase assembly factor 4 homolog (S. cerevisiae) | 2.28699 |
| ADAMTS5 | ADAM metallopeptidase with thrombospondin type 1 motif, 5 | 2.25042 |
| CAPN3 | calpain 3, (p94) | 2.23226 |
| ADGRG5 | adhesion G protein-coupled receptor G5 | 2.1586 |
| TRMT13 | tRNA methyltransferase 13 homolog (S. cerevisiae) | 2.11548 |
| SAPCD2 | suppressor APC domain containing 2 | 2.10746 |
| CCDC54 | coiled-coil domain containing 54 | 2.09038 |
| ACTC1 | actin, alpha, cardiac muscle 1 | 2.02024 |
| NDUFB9 | NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa | 2.00675 |
| LYRM2 | LYR motif containing 2 | 1.96542 |
| TMEM244 | transmembrane protein 244 | 1.89597 |
| PRR33 | proline rich 33 | 1.89569 |
| TPRG1 | tumor protein p63 regulated 1 | 1.81651 |
| ULK2 | unc-51 like autophagy activating kinase 2 | 1.76348 |
| BCAN | brevican | 1.68779 |
| FASTKD1 | FAST kinase domains 1 | 1.63894 |
| HHATL | hedgehog acyltransferase-like | 1.49357 |
| CCDC43 | coiled-coil domain containing 43 | 1.49357 |
| RAPGEF3 | Rap guanine nucleotide exchange factor (GEF) 3 | 1.4114 |
| KIAA1671 | KIAA1671 | 1.39064 |
| NOC2L | nucleolar complex associated 2 homolog (S. cerevisiae) | 1.36886 |
| KRTAP3-2 | keratin associated protein 3-2 | 1.32991 |
| Symbol | Name | Standardized Value |
|---|---|---|
| HDGFRP3 | hepatoma-derived growth factor, related protein 3 | -4.22253 |
| SLC19A1 | solute carrier family 19 (folate transporter), member 1 | -4.13944 |
| LMF1 | lipase maturation factor 1 | -3.7461 |
| C10ORF105 | chromosome 10 open reading frame 105 | -3.36043 |
| ZNF275 | zinc finger protein 275 | -2.57336 |
| PSMB7 | proteasome (prosome, macropain) subunit, beta type, 7 | -2.4851 |
| BOLA1 | bolA family member 1 | -2.4851 |
| SYT7 | synaptotagmin VII | -2.4851 |
| TMEM186 | transmembrane protein 186 | -2.29409 |
| ISLR | immunoglobulin superfamily containing leucine-rich repeat | -2.11548 |
| DCP2 | decapping mRNA 2 | -1.96542 |
| C1QTNF1 | C1q and tumor necrosis factor related protein 1 | -1.91812 |
| HINT2 | histidine triad nucleotide binding protein 2 | -1.89569 |
| ADAMTS15 | ADAM metallopeptidase with thrombospondin type 1 motif, 15 | -1.88479 |
| NCOA3 | nuclear receptor coactivator 3 | -1.86263 |
| GRIK3 | glutamate receptor, ionotropic, kainate 3 | -1.76348 |
| DLD | dihydrolipoamide dehydrogenase | -1.66965 |
| SPTB | spectrin, beta, erythrocytic | -1.64999 |
| VIPR2 | vasoactive intestinal peptide receptor 2 | -1.64999 |
| EPHA1 | EPH receptor A1 | -1.54697 |
| KRT40 | keratin 40, type I | -1.47732 |
| MYBPHL | myosin binding protein H-like | -1.35441 |
| RAP1GAP2 | RAP1 GTPase activating protein 2 | -1.35193 |
| PHGDH | phosphoglycerate dehydrogenase | -1.34607 |
| FAM81A | family with sequence similarity 81, member A | -1.32991 |
| PPIE | peptidylprolyl isomerase E (cyclophilin E) | -1.32991 |
| CCDC154 | coiled-coil domain containing 154 | -1.32215 |
