Perturb_771_KD_SRRM1_SRP366559 Gene Set

Dataset PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations
Category transcriptomics
Type gene perturbation
Description KD perturbation targeting SRRM1 in acute myeloid leukemia cell THP-1 cell line (Study accession: SRP366559) (PerturbAtlas)
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Genes

168 genes differentially expressed following the Perturb_771_KD_SRRM1_SRP366559 gene perturbation from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.

increased expression

Symbol Name Standardized Value
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein) 6.30466
METRN meteorin, glial cell differentiation regulator 3.74161
RNF213 ring finger protein 213 3.61947
SH3BP5 SH3-domain binding protein 5 (BTK-associated) 3.5393
TTYH1 tweety family member 1 3.23205
RPS25 ribosomal protein S25 3.0093
AVPR2 arginine vasopressin receptor 2 3.00417
ARRDC1 arrestin domain containing 1 2.88784
CYP2R1 cytochrome P450, family 2, subfamily R, polypeptide 1 2.8505
NAV1 neuron navigator 1 2.78755
SRSF4 serine/arginine-rich splicing factor 4 2.78627
DDX51 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 2.7818
DXO decapping exoribonuclease 2.76357
PARD6G par-6 family cell polarity regulator gamma 2.68156
PCGF3 polycomb group ring finger 3 2.48743
EFR3B EFR3 homolog B (S. cerevisiae) 2.37464
PKDREJ polycystin (PKD) family receptor for egg jelly 2.27942
SHC2 SHC (Src homology 2 domain containing) transforming protein 2 2.24608
RABL6 RAB, member RAS oncogene family-like 6 2.15537
DHRS12 dehydrogenase/reductase (SDR family) member 12 2.15145
IMPDH2 IMP (inosine 5'-monophosphate) dehydrogenase 2 2.116
NFYC nuclear transcription factor Y, gamma 2.08869
MTSS1 metastasis suppressor 1 2.07665
TSPAN4 tetraspanin 4 2.04223
WDR88 WD repeat domain 88 1.98875
MIB2 mindbomb E3 ubiquitin protein ligase 2 1.96432
PCSK6 proprotein convertase subtilisin/kexin type 6 1.94669
NOXO1 NADPH oxidase organizer 1 1.89149
TLK2 tousled-like kinase 2 1.87484
DDHD2 DDHD domain containing 2 1.87147
TUT1 terminal uridylyl transferase 1, U6 snRNA-specific 1.87147
BSN bassoon presynaptic cytomatrix protein 1.85756
RDH13 retinol dehydrogenase 13 (all-trans/9-cis) 1.81205
DHODH dihydroorotate dehydrogenase (quinone) 1.76021
COL4A4 collagen, type IV, alpha 4 1.72597
CCNF cyclin F 1.72325
WDR33 WD repeat domain 33 1.71692
SPON1 spondin 1, extracellular matrix protein 1.71692
MXRA7 matrix-remodelling associated 7 1.70722
RBM25 RNA binding motif protein 25 1.68856
EIF3L eukaryotic translation initiation factor 3, subunit L 1.6878
PSMA3 proteasome (prosome, macropain) subunit, alpha type, 3 1.68755
TTC19 tetratricopeptide repeat domain 19 1.68755
MYH9 myosin, heavy chain 9, non-muscle 1.67889
MYBL1 v-myb avian myeloblastosis viral oncogene homolog-like 1 1.67749
ANKRD28 ankyrin repeat domain 28 1.66584
IL12RB2 interleukin 12 receptor, beta 2 1.64822
SLC12A4 solute carrier family 12 (potassium/chloride transporter), member 4 1.64608
TAPBP TAP binding protein (tapasin) 1.63894
NDUFC1 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa 1.60359
LPIN2 lipin 2 1.60359
BZRAP1 benzodiazepine receptor (peripheral) associated protein 1 1.56601
UCHL5 ubiquitin carboxyl-terminal hydrolase L5 1.54109
ADGRL1 adhesion G protein-coupled receptor L1 1.4851
HYI hydroxypyruvate isomerase (putative) 1.48058
C11ORF65 chromosome 11 open reading frame 65 1.47475
AP3D1 adaptor-related protein complex 3, delta 1 subunit 1.46981
MPHOSPH8 M-phase phosphoprotein 8 1.45663
POR P450 (cytochrome) oxidoreductase 1.40663
PANX2 pannexin 2 1.4058
TRRAP transformation/transcription domain-associated protein 1.37963
MAN1B1 mannosidase, alpha, class 1B, member 1 1.37328
GSTO1 glutathione S-transferase omega 1 1.3718
MAMDC4 MAM domain containing 4 1.36963
CARD9 caspase recruitment domain family, member 9 1.36823
SLC22A4 solute carrier family 22 (organic cation/zwitterion transporter), member 4 1.32295
TMSB10 thymosin beta 10 1.31068
SPON2 spondin 2, extracellular matrix protein 1.30637

decreased expression

Symbol Name Standardized Value
RPL11 ribosomal protein L11 -20.0
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B -16.0697
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -15.038
GPR37L1 G protein-coupled receptor 37 like 1 -14.5236
RPL9 ribosomal protein L9 -13.4465
EIF4A2 eukaryotic translation initiation factor 4A2 -10.9819
CSDE1 cold shock domain containing E1, RNA-binding -9.21609
SLC29A4 solute carrier family 29 (equilibrative nucleoside transporter), member 4 -8.89267
APLP2 amyloid beta (A4) precursor-like protein 2 -8.53416
SRGN serglycin -8.2957
ANXA5 annexin A5 -8.21509
ANP32A acidic (leucine-rich) nuclear phosphoprotein 32 family, member A -7.41069
CTU2 cytosolic thiouridylase subunit 2 homolog (S. pombe) -6.80903
TPT1 tumor protein, translationally-controlled 1 -6.68396
RPAIN RPA interacting protein -6.68396
TEX28 testis expressed 28 -6.60171
WBP2NL WBP2 N-terminal like -6.39126
CCDC84 coiled-coil domain containing 84 -6.10102
GFM2 G elongation factor, mitochondrial 2 -5.59427
SERBP1 SERPINE1 mRNA binding protein 1 -5.3924
APP amyloid beta (A4) precursor protein -5.11283
PABPC4 poly(A) binding protein, cytoplasmic 4 (inducible form) -5.05606
C11ORF58 chromosome 11 open reading frame 58 -4.91039
BRICD5 BRICHOS domain containing 5 -4.80231
RBMS2 RNA binding motif, single stranded interacting protein 2 -4.79814
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -4.78207
TOX4 TOX high mobility group box family member 4 -4.67192
LLGL1 lethal giant larvae homolog 1 (Drosophila) -4.40944
TMEM55B transmembrane protein 55B -4.25415
PHYKPL 5-phosphohydroxy-L-lysine phospho-lyase -4.19074
SRSF5 serine/arginine-rich splicing factor 5 -4.06505
SHMT1 serine hydroxymethyltransferase 1 (soluble) -4.04704
GPATCH11 G patch domain containing 11 -3.93313
EHBP1 EH domain binding protein 1 -3.78801
UBE2J1 ubiquitin-conjugating enzyme E2, J1 -3.78309
SMPD3 sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II) -3.75894
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -3.74161
SUPT20H suppressor of Ty 20 homolog (S. cerevisiae) -3.73972
ANGPTL6 angiopoietin-like 6 -3.65206
OSBPL9 oxysterol binding protein-like 9 -3.56306
SUMO1 small ubiquitin-like modifier 1 -3.50863
B2M beta-2-microglobulin -3.49734
BRK1 BRICK1, SCAR/WAVE actin-nucleating complex subunit -3.41418
MPRIP myosin phosphatase Rho interacting protein -3.41383
SYCP3 synaptonemal complex protein 3 -3.33665
PDIA3 protein disulfide isomerase family A, member 3 -3.33665
SLA2 Src-like-adaptor 2 -3.32204
SRSF11 serine/arginine-rich splicing factor 11 -3.28418
PHKG2 phosphorylase kinase, gamma 2 (testis) -3.04816
HSPA8 heat shock 70kDa protein 8 -3.04111
RBMX RNA binding motif protein, X-linked -3.01409
MTIF3 mitochondrial translational initiation factor 3 -3.01197
PTBP3 polypyrimidine tract binding protein 3 -3.00417
TSPO translocator protein (18kDa) -3.00417
KIF24 kinesin family member 24 -2.98735
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like -2.97025
POM121 POM121 transmembrane nucleoporin -2.97025
FBXO11 F-box protein 11 -2.97025
IPO4 importin 4 -2.94549
MX1 MX dynamin-like GTPase 1 -2.85567
GLT8D1 glycosyltransferase 8 domain containing 1 -2.84131
PHOX2A paired-like homeobox 2a -2.8289
CTNS cystinosin, lysosomal cystine transporter -2.8289
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) -2.80141
CEP295 centrosomal protein 295kDa -2.79051
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit -2.78755
DEGS2 delta(4)-desaturase, sphingolipid 2 -2.78005
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -2.78005
TAF11 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa -2.75482
AKT3 v-akt murine thymoma viral oncogene homolog 3 -2.69965
SH3GLB2 SH3-domain GRB2-like endophilin B2 -2.69308
MX2 MX dynamin-like GTPase 2 -2.67153
ABHD14A abhydrolase domain containing 14A -2.64604
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -2.63588
RLTPR RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing -2.62416
KPNB1 karyopherin (importin) beta 1 -2.58628
ATG3 autophagy related 3 -2.56488
NARS asparaginyl-tRNA synthetase -2.56488
LENG9 leukocyte receptor cluster (LRC) member 9 -2.53828
ESRRA estrogen-related receptor alpha -2.53085
TRPT1 tRNA phosphotransferase 1 -2.53085
ZEB2 zinc finger E-box binding homeobox 2 -2.53085
RSPH10B radial spoke head 10 homolog B (Chlamydomonas) -2.5198
ZNF433 zinc finger protein 433 -2.5006
TSPAN18 tetraspanin 18 -2.4878
PPCS phosphopantothenoylcysteine synthetase -2.48743
ACTR3 ARP3 actin-related protein 3 homolog (yeast) -2.47335
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 -2.47042
TRABD2A TraB domain containing 2A -2.46051
ERBB2 erb-b2 receptor tyrosine kinase 2 -2.41974
ASMTL acetylserotonin O-methyltransferase-like -2.40097
C1ORF56 chromosome 1 open reading frame 56 -2.39602
FAM192A family with sequence similarity 192, member A -2.37464
ACAT2 acetyl-CoA acetyltransferase 2 -2.32133
NAB2 NGFI-A binding protein 2 (EGR1 binding protein 2) -2.27166
MFI2 antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5 -2.22219
LRRC46 leucine rich repeat containing 46 -2.2073
CCDC175 coiled-coil domain containing 175 -2.20717
WDR38 WD repeat domain 38 -2.16611
KIF20A kinesin family member 20A -2.16028