Perturb_17690_KD_MDMX_SRP393452 Gene Set

Dataset PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations
Category transcriptomics
Type gene perturbation
Description KD perturbation targeting MDMX in uveal melanoma MEL202 cell line (Study accession: SRP393452) (PerturbAtlas)
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Genes

200 genes differentially expressed following the Perturb_17690_KD_MDMX_SRP393452 gene perturbation from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.

increased expression

Symbol Name Standardized Value
UBE2N ubiquitin-conjugating enzyme E2N 20.0
DLEU7 deleted in lymphocytic leukemia, 7 20.0
DOK6 docking protein 6 20.0
PIGC phosphatidylinositol glycan anchor biosynthesis, class C 16.7317
TTN titin 14.8512
AP1G2 adaptor-related protein complex 1, gamma 2 subunit 12.0824
PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 10.8686
TUBA1C tubulin, alpha 1c 10.2218
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 7.84467
TRMT13 tRNA methyltransferase 13 homolog (S. cerevisiae) 7.40682
C7ORF62 chromosome 7 open reading frame 62 7.08888
TRPA1 transient receptor potential cation channel, subfamily A, member 1 6.23601
HIST1H4I histone cluster 1, H4i 6.11982
C12ORF60 chromosome 12 open reading frame 60 5.98495
SESN3 sestrin 3 5.89398
SLC19A1 solute carrier family 19 (folate transporter), member 1 5.57191
RASGRF2 Ras protein-specific guanine nucleotide-releasing factor 2 5.55651
FSIP2 fibrous sheath interacting protein 2 5.54048
STAG3 stromal antigen 3 5.5121
NOC2L nucleolar complex associated 2 homolog (S. cerevisiae) 5.50603
LRRTM3 leucine rich repeat transmembrane neuronal 3 5.3499
FMO5 flavin containing monooxygenase 5 5.24638
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 5.16467
RPL10 ribosomal protein L10 5.1441
AKAP6 A kinase (PRKA) anchor protein 6 5.09622
CPM carboxypeptidase M 4.97078
ATP10B ATPase, class V, type 10B 4.97078
TSHR thyroid stimulating hormone receptor 4.97078
TNK1 tyrosine kinase, non-receptor, 1 4.8749
OR2H2 olfactory receptor, family 2, subfamily H, member 2 4.74721
COG5 component of oligomeric golgi complex 5 4.68248
C7ORF49 chromosome 7 open reading frame 49 4.66585
AASS aminoadipate-semialdehyde synthase 4.62808
PHIP pleckstrin homology domain interacting protein 4.53761
ATG7 autophagy related 7 4.5029
SOCS2 suppressor of cytokine signaling 2 4.50088
SCN3A sodium channel, voltage gated, type III alpha subunit 4.41993
KIAA2026 KIAA2026 4.35301
CD36 CD36 molecule (thrombospondin receptor) 4.2447
C19ORF71 chromosome 19 open reading frame 71 4.06436
HEXIM1 hexamethylene bis-acetamide inducible 1 4.04046
SLC25A26 solute carrier family 25 (S-adenosylmethionine carrier), member 26 4.02793
FAS Fas cell surface death receptor 3.96736
CALB1 calbindin 1, 28kDa 3.92091
SCAMP1 secretory carrier membrane protein 1 3.73864
ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B) 3.71839
WIPI1 WD repeat domain, phosphoinositide interacting 1 3.55628
HOXA7 homeobox A7 3.54517
TRAFD1 TRAF-type zinc finger domain containing 1 3.44026
STK25 serine/threonine kinase 25 3.32614
DNAJC9 DnaJ (Hsp40) homolog, subfamily C, member 9 3.28161
THBS1 thrombospondin 1 3.1902
ARSG arylsulfatase G 3.17253
SYCP2 synaptonemal complex protein 2 3.09262
XRCC3 X-ray repair complementing defective repair in Chinese hamster cells 3 3.05557
PAQR3 progestin and adipoQ receptor family member III 3.02095
C2ORF16 chromosome 2 open reading frame 16 3.01299
ACAP1 ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 3.00971
FAM189A2 family with sequence similarity 189, member A2 2.99875
PODXL podocalyxin-like 2.99875
TMSB4X thymosin beta 4, X-linked 2.95063
CTNS cystinosin, lysosomal cystine transporter 2.93198
C10ORF10 chromosome 10 open reading frame 10 2.92638
PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 2.85893
MPI mannose phosphate isomerase 2.80251
SIAH1 siah E3 ubiquitin protein ligase 1 2.7618
FRMD4A FERM domain containing 4A 2.75799
RBBP4 retinoblastoma binding protein 4 2.74522
ADH6 alcohol dehydrogenase 6 (class V) 2.69667
C9ORF131 chromosome 9 open reading frame 131 2.6672
CYFIP1 cytoplasmic FMR1 interacting protein 1 2.64767
MGST2 microsomal glutathione S-transferase 2 2.60747
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2.59979
BCL7A B-cell CLL/lymphoma 7A 2.56565
FAM13A family with sequence similarity 13, member A 2.55324
TCFL5 transcription factor-like 5 (basic helix-loop-helix) 2.53088
KLC4 kinesin light chain 4 2.52473
TMEM198 transmembrane protein 198 2.45696
PGAM2 phosphoglycerate mutase 2 (muscle) 2.44327
CDK13 cyclin-dependent kinase 13 2.43204
ERMP1 endoplasmic reticulum metallopeptidase 1 2.43007
ETNK2 ethanolamine kinase 2 2.42084
NUDT3 nudix (nucleoside diphosphate linked moiety X)-type motif 3 2.36936
SERINC4 serine incorporator 4 2.35347
C16ORF71 chromosome 16 open reading frame 71 2.33317
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa 2.3331
PAXIP1 PAX interacting (with transcription-activation domain) protein 1 2.32238
TBPL1 TBP-like 1 2.24184
ZNF546 zinc finger protein 546 2.23077
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 2.20504
C14ORF93 chromosome 14 open reading frame 93 2.20504
HTRA2 HtrA serine peptidase 2 2.17633
ATXN1 ataxin 1 2.17633
NQO2 NAD(P)H dehydrogenase, quinone 2 2.17491
TRPM3 transient receptor potential cation channel, subfamily M, member 3 2.17491
RGS13 regulator of G-protein signaling 13 2.12202
DNAH10 dynein, axonemal, heavy chain 10 2.09986
BDNF brain-derived neurotrophic factor 2.08953
SDR39U1 short chain dehydrogenase/reductase family 39U, member 1 2.08124
LMO7 LIM domain 7 2.06346

decreased expression

Symbol Name Standardized Value
TRIM59 tripartite motif containing 59 -20.0
INTS8 integrator complex subunit 8 -20.0
PMEL premelanosome protein -20.0
LCORL ligand dependent nuclear receptor corepressor-like -20.0
TTI2 TELO2 interacting protein 2 -17.757
ENOSF1 enolase superfamily member 1 -17.1024
EXOSC9 exosome component 9 -15.6581
POLG polymerase (DNA directed), gamma -14.9198
BOLA1 bolA family member 1 -14.0711
FANCD2OS FANCD2 opposite strand -13.5318
LRRC41 leucine rich repeat containing 41 -12.31
SPATA21 spermatogenesis associated 21 -12.2292
MLX MLX, MAX dimerization protein -12.2292
PMCH pro-melanin-concentrating hormone -11.9888
ITFG2 integrin alpha FG-GAP repeat containing 2 -11.8788
SNX32 sorting nexin 32 -11.5691
PAQR4 progestin and adipoQ receptor family member IV -10.8554
KIF7 kinesin family member 7 -9.86395
DCLRE1C DNA cross-link repair 1C -9.41796
ADCY3 adenylate cyclase 3 -9.3577
KLC1 kinesin light chain 1 -8.93064
LCTL lactase-like -8.70687
LRRC59 leucine rich repeat containing 59 -8.65938
PRICKLE3 prickle homolog 3 (Drosophila) -8.62972
GSE1 Gse1 coiled-coil protein -8.56937
CCL15 chemokine (C-C motif) ligand 15 -8.35641
OTUD4 OTU deubiquitinase 4 -8.2396
FAM166A family with sequence similarity 166, member A -7.85962
NOSTRIN nitric oxide synthase trafficking -7.80204
CLCC1 chloride channel CLIC-like 1 -7.80204
VIL1 villin 1 -7.65796
TMEM55B transmembrane protein 55B -7.40682
HIST1H2BN histone cluster 1, H2bn -7.33249
ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 -7.2023
DNASE1 deoxyribonuclease I -7.02181
PKMYT1 protein kinase, membrane associated tyrosine/threonine 1 -6.84086
KIAA0895 KIAA0895 -6.76279
TEFM transcription elongation factor, mitochondrial -6.74879
HIST1H1E histone cluster 1, H1e -6.40389
FBXO11 F-box protein 11 -6.35803
FAM149B1 family with sequence similarity 149, member B1 -6.28268
IFT80 intraflagellar transport 80 -6.1188
STXBP5L syntaxin binding protein 5-like -5.84333
ZNF771 zinc finger protein 771 -5.71701
PHYKPL 5-phosphohydroxy-L-lysine phospho-lyase -5.56554
HSD17B6 hydroxysteroid (17-beta) dehydrogenase 6 -5.46612
ZFHX3 zinc finger homeobox 3 -5.45733
SRR serine racemase -5.40715
TEX2 testis expressed 2 -5.22752
PDZD11 PDZ domain containing 11 -5.19014
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease -5.18758
LHFPL5 lipoma HMGIC fusion partner-like 5 -5.01442
MFSD11 major facilitator superfamily domain containing 11 -4.95094
MTMR2 myotubularin related protein 2 -4.94278
ZNHIT3 zinc finger, HIT-type containing 3 -4.72821
IQCK IQ motif containing K -4.64909
ORAOV1 oral cancer overexpressed 1 -4.57246
IGSF6 immunoglobulin superfamily, member 6 -4.53761
ERCC1 excision repair cross-complementation group 1 -4.49475
SLC25A35 solute carrier family 25, member 35 -4.46664
MYEF2 myelin expression factor 2 -4.35332
IFT20 intraflagellar transport 20 -4.18182
TRIM14 tripartite motif containing 14 -4.16176
NT5DC4 5'-nucleotidase domain containing 4 -4.09024
NECAB1 N-terminal EF-hand calcium binding protein 1 -3.98347
EME1 essential meiotic structure-specific endonuclease 1 -3.97759
ZNF276 zinc finger protein 276 -3.97118
CCNA2 cyclin A2 -3.96736
IFT22 intraflagellar transport 22 -3.9134
RFXANK regulatory factor X-associated ankyrin-containing protein -3.91312
UTS2 urotensin 2 -3.87547
C14ORF79 chromosome 14 open reading frame 79 -3.8657
FRMD5 FERM domain containing 5 -3.86267
ACSBG1 acyl-CoA synthetase bubblegum family member 1 -3.86195
ERN2 endoplasmic reticulum to nucleus signaling 2 -3.81578
TMPO thymopoietin -3.79955
FADS1 fatty acid desaturase 1 -3.76317
SLC39A9 solute carrier family 39, member 9 -3.76132
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -3.7448
MYO1E myosin IE -3.74185
ERCC4 excision repair cross-complementation group 4 -3.62336
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain -3.62035
ITGAE integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide) -3.59374
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble -3.57223
SUPT20H suppressor of Ty 20 homolog (S. cerevisiae) -3.54517
MCTP1 multiple C2 domains, transmembrane 1 -3.4924
ANAPC10 anaphase promoting complex subunit 10 -3.42665
OGN osteoglycin -3.35982
SYNGR2 synaptogyrin 2 -3.31022
ZC3HAV1L zinc finger CCCH-type, antiviral 1-like -3.28257
PIGL phosphatidylinositol glycan anchor biosynthesis, class L -3.24143
GNB3 guanine nucleotide binding protein (G protein), beta polypeptide 3 -3.23085
ETFDH electron-transferring-flavoprotein dehydrogenase -3.14266
UBXN6 UBX domain protein 6 -3.10044
UTP23 UTP23, small subunit (SSU) processome component, homolog (yeast) -3.06642
PBK PDZ binding kinase -3.05238
RMDN3 regulator of microtubule dynamics 3 -3.02326
ATF5 activating transcription factor 5 -3.02326
ARL10 ADP-ribosylation factor-like 10 -3.02273
CENPP centromere protein P -2.93172