Perturb_8669_KD_CSL_SRP115628 Gene Set

Dataset PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations
Category transcriptomics
Type gene perturbation
Description KD perturbation targeting CSL in HKC cell line (Study accession: SRP115628) (PerturbAtlas)
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Genes

200 genes differentially expressed following the Perturb_8669_KD_CSL_SRP115628 gene perturbation from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.

increased expression

Symbol Name Standardized Value
NPEPPS aminopeptidase puromycin sensitive 20.0
MX1 MX dynamin-like GTPase 1 20.0
FERMT1 fermitin family member 1 20.0
TPM1 tropomyosin 1 (alpha) 20.0
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 20.0
PCDH1 protocadherin 1 20.0
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 20.0
TGFBI transforming growth factor, beta-induced, 68kDa 20.0
CTGF connective tissue growth factor 20.0
LAMC2 laminin, gamma 2 20.0
TM4SF1 transmembrane 4 L six family member 1 20.0
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1) 20.0
HEPHL1 hephaestin-like 1 20.0
FN1 fibronectin 1 20.0
WNT5A wingless-type MMTV integration site family, member 5A 20.0
LOXL2 lysyl oxidase-like 2 20.0
HMGA2 high mobility group AT-hook 2 20.0
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 20.0
IFI27 interferon, alpha-inducible protein 27 20.0
ENC1 ectodermal-neural cortex 1 (with BTB domain) 20.0
MACC1 metastasis associated in colon cancer 1 20.0
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 20.0
UGCG UDP-glucose ceramide glucosyltransferase 20.0
TUFT1 tuftelin 1 20.0
DCBLD2 discoidin, CUB and LCCL domain containing 2 20.0
SOX4 SRY (sex determining region Y)-box 4 20.0
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 20.0
SRPX sushi-repeat containing protein, X-linked 20.0
IGF1R insulin-like growth factor 1 receptor 20.0
DYSF dysferlin 20.0
CCND1 cyclin D1 20.0
TSPAN1 tetraspanin 1 20.0
THBS1 thrombospondin 1 20.0
TAPBP TAP binding protein (tapasin) 20.0
C1ORF74 chromosome 1 open reading frame 74 20.0
MCFD2 multiple coagulation factor deficiency 2 20.0
TMEM2 transmembrane protein 2 20.0
L1CAM L1 cell adhesion molecule 20.0
TACSTD2 tumor-associated calcium signal transducer 2 20.0
INHBA inhibin, beta A 20.0
COL4A1 collagen, type IV, alpha 1 20.0
PLAUR plasminogen activator, urokinase receptor 20.0
PTPRK protein tyrosine phosphatase, receptor type, K 20.0
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 20.0
IFIT1 interferon-induced protein with tetratricopeptide repeats 1 20.0
CLDN1 claudin 1 20.0
CLDN4 claudin 4 20.0
IRF6 interferon regulatory factor 6 20.0
FOSL2 FOS-like antigen 2 20.0
GBP3 guanylate binding protein 3 20.0
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 20.0
ITGB6 integrin, beta 6 20.0
LRP1 low density lipoprotein receptor-related protein 1 20.0
IL1B interleukin 1, beta 20.0
KRT6B keratin 6B, type II 20.0
DSC2 desmocollin 2 20.0
SYNPO synaptopodin 20.0
EMP1 epithelial membrane protein 1 20.0
TMSB4X thymosin beta 4, X-linked 20.0
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 20.0
HSPG2 heparan sulfate proteoglycan 2 20.0
CTSC cathepsin C 20.0
CD24 CD24 molecule 20.0
LYPD3 LY6/PLAUR domain containing 3 20.0
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 20.0
IGF2R insulin-like growth factor 2 receptor 20.0
LPCAT2 lysophosphatidylcholine acyltransferase 2 20.0
NACC2 NACC family member 2, BEN and BTB (POZ) domain containing 20.0
SH3KBP1 SH3-domain kinase binding protein 1 20.0
MAP1B microtubule-associated protein 1B 20.0
ADAM19 ADAM metallopeptidase domain 19 20.0
KRT34 keratin 34, type I 20.0
NOTCH2 notch 2 20.0
TUBA1A tubulin, alpha 1a 20.0
FAM222B family with sequence similarity 222, member B 20.0
HEG1 heart development protein with EGF-like domains 1 20.0
FSTL1 follistatin-like 1 20.0
COL22A1 collagen, type XXII, alpha 1 20.0
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 20.0
CD82 CD82 molecule 20.0
MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3 20.0
SVIL supervillin 20.0
TGM2 transglutaminase 2 20.0
ANXA6 annexin A6 20.0
ANGPTL4 angiopoietin-like 4 20.0
MMP15 matrix metallopeptidase 15 (membrane-inserted) 20.0
MMP2 matrix metallopeptidase 2 20.0
MMP9 matrix metallopeptidase 9 20.0
MT1E metallothionein 1E 20.0
UBE2L6 ubiquitin-conjugating enzyme E2L 6 20.0
PLAT plasminogen activator, tissue 20.0
TMEM132A transmembrane protein 132A 20.0
KRT7 keratin 7, type II 20.0
TMCC3 transmembrane and coiled-coil domain family 3 20.0
ZNFX1 zinc finger, NFX1-type containing 1 20.0
TMEM189 transmembrane protein 189 20.0
PMEPA1 prostate transmembrane protein, androgen induced 1 20.0
TIMP3 TIMP metallopeptidase inhibitor 3 20.0
SEMA7A semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group) 20.0
GPRC5A G protein-coupled receptor, class C, group 5, member A 20.0

decreased expression

Symbol Name Standardized Value
SPAG5 sperm associated antigen 5 -20.0
ADAMTSL1 ADAMTS-like 1 -20.0
BIRC5 baculoviral IAP repeat containing 5 -20.0
ARHGAP11A Rho GTPase activating protein 11A -20.0
FANCD2 Fanconi anemia, complementation group D2 -20.0
CDC45 cell division cycle 45 -20.0
NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 -20.0
NME1 NME/NM23 nucleoside diphosphate kinase 1 -20.0
CCNB2 cyclin B2 -20.0
RBPJ recombination signal binding protein for immunoglobulin kappa J region -20.0
IMPA2 inositol(myo)-1(or 4)-monophosphatase 2 -20.0
BUB1B BUB1 mitotic checkpoint serine/threonine kinase B -20.0
KIF20A kinesin family member 20A -20.0
SHCBP1 SHC SH2-domain binding protein 1 -20.0
CEP55 centrosomal protein 55kDa -20.0
CCDC113 coiled-coil domain containing 113 -20.0
BRI3BP BRI3 binding protein -20.0
GMNN geminin, DNA replication inhibitor -20.0
KIF2C kinesin family member 2C -20.0
BRCA1 breast cancer 1, early onset -20.0
BRCA2 breast cancer 2, early onset -20.0
KIF23 kinesin family member 23 -20.0
PLK4 polo-like kinase 4 -20.0
POLQ polymerase (DNA directed), theta -20.0
KITLG KIT ligand -20.0
EXO1 exonuclease 1 -20.0
SH2B3 SH2B adaptor protein 3 -20.0
GINS2 GINS complex subunit 2 (Psf2 homolog) -20.0
GINS4 GINS complex subunit 4 (Sld5 homolog) -20.0
TRIP13 thyroid hormone receptor interactor 13 -20.0
SMC2 structural maintenance of chromosomes 2 -20.0
SPC24 SPC24, NDC80 kinetochore complex component -20.0
HJURP Holliday junction recognition protein -20.0
TTK TTK protein kinase -20.0
NDC80 NDC80 kinetochore complex component -20.0
WDR62 WD repeat domain 62 -20.0
ORC1 origin recognition complex, subunit 1 -20.0
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative) -20.0
CENPA centromere protein A -20.0
ASF1B anti-silencing function 1B histone chaperone -20.0
FAM83D family with sequence similarity 83, member D -20.0
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 -20.0
ECT2 epithelial cell transforming 2 -20.0
MCM10 minichromosome maintenance complex component 10 -20.0
ESPL1 extra spindle pole bodies homolog 1 (S. cerevisiae) -20.0
CDC6 cell division cycle 6 -20.0
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b -20.0
CDK1 cyclin-dependent kinase 1 -20.0
GPATCH4 G patch domain containing 4 -20.0
TONSL tonsoku-like, DNA repair protein -20.0
CKS1B CDC28 protein kinase regulatory subunit 1B -20.0
CDCA8 cell division cycle associated 8 -20.0
MAD2L1 MAD2 mitotic arrest deficient-like 1 (yeast) -20.0
MRPL10 mitochondrial ribosomal protein L10 -20.0
CLSPN claspin -20.0
BUB1 BUB1 mitotic checkpoint serine/threonine kinase -20.0
FOXE1 forkhead box E1 -20.0
ATRX alpha thalassemia/mental retardation syndrome X-linked -20.0
DIAPH3 diaphanous-related formin 3 -20.0
ATAD2 ATPase family, AAA domain containing 2 -20.0
TMEM203 transmembrane protein 203 -20.0
CDCA5 cell division cycle associated 5 -20.0
CDCA7 cell division cycle associated 7 -20.0
CDCA3 cell division cycle associated 3 -20.0
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 -20.0
FAM64A family with sequence similarity 64, member A -20.0
SKA1 spindle and kinetochore associated complex subunit 1 -20.0
SKA3 spindle and kinetochore associated complex subunit 3 -20.0
TFAP4 transcription factor AP-4 (activating enhancer binding protein 4) -20.0
RFC2 replication factor C (activator 1) 2, 40kDa -20.0
TYMS thymidylate synthetase -20.0
KNTC1 kinetochore associated 1 -20.0
FAM111B family with sequence similarity 111, member B -20.0
CDCA2 cell division cycle associated 2 -20.0
FEN1 flap structure-specific endonuclease 1 -20.0
TROAP trophinin associated protein -20.0
NCAPG non-SMC condensin I complex, subunit G -20.0
KIF18B kinesin family member 18B -20.0
ERCC6L excision repair cross-complementation group 6-like -20.0
CKAP2L cytoskeleton associated protein 2-like -20.0
HMMR hyaluronan-mediated motility receptor (RHAMM) -20.0
KIF14 kinesin family member 14 -20.0
KIF11 kinesin family member 11 -20.0
RHOG ras homolog family member G -20.0
CENPH centromere protein H -20.0
CENPW centromere protein W -20.0
NCAPH non-SMC condensin I complex, subunit H -20.0
TFAM transcription factor A, mitochondrial -20.0
NUF2 NUF2, NDC80 kinetochore complex component -20.0
PBK PDZ binding kinase -20.0
CASC5 cancer susceptibility candidate 5 -20.0
GTSE1 G-2 and S-phase expressed 1 -20.0
ZNF367 zinc finger protein 367 -20.0
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 -20.0
WDHD1 WD repeat and HMG-box DNA binding protein 1 -20.0
AURKB aurora kinase B -20.0
KIF4A kinesin family member 4A -20.0
WDR76 WD repeat domain 76 -20.0
ZWINT ZW10 interacting kinetochore protein -20.0
MELK maternal embryonic leucine zipper kinase -20.0