Pexidartinib (hydrochloride)_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pexidartinib (hydrochloride) perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pexidartinib (hydrochloride)_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.22281
FBN1 fibrillin 1 0.105971
LOX lysyl oxidase 0.0896513
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0838403
DLG1 discs, large homolog 1 (Drosophila) 0.0797837
FNDC3B fibronectin type III domain containing 3B 0.075546
LOXL2 lysyl oxidase-like 2 0.0723153
CD44 CD44 molecule (Indian blood group) 0.0677575
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0657504
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0656461
THBS2 thrombospondin 2 0.0607327
SPTBN1 spectrin, beta, non-erythrocytic 1 0.055718
PSD3 pleckstrin and Sec7 domain containing 3 0.0551672
FLNB filamin B, beta 0.0528989
TRIO trio Rho guanine nucleotide exchange factor 0.0504052
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.048309
NFE2L1 nuclear factor, erythroid 2-like 1 0.0448375
GPC6 glypican 6 0.0446449
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0443698
ATP13A3 ATPase type 13A3 0.0439673
SLC22A23 solute carrier family 22, member 23 0.0426562
ZBTB20 zinc finger and BTB domain containing 20 0.0423881
FTH1 ferritin, heavy polypeptide 1 0.0417918
STC1 stanniocalcin 1 0.0406133
DST dystonin 0.0390955
SBF2 SET binding factor 2 0.0385957
C1D C1D nuclear receptor corepressor 0.0384658
DPYSL3 dihydropyrimidinase-like 3 0.0382862
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0367901
PRELID2 PRELI domain containing 2 0.036512
MYOF myoferlin 0.0363058
ERRFI1 ERBB receptor feedback inhibitor 1 0.0359416
NDRG1 N-myc downstream regulated 1 0.0357197
RHOBTB3 Rho-related BTB domain containing 3 0.03423
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0330223
ELL2 elongation factor, RNA polymerase II, 2 0.0315313
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0310652
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0304637
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0302075
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0299155
APP amyloid beta (A4) precursor protein 0.0296682
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.028921
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0288847
ARRDC3 arrestin domain containing 3 0.0288594
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0286403
AUTS2 autism susceptibility candidate 2 0.0278563
BHLHE40 basic helix-loop-helix family, member e40 0.0267786
C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 0.026647
YEATS2 YEATS domain containing 2 0.0256342
SEPTIN9 septin 9 0.0247174
TMOD1 tropomodulin 1 0.0245122
ZEB2 zinc finger E-box binding homeobox 2 0.024227
COL3A1 collagen, type III, alpha 1 0.0239222
STK10 serine/threonine kinase 10 0.0237887
ZNF292 zinc finger protein 292 0.0236778
SP3 Sp3 transcription factor 0.0235045
MXI1 MAX interactor 1, dimerization protein 0.023253
MEF2A myocyte enhancer factor 2A 0.0231547
OPTN optineurin 0.0226908
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.022681
ANK2 ankyrin 2, neuronal 0.0226297
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0225961
TDRD7 tudor domain containing 7 0.0225544
ATXN1 ataxin 1 0.0224806
ADAM17 ADAM metallopeptidase domain 17 0.0223974
KLF6 Kruppel-like factor 6 0.0221428
WDFY1 WD repeat and FYVE domain containing 1 0.0221356
IQGAP1 IQ motif containing GTPase activating protein 1 0.022066
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0218032
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0215908
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.021514
ANKRD36 ankyrin repeat domain 36 0.0213235
RUNX1 runt-related transcription factor 1 0.0212582
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.0210848
BACE2 beta-site APP-cleaving enzyme 2 0.020987
MBNL2 muscleblind-like splicing regulator 2 0.0209847
SOD2 superoxide dismutase 2, mitochondrial 0.0209223
ARL15 ADP-ribosylation factor-like 15 0.0207931
ANXA2 annexin A2 0.0207823
ESYT2 extended synaptotagmin-like protein 2 0.0207031
NAMPT nicotinamide phosphoribosyltransferase 0.0205778
MB21D2 Mab-21 domain containing 2 0.020574
ADGRE5 adhesion G protein-coupled receptor E5 0.0205033
FNIP1 folliculin interacting protein 1 0.0204157
FLNA filamin A, alpha 0.0202109
DPYSL2 dihydropyrimidinase-like 2 0.0200439
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0200245
KIFAP3 kinesin-associated protein 3 0.0198862
EPAS1 endothelial PAS domain protein 1 0.0198078
PCGF5 polycomb group ring finger 5 0.0196971
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0195369
EEF2 eukaryotic translation elongation factor 2 0.0194183
SOX9 SRY (sex determining region Y)-box 9 0.0193866
GLS2 glutaminase 2 (liver, mitochondrial) 0.0192516
CD109 CD109 molecule 0.0192301
WWTR1 WW domain containing transcription regulator 1 0.0187649
LDHA lactate dehydrogenase A 0.0185542
SVIL supervillin 0.0184255
RNF213 ring finger protein 213 0.0182658
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0180424

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.167098
TMSB10 thymosin beta 10 -0.145232
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.121596
CDH13 cadherin 13 -0.103127
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.103086
IGFBP3 insulin-like growth factor binding protein 3 -0.0884184
FN1 fibronectin 1 -0.0874864
AHNAK AHNAK nucleoprotein -0.076546
ABI3BP ABI family, member 3 (NESH) binding protein -0.0697411
S100A10 S100 calcium binding protein A10 -0.06749
LMNA lamin A/C -0.0642782
COL5A1 collagen, type V, alpha 1 -0.0636495
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0616573
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0556015
PTMA prothymosin, alpha -0.0539852
MAP1B microtubule-associated protein 1B -0.0539088
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.052125
POTEF POTE ankyrin domain family, member F -0.0519806
CSTB cystatin B (stefin B) -0.047681
S100A6 S100 calcium binding protein A6 -0.0468376
CANX calnexin -0.0461831
DIRAS3 DIRAS family, GTP-binding RAS-like 3 -0.0428098
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0411719
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0409636
TPM4 tropomyosin 4 -0.0371793
ASPH aspartate beta-hydroxylase -0.0357764
TAGLN2 transgelin 2 -0.0320838
PRSS23 protease, serine, 23 -0.0315895
SLC39A11 solute carrier family 39, member 11 -0.0305148
FLT1 fms-related tyrosine kinase 1 -0.0303331
FSTL1 follistatin-like 1 -0.0298164
DGKG diacylglycerol kinase, gamma 90kDa -0.0295078
PLAT plasminogen activator, tissue -0.0282109
ALCAM activated leukocyte cell adhesion molecule -0.0278649
IL7R interleukin 7 receptor -0.0277901
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0277702
CYTH3 cytohesin 3 -0.0276005
SUCNR1 succinate receptor 1 -0.0275226
CAVIN1 caveolae associated protein 1 -0.0266257
SORBS2 sorbin and SH3 domain containing 2 -0.0262752
TMSB4X thymosin beta 4, X-linked -0.0261798
RRBP1 ribosome binding protein 1 -0.0253529
PBX3 pre-B-cell leukemia homeobox 3 -0.0253362
LRRC17 leucine rich repeat containing 17 -0.024718
CCND1 cyclin D1 -0.0240845
MACF1 microtubule-actin crosslinking factor 1 -0.0238747
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0238706
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 -0.0237318
SAMD9 sterile alpha motif domain containing 9 -0.0237087
TPT1 tumor protein, translationally-controlled 1 -0.0234022
PLXNA2 plexin A2 -0.0233318
KRT81 keratin 81, type II -0.0232833
MCL1 myeloid cell leukemia 1 -0.0232602
FMN2 formin 2 -0.023112
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0230754
SRPK2 SRSF protein kinase 2 -0.0226172
TUBB4B tubulin, beta 4B class IVb -0.0223581
MT2A metallothionein 2A -0.0220562
CALR calreticulin -0.0218778
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.021592
SEC61G Sec61 gamma subunit -0.021212
RIGI RNA sensor RIG-I -0.0211983
SLC38A1 solute carrier family 38, member 1 -0.0207763
S100A4 S100 calcium binding protein A4 -0.0205126
RASAL2 RAS protein activator like 2 -0.0204989
PODXL podocalyxin-like -0.0203501
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.0202769
SPDL1 spindle apparatus coiled-coil protein 1 -0.0199021
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0195385
CKAP4 cytoskeleton-associated protein 4 -0.0194244
SH3KBP1 SH3-domain kinase binding protein 1 -0.0182643
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.01821
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0179988
PRRC2C proline-rich coiled-coil 2C -0.017983
IARS1 isoleucyl-tRNA synthetase 1 -0.0179661
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0178371
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0176989
COL1A1 collagen, type I, alpha 1 -0.0176324
TM4SF1 transmembrane 4 L six family member 1 -0.0175821
HSPB1 heat shock 27kDa protein 1 -0.0173069
MRPS6 mitochondrial ribosomal protein S6 -0.0171851
ISG15 ISG15 ubiquitin-like modifier -0.0169947
OASL 2'-5'-oligoadenylate synthetase-like -0.0168511
MED13L mediator complex subunit 13-like -0.0168273
S100A11 S100 calcium binding protein A11 -0.0166148
CD99 CD99 molecule -0.0164992
SMC4 structural maintenance of chromosomes 4 -0.0164192
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0163575
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0163547
TBCA tubulin folding cofactor A -0.0163267
KDM4B lysine (K)-specific demethylase 4B -0.0162801
ANKRD11 ankyrin repeat domain 11 -0.016231
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0161741
B2M beta-2-microglobulin -0.0161625
H3-3B H3.3 histone B -0.0159445
TPM1 tropomyosin 1 (alpha) -0.0158617
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough -0.0157689
EFNA5 ephrin-A5 -0.0157631
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0156473
C12ORF75 chromosome 12 open reading frame 75 -0.0155899