Perturb_468_KD_ADAR2_SRP253895 Gene Set

Dataset PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations
Category transcriptomics
Type gene perturbation
Description KD perturbation targeting ADAR2 in A549 cell line (Study accession: SRP253895) (PerturbAtlas)
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Genes

200 genes differentially expressed following the Perturb_468_KD_ADAR2_SRP253895 gene perturbation from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.

increased expression

Symbol Name Standardized Value
CCDC85B coiled-coil domain containing 85B 20.0
HOOK2 hook microtubule-tethering protein 2 20.0
GJD3 gap junction protein, delta 3, 31.9kDa 20.0
SLC46A1 solute carrier family 46 (folate transporter), member 1 20.0
EPHA1 EPH receptor A1 20.0
HIST1H4I histone cluster 1, H4i 18.4949
IAH1 isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae) 16.8072
KRT17 keratin 17, type I 16.2188
FAS Fas cell surface death receptor 16.0212
TMEM184A transmembrane protein 184A 14.1042
ARHGAP5 Rho GTPase activating protein 5 14.0904
TMEM79 transmembrane protein 79 13.68
CXCR5 chemokine (C-X-C motif) receptor 5 13.6506
LDLRAD2 low density lipoprotein receptor class A domain containing 2 13.6148
RPL10 ribosomal protein L10 13.3116
PCED1B PC-esterase domain containing 1B 12.594
TMEM120B transmembrane protein 120B 12.5227
WDR33 WD repeat domain 33 11.7049
TMEM258 transmembrane protein 258 10.8657
MMP24-AS1 MMP24 antisense RNA 1 10.3612
BRE brain and reproductive organ-expressed (TNFRSF1A modulator) 10.0429
BCCIP BRCA2 and CDKN1A interacting protein 9.87978
EMG1 EMG1 N1-specific pseudouridine methyltransferase 9.43384
RHOBTB2 Rho-related BTB domain containing 2 9.37307
SLC5A10 solute carrier family 5 (sodium/sugar cotransporter), member 10 9.06989
CIDEB cell death-inducing DFFA-like effector b 9.00134
GRIP2 glutamate receptor interacting protein 2 8.80218
AGAP2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 8.27143
ATP6V1C2 ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2 8.09752
STAT1 signal transducer and activator of transcription 1, 91kDa 7.92026
TUBA1C tubulin, alpha 1c 7.78593
KMO kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) 7.73133
NPBWR1 neuropeptides B/W receptor 1 7.68924
TAF10 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa 7.61969
SDR39U1 short chain dehydrogenase/reductase family 39U, member 1 7.5007
BCAN brevican 7.49536
SPATA6L spermatogenesis associated 6-like 7.2349
UBXN11 UBX domain protein 11 7.15727
NME7 NME/NM23 family member 7 7.11114
RBBP4 retinoblastoma binding protein 4 7.09845
CRTAC1 cartilage acidic protein 1 6.5739
MLPH melanophilin 6.54724
UROD uroporphyrinogen decarboxylase 6.23422
YIF1B Yip1 interacting factor homolog B (S. cerevisiae) 6.18292
ABCD1 ATP-binding cassette, sub-family D (ALD), member 1 6.00608
SLC7A6OS solute carrier family 7, member 6 opposite strand 5.97933
SLC9A5 solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5 5.88875
ZNF517 zinc finger protein 517 5.86729
NQO2 NAD(P)H dehydrogenase, quinone 2 5.85217
NCAPD3 non-SMC condensin II complex, subunit D3 5.7168
FKBP15 FK506 binding protein 15, 133kDa 5.69122
NUDT6 nudix (nucleoside diphosphate linked moiety X)-type motif 6 5.60811
B3GNT4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 5.35585
WBSCR22 Williams Beuren syndrome chromosome region 22 5.32174
DENND1C DENN/MADD domain containing 1C 5.31728
MRPL43 mitochondrial ribosomal protein L43 5.29277
KLC4 kinesin light chain 4 5.2616
FANCI Fanconi anemia, complementation group I 5.24057
SAV1 salvador family WW domain containing protein 1 5.03374
PTP4A1 protein tyrosine phosphatase type IVA, member 1 5.01313
EML2 echinoderm microtubule associated protein like 2 4.97084
C14ORF166 chromosome 14 open reading frame 166 4.9684
ANKRD37 ankyrin repeat domain 37 4.91159
FBXO44 F-box protein 44 4.87576
PLTP phospholipid transfer protein 4.86866
SLC12A9 solute carrier family 12, member 9 4.79761
CACNA1A calcium channel, voltage-dependent, P/Q type, alpha 1A subunit 4.60643
C8ORF59 chromosome 8 open reading frame 59 4.55128
KRT8 keratin 8, type II 4.53814
MTCL1 microtubule crosslinking factor 1 4.52631
ENO3 enolase 3 (beta, muscle) 4.47123
FAM227B family with sequence similarity 227, member B 4.44544
FAM71E1 family with sequence similarity 71, member E1 4.36984
B3GALNT2 beta-1,3-N-acetylgalactosaminyltransferase 2 4.29623
CDC14B cell division cycle 14B 4.26382
LOC128125822 uncharacterized LOC128125822 4.25661
CCDC18 coiled-coil domain containing 18 4.24103
SPATA21 spermatogenesis associated 21 4.22238
C12ORF43 chromosome 12 open reading frame 43 4.18577
ARG2 arginase 2 4.17083
FBXL6 F-box and leucine-rich repeat protein 6 4.16355
ANKMY1 ankyrin repeat and MYND domain containing 1 3.98996
ARHGEF39 Rho guanine nucleotide exchange factor (GEF) 39 3.96552
ACOT2 acyl-CoA thioesterase 2 3.9122
TP53I13 tumor protein p53 inducible protein 13 3.90866
JUND jun D proto-oncogene 3.90155
FAM228B family with sequence similarity 228, member B 3.89363
CNTD1 cyclin N-terminal domain containing 1 3.82714
POLR2L polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa 3.8053
TSC2 tuberous sclerosis 2 3.79382
STRADB STE20-related kinase adaptor beta 3.79192
RBM7 RNA binding motif protein 7 3.78977
AGBL5 ATP/GTP binding protein-like 5 3.77227
SLC19A1 solute carrier family 19 (folate transporter), member 1 3.74657
LYPD1 LY6/PLAUR domain containing 1 3.70016
PXDC1 PX domain containing 1 3.64859
SRRM5 serine/arginine repetitive matrix 5 3.63226
CLVS1 clavesin 1 3.61569
TMEM198 transmembrane protein 198 3.61536
SLC52A2 solute carrier family 52 (riboflavin transporter), member 2 3.60797

decreased expression

Symbol Name Standardized Value
DSE dermatan sulfate epimerase -20.0
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -20.0
EXOSC9 exosome component 9 -20.0
TRIM59 tripartite motif containing 59 -20.0
HAS3 hyaluronan synthase 3 -20.0
ITFG2 integrin alpha FG-GAP repeat containing 2 -20.0
ACOT13 acyl-CoA thioesterase 13 -20.0
UTP23 UTP23, small subunit (SSU) processome component, homolog (yeast) -20.0
LRTOMT leucine rich transmembrane and O-methyltransferase domain containing -20.0
GPR39 G protein-coupled receptor 39 -20.0
CMTM7 CKLF-like MARVEL transmembrane domain containing 7 -20.0
SLC18A2 solute carrier family 18 (vesicular monoamine transporter), member 2 -20.0
ADCY3 adenylate cyclase 3 -20.0
SULF2 sulfatase 2 -18.8861
LCORL ligand dependent nuclear receptor corepressor-like -17.3019
KLC1 kinesin light chain 1 -16.8788
B9D1 B9 protein domain 1 -16.4928
ZNHIT3 zinc finger, HIT-type containing 3 -16.3979
PMEL premelanosome protein -16.1062
SAMD11 sterile alpha motif domain containing 11 -14.6468
PHKG1 phosphorylase kinase, gamma 1 (muscle) -14.3427
AKR1C1 aldo-keto reductase family 1, member C1 -13.4123
SERP1 stress-associated endoplasmic reticulum protein 1 -13.2934
DNAH11 dynein, axonemal, heavy chain 11 -13.2821
FAM166A family with sequence similarity 166, member A -12.8927
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -12.8876
INTS8 integrator complex subunit 8 -12.4741
CCDC107 coiled-coil domain containing 107 -12.4559
GLRX2 glutaredoxin 2 -12.414
RFC5 replication factor C (activator 1) 5, 36.5kDa -11.6774
IFT80 intraflagellar transport 80 -11.5854
NT5DC4 5'-nucleotidase domain containing 4 -11.3519
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -11.2727
LOC122455342 testis-specific serine/proline-rich protein -10.9831
ZNF276 zinc finger protein 276 -10.628
FANCD2OS FANCD2 opposite strand -10.3032
LRRC59 leucine rich repeat containing 59 -10.0429
ITGB1BP1 integrin beta 1 binding protein 1 -9.66886
LCTL lactase-like -9.56069
SLC51A solute carrier family 51, alpha subunit -9.10003
PLLP plasmolipin -8.98795
MLX MLX, MAX dimerization protein -8.77819
CPSF3L cleavage and polyadenylation specific factor 3-like -8.09752
KIF7 kinesin family member 7 -7.98147
FAM149B1 family with sequence similarity 149, member B1 -7.87121
C9ORF43 chromosome 9 open reading frame 43 -7.83601
KIAA0895 KIAA0895 -7.77096
KIF1B kinesin family member 1B -7.75937
PAQR4 progestin and adipoQ receptor family member IV -7.69113
SAMD14 sterile alpha motif domain containing 14 -7.3274
MCF2L2 MCF.2 cell line derived transforming sequence-like 2 -7.30132
FEN1 flap structure-specific endonuclease 1 -7.20961
ZRANB1 zinc finger, RAN-binding domain containing 1 -7.19506
ITGAE integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide) -7.12142
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain -7.04152
SLC3A1 solute carrier family 3 (amino acid transporter heavy chain), member 1 -7.03773
POLG polymerase (DNA directed), gamma -6.89223
SERBP1 SERPINE1 mRNA binding protein 1 -6.26674
MMS19 MMS19 nucleotide excision repair homolog (S. cerevisiae) -6.14148
ZC3H14 zinc finger CCCH-type containing 14 -5.96849
TEFM transcription elongation factor, mitochondrial -5.90338
CPSF4L cleavage and polyadenylation specific factor 4-like -5.87411
MYO19 myosin XIX -5.85217
HSPA8 heat shock 70kDa protein 8 -5.63992
AKR1C3 aldo-keto reductase family 1, member C3 -5.54625
GNB3 guanine nucleotide binding protein (G protein), beta polypeptide 3 -5.52541
KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) -5.42276
C5ORF45 chromosome 5 open reading frame 45 -5.35401
NECAB1 N-terminal EF-hand calcium binding protein 1 -5.33988
NOSTRIN nitric oxide synthase trafficking -5.26017
ENOSF1 enolase superfamily member 1 -5.06286
DND1 DND microRNA-mediated repression inhibitor 1 -4.95923
SLA2 Src-like-adaptor 2 -4.86891
CLCC1 chloride channel CLIC-like 1 -4.85207
DIS3L DIS3 like exosome 3'-5' exoribonuclease -4.77591
RPS29 ribosomal protein S29 -4.76266
NPM3 nucleophosmin/nucleoplasmin 3 -4.7483
ANXA1 annexin A1 -4.63887
NT5C2 5'-nucleotidase, cytosolic II -4.56041
PLEKHG6 pleckstrin homology domain containing, family G (with RhoGef domain) member 6 -4.55975
KPNB1 karyopherin (importin) beta 1 -4.52264
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -4.40619
RRM2 ribonucleotide reductase M2 -4.33713
HSPA4 heat shock 70kDa protein 4 -4.16022
GYG1 glycogenin 1 -4.09712
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -4.08714
ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B) -4.04687
TMBIM6 transmembrane BAX inhibitor motif containing 6 -4.03942
SUPT16H suppressor of Ty 16 homolog (S. cerevisiae) -4.01967
FAM122C family with sequence similarity 122C -4.0039
NCL nucleolin -3.95512
RPL4 ribosomal protein L4 -3.90114
RIC3 RIC3 acetylcholine receptor chaperone -3.89985
KIF20A kinesin family member 20A -3.88937
DOC2A double C2-like domains, alpha -3.8304
SLC35B4 solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4 -3.82195
EML5 echinoderm microtubule associated protein like 5 -3.77227
DDIT3 DNA-damage-inducible transcript 3 -3.76606
TMPO thymopoietin -3.70853
MFSD6 major facilitator superfamily domain containing 6 -3.7041