| Dataset | PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations |
| Category | transcriptomics |
| Type | gene perturbation |
| Description | KD perturbation targeting FOXD1 in Human mesenchymal stem cells (MSCs) cell line (Study accession: SRP132362) (PerturbAtlas) |
| Similar Terms | |
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200 genes differentially expressed following the Perturb_9019_KD_FOXD1_SRP132362 gene perturbation from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| PRDX4 | peroxiredoxin 4 | 20.0 |
| TGFBR2 | transforming growth factor, beta receptor II (70/80kDa) | 20.0 |
| CD151 | CD151 molecule (Raph blood group) | 20.0 |
| SDF4 | stromal cell derived factor 4 | 20.0 |
| BSG | basigin (Ok blood group) | 20.0 |
| HEXB | hexosaminidase B (beta polypeptide) | 20.0 |
| TGFBI | transforming growth factor, beta-induced, 68kDa | 20.0 |
| PGAM1 | phosphoglycerate mutase 1 (brain) | 20.0 |
| SLC16A3 | solute carrier family 16 (monocarboxylate transporter), member 3 | 20.0 |
| HIF1A | hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) | 20.0 |
| P4HA2 | prolyl 4-hydroxylase, alpha polypeptide II | 20.0 |
| WSB1 | WD repeat and SOCS box containing 1 | 20.0 |
| PLK2 | polo-like kinase 2 | 20.0 |
| CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) | 20.0 |
| NABP1 | nucleic acid binding protein 1 | 20.0 |
| PRSS23 | protease, serine, 23 | 20.0 |
| CCDC80 | coiled-coil domain containing 80 | 20.0 |
| ENC1 | ectodermal-neural cortex 1 (with BTB domain) | 20.0 |
| VEGFA | vascular endothelial growth factor A | 20.0 |
| P4HB | prolyl 4-hydroxylase, beta polypeptide | 20.0 |
| MYL9 | myosin, light chain 9, regulatory | 20.0 |
| PRPS1 | phosphoribosyl pyrophosphate synthetase 1 | 20.0 |
| GRN | granulin | 20.0 |
| FN1 | fibronectin 1 | 20.0 |
| P4HA1 | prolyl 4-hydroxylase, alpha polypeptide I | 20.0 |
| LAMC2 | laminin, gamma 2 | 20.0 |
| GAS6 | growth arrest-specific 6 | 20.0 |
| HAPLN1 | hyaluronan and proteoglycan link protein 1 | 20.0 |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 | 20.0 |
| LENG8 | leukocyte receptor cluster (LRC) member 8 | 20.0 |
| GSN | gelsolin | 20.0 |
| SRPX | sushi-repeat containing protein, X-linked | 20.0 |
| PGRMC2 | progesterone receptor membrane component 2 | 20.0 |
| THBS1 | thrombospondin 1 | 20.0 |
| NOMO1 | NODAL modulator 1 | 20.0 |
| HTRA1 | HtrA serine peptidase 1 | 20.0 |
| CD46 | CD46 molecule, complement regulatory protein | 20.0 |
| MAP1LC3B | microtubule-associated protein 1 light chain 3 beta | 20.0 |
| ATP6AP2 | ATPase, H+ transporting, lysosomal accessory protein 2 | 20.0 |
| SERPINE1 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 | 20.0 |
| SERPINE2 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 | 20.0 |
| DCBLD2 | discoidin, CUB and LCCL domain containing 2 | 20.0 |
| NDST1 | N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 | 20.0 |
| PALM2-AKAP2 | PALM2-AKAP2 readthrough | 20.0 |
| ACTG2 | actin, gamma 2, smooth muscle, enteric | 20.0 |
| BNIP3 | BCL2/adenovirus E1B 19kDa interacting protein 3 | 20.0 |
| SARAF | store-operated calcium entry-associated regulatory factor | 20.0 |
| MVP | major vault protein | 20.0 |
| LDHA | lactate dehydrogenase A | 20.0 |
| APLP2 | amyloid beta (A4) precursor-like protein 2 | 20.0 |
| TIMP1 | TIMP metallopeptidase inhibitor 1 | 20.0 |
| OGT | O-linked N-acetylglucosamine (GlcNAc) transferase | 20.0 |
| HM13 | histocompatibility (minor) 13 | 20.0 |
| PGK1 | phosphoglycerate kinase 1 | 20.0 |
| CPA4 | carboxypeptidase A4 | 20.0 |
| SERINC1 | serine incorporator 1 | 20.0 |
| SERINC3 | serine incorporator 3 | 20.0 |
| ITM2B | integral membrane protein 2B | 20.0 |
| MAMDC2 | MAM domain containing 2 | 20.0 |
| DKK3 | dickkopf WNT signaling pathway inhibitor 3 | 20.0 |
| PLAU | plasminogen activator, urokinase | 20.0 |
| DAB2 | Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) | 20.0 |
| PVR | poliovirus receptor | 20.0 |
| COL1A2 | collagen, type I, alpha 2 | 20.0 |
| SERPINB7 | serpin peptidase inhibitor, clade B (ovalbumin), member 7 | 20.0 |
| GLIPR1 | GLI pathogenesis-related 1 | 20.0 |
| GPC1 | glypican 1 | 20.0 |
| CHPF | chondroitin polymerizing factor | 20.0 |
| PAM | peptidylglycine alpha-amidating monooxygenase | 20.0 |
| RGS5 | regulator of G-protein signaling 5 | 20.0 |
| CTSB | cathepsin B | 20.0 |
| PLD3 | phospholipase D family, member 3 | 20.0 |
| ITGB5 | integrin, beta 5 | 20.0 |
| LRP1 | low density lipoprotein receptor-related protein 1 | 20.0 |
| PLAT | plasminogen activator, tissue | 20.0 |
| PSAP | prosaposin | 20.0 |
| LAMP1 | lysosomal-associated membrane protein 1 | 20.0 |
| BNIP3L | BCL2/adenovirus E1B 19kDa interacting protein 3-like | 20.0 |
| ANKRD1 | ankyrin repeat domain 1 (cardiac muscle) | 20.0 |
| DLG1 | discs, large homolog 1 (Drosophila) | 20.0 |
| TMEM158 | transmembrane protein 158 (gene/pseudogene) | 20.0 |
| TGM2 | transglutaminase 2 | 20.0 |
| CAST | calpastatin | 20.0 |
| BCAP31 | B-cell receptor-associated protein 31 | 20.0 |
| ANGPTL4 | angiopoietin-like 4 | 20.0 |
| ANPEP | alanyl (membrane) aminopeptidase | 20.0 |
| JUN | jun proto-oncogene | 20.0 |
| CERCAM | cerebral endothelial cell adhesion molecule | 20.0 |
| PLOD1 | procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 | 20.0 |
| LRPAP1 | low density lipoprotein receptor-related protein associated protein 1 | 20.0 |
| IGFBP2 | insulin-like growth factor binding protein 2, 36kDa | 20.0 |
| IGFBP3 | insulin-like growth factor binding protein 3 | 20.0 |
| IGFBP7 | insulin-like growth factor binding protein 7 | 20.0 |
| IGFBP5 | insulin-like growth factor binding protein 5 | 20.0 |
| MFGE8 | milk fat globule-EGF factor 8 protein | 20.0 |
| KRT18 | keratin 18, type I | 20.0 |
| TMEM59 | transmembrane protein 59 | 20.0 |
| QSOX1 | quiescin Q6 sulfhydryl oxidase 1 | 20.0 |
| PLOD2 | procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 | 20.0 |
| SPARC | secreted protein, acidic, cysteine-rich (osteonectin) | 20.0 |
| Symbol | Name | Standardized Value |
|---|---|---|
| KIF22 | kinesin family member 22 | -20.0 |
| CDC45 | cell division cycle 45 | -20.0 |
| PKMYT1 | protein kinase, membrane associated tyrosine/threonine 1 | -20.0 |
| CCNB2 | cyclin B2 | -20.0 |
| H1F0 | H1 histone family, member 0 | -20.0 |
| ASF1B | anti-silencing function 1B histone chaperone | -20.0 |
| FAM83D | family with sequence similarity 83, member D | -20.0 |
| CDH6 | cadherin 6, type 2, K-cadherin (fetal kidney) | -20.0 |
| FAM167A | family with sequence similarity 167, member A | -20.0 |
| POLA1 | polymerase (DNA directed), alpha 1, catalytic subunit | -20.0 |
| MCM10 | minichromosome maintenance complex component 10 | -20.0 |
| CHTF18 | CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae) | -20.0 |
| TIMELESS | timeless circadian clock | -20.0 |
| FBXO5 | F-box protein 5 | -20.0 |
| PLK4 | polo-like kinase 4 | -20.0 |
| DBF4 | DBF4 zinc finger | -20.0 |
| SGOL2 | shugoshin-like 2 (S. pombe) | -20.0 |
| SHCBP1 | SHC SH2-domain binding protein 1 | -20.0 |
| KIF20B | kinesin family member 20B | -20.0 |
| BUB1B | BUB1 mitotic checkpoint serine/threonine kinase B | -20.0 |
| EPS8 | epidermal growth factor receptor pathway substrate 8 | -20.0 |
| CXCL8 | chemokine (C-X-C motif) ligand 8 | -20.0 |
| UBE2T | ubiquitin-conjugating enzyme E2T | -20.0 |
| VRK1 | vaccinia related kinase 1 | -20.0 |
| MYBL2 | v-myb avian myeloblastosis viral oncogene homolog-like 2 | -20.0 |
| SCARA3 | scavenger receptor class A, member 3 | -20.0 |
| SPC25 | SPC25, NDC80 kinetochore complex component | -20.0 |
| SPC24 | SPC24, NDC80 kinetochore complex component | -20.0 |
| MDK | midkine (neurite growth-promoting factor 2) | -20.0 |
| HJURP | Holliday junction recognition protein | -20.0 |
| TTK | TTK protein kinase | -20.0 |
| NDC80 | NDC80 kinetochore complex component | -20.0 |
| WDR62 | WD repeat domain 62 | -20.0 |
| ESCO2 | establishment of sister chromatid cohesion N-acetyltransferase 2 | -20.0 |
| PHF19 | PHD finger protein 19 | -20.0 |
| FKBP5 | FK506 binding protein 5 | -20.0 |
| IQGAP3 | IQ motif containing GTPase activating protein 3 | -20.0 |
| TRIP13 | thyroid hormone receptor interactor 13 | -20.0 |
| SOCS2 | suppressor of cytokine signaling 2 | -20.0 |
| ESPL1 | extra spindle pole bodies homolog 1 (S. cerevisiae) | -20.0 |
| CDC6 | cell division cycle 6 | -20.0 |
| TNFSF13B | tumor necrosis factor (ligand) superfamily, member 13b | -20.0 |
| DEPDC1 | DEP domain containing 1 | -20.0 |
| CDK2 | cyclin-dependent kinase 2 | -20.0 |
| MIS18BP1 | MIS18 binding protein 1 | -20.0 |
| CDKN2C | cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) | -20.0 |
| ORC6 | origin recognition complex, subunit 6 | -20.0 |
| MRPL36 | mitochondrial ribosomal protein L36 | -20.0 |
| GINS2 | GINS complex subunit 2 (Psf2 homolog) | -20.0 |
| PDE4B | phosphodiesterase 4B, cAMP-specific | -20.0 |
| KIAA1524 | KIAA1524 | -20.0 |
| MAD2L1 | MAD2 mitotic arrest deficient-like 1 (yeast) | -20.0 |
| CEMIP | cell migration inducing protein, hyaluronan binding | -20.0 |
| ADARB1 | adenosine deaminase, RNA-specific, B1 | -20.0 |
| KISS1 | KiSS-1 metastasis-suppressor | -20.0 |
| PKIA | protein kinase (cAMP-dependent, catalytic) inhibitor alpha | -20.0 |
| RFC4 | replication factor C (activator 1) 4, 37kDa | -20.0 |
| TROAP | trophinin associated protein | -20.0 |
| CASC5 | cancer susceptibility candidate 5 | -20.0 |
| SYNE2 | spectrin repeat containing, nuclear envelope 2 | -20.0 |
| RAD51AP1 | RAD51 associated protein 1 | -20.0 |
| RELN | reelin | -20.0 |
| CDCA8 | cell division cycle associated 8 | -20.0 |
| CDCA5 | cell division cycle associated 5 | -20.0 |
| FAM64A | family with sequence similarity 64, member A | -20.0 |
| SKA1 | spindle and kinetochore associated complex subunit 1 | -20.0 |
| SKA3 | spindle and kinetochore associated complex subunit 3 | -20.0 |
| BTG3 | BTG family, member 3 | -20.0 |
| FANCG | Fanconi anemia, complementation group G | -20.0 |
| FANCI | Fanconi anemia, complementation group I | -20.0 |
| CPXM1 | carboxypeptidase X (M14 family), member 1 | -20.0 |
| KNTC1 | kinetochore associated 1 | -20.0 |
| CDCA2 | cell division cycle associated 2 | -20.0 |
| CDCA3 | cell division cycle associated 3 | -20.0 |
| GTSE1 | G-2 and S-phase expressed 1 | -20.0 |
| SULF1 | sulfatase 1 | -20.0 |
| CENPK | centromere protein K | -20.0 |
| CENPU | centromere protein U | -20.0 |
| EZH2 | enhancer of zeste 2 polycomb repressive complex 2 subunit | -20.0 |
| MDFI | MyoD family inhibitor | -20.0 |
| SPAG5 | sperm associated antigen 5 | -20.0 |
| HIC1 | hypermethylated in cancer 1 | -20.0 |
| NPTX1 | neuronal pentraxin I | -20.0 |
| PTGS2 | prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) | -20.0 |
| GMNN | geminin, DNA replication inhibitor | -20.0 |
| KIF2C | kinesin family member 2C | -20.0 |
| PSRC1 | proline/serine-rich coiled-coil 1 | -20.0 |
| KIF15 | kinesin family member 15 | -20.0 |
| KIF14 | kinesin family member 14 | -20.0 |
| GULP1 | GULP, engulfment adaptor PTB domain containing 1 | -20.0 |
| AURKB | aurora kinase B | -20.0 |
| KIF4A | kinesin family member 4A | -20.0 |
| NCAPH | non-SMC condensin I complex, subunit H | -20.0 |
| PDGFA | platelet-derived growth factor alpha polypeptide | -20.0 |
| KIF18A | kinesin family member 18A | -20.0 |
| KIF18B | kinesin family member 18B | -20.0 |
| CKAP2L | cytoskeleton associated protein 2-like | -20.0 |
| TCF19 | transcription factor 19 | -20.0 |
| HMMR | hyaluronan-mediated motility receptor (RHAMM) | -20.0 |
| BRCA1 | breast cancer 1, early onset | -20.0 |
