Perturb_8852_KD_SNHG15_SRP189766 Gene Set

Dataset PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations
Category transcriptomics
Type gene perturbation
Description KD perturbation targeting SNHG15 in Human colorectal cancer cell line LoVo cell line (Study accession: SRP189766) (PerturbAtlas)
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Genes

53 genes differentially expressed following the Perturb_8852_KD_SNHG15_SRP189766 gene perturbation from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.

increased expression

Symbol Name Standardized Value
NQO2 NAD(P)H dehydrogenase, quinone 2 5.84608
CMTM7 CKLF-like MARVEL transmembrane domain containing 7 4.51345
HIST1H4I histone cluster 1, H4i 3.41249
ARL10 ADP-ribosylation factor-like 10 3.32829
MALSU1 mitochondrial assembly of ribosomal large subunit 1 2.7688
DLEC1 deleted in lung and esophageal cancer 1 2.25511
UHRF1BP1 UHRF1 binding protein 1 2.14648
TATDN1 TatD DNase domain containing 1 2.10642
MYH11 myosin, heavy chain 11, smooth muscle 1.87657
TKFC triokinase/FMN cyclase 1.85045
NMT2 N-myristoyltransferase 2 1.73692
PKN3 protein kinase N3 1.69418
ASCC1 activating signal cointegrator 1 complex subunit 1 1.67202
ZNFX1 zinc finger, NFX1-type containing 1 1.59349
TRIM7 tripartite motif containing 7 1.56991
GLRX2 glutaredoxin 2 1.46899
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 1.41216
LYRM5 LYR motif containing 5 1.39229
ICA1 islet cell autoantigen 1, 69kDa 1.39229
SRSF9 serine/arginine-rich splicing factor 9 1.33079
MUC12 mucin 12, cell surface associated 1.33079

decreased expression

Symbol Name Standardized Value
PCSK7 proprotein convertase subtilisin/kexin type 7 -17.4023
RNF207 ring finger protein 207 -6.64541
MLX MLX, MAX dimerization protein -6.49788
MARS methionyl-tRNA synthetase -4.75827
CD72 CD72 molecule -4.03571
RHOBTB2 Rho-related BTB domain containing 2 -3.37543
CAST calpastatin -3.37543
PMPCB peptidase (mitochondrial processing) beta -3.08698
MCMDC2 minichromosome maintenance domain containing 2 -3.01784
LRRC41 leucine rich repeat containing 41 -2.94927
SSB Sjogren syndrome antigen B (autoantigen La) -2.92243
GFM2 G elongation factor, mitochondrial 2 -2.74095
TVP23A trans-golgi network vesicle protein 23 homolog A (S. cerevisiae) -2.66589
ENOSF1 enolase superfamily member 1 -2.50285
RABEP1 rabaptin, RAB GTPase binding effector protein 1 -2.29643
C6ORF136 chromosome 6 open reading frame 136 -2.09544
ATL1 atlastin GTPase 1 -1.9774
CEP68 centrosomal protein 68kDa -1.94001
ZNHIT3 zinc finger, HIT-type containing 3 -1.9129
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 -1.73789
MYH7B myosin, heavy chain 7B, cardiac muscle, beta -1.68327
SIRT3 sirtuin 3 -1.6619
PCNXL4 pecanex-like 4 (Drosophila) -1.63269
ITFG2 integrin alpha FG-GAP repeat containing 2 -1.63269
FKBP15 FK506 binding protein 15, 133kDa -1.52516
FAM69B family with sequence similarity 69, member B -1.47262
SNN stannin -1.46899
INVS inversin -1.46757
VASN vasorin -1.41216
TESK2 testis-specific kinase 2 -1.36284
TTLL9 tubulin tyrosine ligase-like family member 9 -1.36284
GPSM1 G-protein signaling modulator 1 -1.32304