Perturb_6411_KD_PTPRN3_SRP241678 Gene Set

Dataset PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations
Category transcriptomics
Type gene perturbation
Description KD perturbation targeting PTPRN3 in gliobastoma cell U87 cell line (Study accession: SRP241678) (PerturbAtlas)
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Genes

18 genes differentially expressed following the Perturb_6411_KD_PTPRN3_SRP241678 gene perturbation from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.

increased expression

Symbol Name Standardized Value
C12ORF60 chromosome 12 open reading frame 60 3.30361
NLRC4 NLR family, CARD domain containing 4 1.5122
ZNF692 zinc finger protein 692 1.34811
GRIN2C glutamate receptor, ionotropic, N-methyl D-aspartate 2C 1.33905

decreased expression

Symbol Name Standardized Value
LCORL ligand dependent nuclear receptor corepressor-like -5.04764
ERN2 endoplasmic reticulum to nucleus signaling 2 -3.30361
LRRC41 leucine rich repeat containing 41 -3.30361
SYNC syncoilin, intermediate filament protein -2.81199
POLG polymerase (DNA directed), gamma -2.81199
ITFG2 integrin alpha FG-GAP repeat containing 2 -2.17515
PTPMT1 protein tyrosine phosphatase, mitochondrial 1 -2.03396
INTS8 integrator complex subunit 8 -1.89601
PAQR4 progestin and adipoQ receptor family member IV -1.66564
FANCD2OS FANCD2 opposite strand -1.61137
PMCH pro-melanin-concentrating hormone -1.4885
NT5DC4 5'-nucleotidase domain containing 4 -1.4885
C19ORF44 chromosome 19 open reading frame 44 -1.39398
MLX MLX, MAX dimerization protein -1.34811