Pexidartinib (hydrochloride)_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pexidartinib (hydrochloride) perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pexidartinib (hydrochloride)_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NLGN1 neuroligin 1 0.102139
EEF2 eukaryotic translation elongation factor 2 0.0938916
DST dystonin 0.0740126
PDGFC platelet derived growth factor C 0.0675832
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0664212
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1 0.0613532
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0595121
ERBB4 erb-b2 receptor tyrosine kinase 4 0.056715
CLDN1 claudin 1 0.0565637
PDE4D phosphodiesterase 4D, cAMP-specific 0.0553512
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.055348
NEBL nebulette 0.054493
TENM3 teneurin transmembrane protein 3 0.0542505
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0530415
NR5A2 nuclear receptor subfamily 5, group A, member 2 0.0515027
PCDH7 protocadherin 7 0.0440008
HMGA1 high mobility group AT-hook 1 0.0373079
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0369204
LDHA lactate dehydrogenase A 0.0349862
PFN1 profilin 1 0.0345969
PCBP2 poly(rC) binding protein 2 0.033911
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.032988
ANXA1 annexin A1 0.0327814
EHBP1 EH domain binding protein 1 0.031915
PLK2 polo-like kinase 2 0.030609
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0302696
EPHA6 EPH receptor A6 0.0292574
PCBP1 poly(rC) binding protein 1 0.0287419
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0284718
DTNA dystrobrevin, alpha 0.0278729
NUP58 nucleoporin 58 0.0275242
NHSL1 NHS-like 1 0.0261631
TBK1 TANK-binding kinase 1 0.0260294
KLF6 Kruppel-like factor 6 0.0259676
FAT1 FAT atypical cadherin 1 0.0258046
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0257873
FOXM1 forkhead box M1 0.0247815
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0246995
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0244078
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) 0.0238431
PEG10 paternally expressed 10 0.023359
ADGRG6 adhesion G protein-coupled receptor G6 0.0232064
MTAP methylthioadenosine phosphorylase 0.0228317
P3H2 prolyl 3-hydroxylase 2 0.0224802
NFE2L1 nuclear factor, erythroid 2-like 1 0.0221497
EDARADD EDAR-associated death domain 0.0220731
TBC1D5 TBC1 domain family, member 5 0.0220485
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 0.0218915
PRR16 proline rich 16 0.0210905
ECT2 epithelial cell transforming 2 0.0210302
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) 0.0208454
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0206231
BIRC6 baculoviral IAP repeat containing 6 0.0205217
FLNA filamin A, alpha 0.0201045
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0198694
PRELID2 PRELI domain containing 2 0.0194966
YEATS2 YEATS domain containing 2 0.0194329
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0191006
RAD51B RAD51 paralog B 0.0190657
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0185597
GARS1 glycyl-tRNA synthetase 1 0.0183355
ZFP64 ZFP64 zinc finger protein 0.0179868
TAS2R14 taste receptor, type 2, member 14 0.0175428
RACK1 receptor for activated C kinase 1 0.0172689
DLGAP1 discs, large (Drosophila) homolog-associated protein 1 0.0171098
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0167028
CCT2 chaperonin containing TCP1, subunit 2 (beta) 0.0166639
CARD16 caspase recruitment domain family, member 16 0.0165141
MAP1B microtubule-associated protein 1B 0.0163617
BCHE butyrylcholinesterase 0.0163143
KCMF1 potassium channel modulatory factor 1 0.0161822
FSTL5 follistatin-like 5 0.0160621
WDR43 WD repeat domain 43 0.0159777
FASN fatty acid synthase 0.0159645
WNK1 WNK lysine deficient protein kinase 1 0.0154974
CLDND1 claudin domain containing 1 0.0154703
NECTIN3 nectin cell adhesion molecule 3 0.0154068
TMEM106B transmembrane protein 106B 0.015231
PLP2 proteolipid protein 2 (colonic epithelium-enriched) 0.014692
KSR2 kinase suppressor of ras 2 0.0146778
CCDC91 coiled-coil domain containing 91 0.0146737
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.014648
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0145333
CDV3 CDV3 homolog (mouse) 0.0144719
ATXN2L ataxin 2-like 0.0143845
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 0.0142168
PGK1 phosphoglycerate kinase 1 0.0141877
ACTG1 actin gamma 1 0.0141831
HDAC9 histone deacetylase 9 0.0141571
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0137857
RBBP4 retinoblastoma binding protein 4 0.0136823
KIF18B kinesin family member 18B 0.0136791
GOLT1A golgi transport 1A 0.0136535
EXOC4 exocyst complex component 4 0.0136394
MED13L mediator complex subunit 13-like 0.0134358
RAP1GDS1 RAP1, GTP-GDP dissociation stimulator 1 0.0133779
ZBTB20 zinc finger and BTB domain containing 20 0.0133208
MTCL1 microtubule crosslinking factor 1 0.013182
YAP1 Yes-associated protein 1 0.0131508
TGM2 transglutaminase 2 0.0130951

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.270431
AREG amphiregulin -0.190155
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.132421
PTMA prothymosin, alpha -0.130561
TMSB10 thymosin beta 10 -0.0904009
FTL ferritin, light polypeptide -0.0899946
RPS6 ribosomal protein S6 -0.0861094
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.077302
ATP5F1B ATP synthase F1 subunit beta -0.0714667
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0645656
TPT1 tumor protein, translationally-controlled 1 -0.0615918
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0611969
AHNAK AHNAK nucleoprotein -0.054768
RPL19 ribosomal protein L19 -0.0529498
RPL38 ribosomal protein L38 -0.0526878
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0526426
RPS13 ribosomal protein S13 -0.0525687
RPLP2 ribosomal protein, large, P2 -0.0510814
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0501867
RPL8 ribosomal protein L8 -0.0496656
RPS27A ribosomal protein S27a -0.0492559
RPS21 ribosomal protein S21 -0.0480005
CPOX coproporphyrinogen oxidase -0.0474146
NIPBL Nipped-B homolog (Drosophila) -0.0467138
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0465271
RPS23 ribosomal protein S23 -0.0462029
RPS8 ribosomal protein S8 -0.0453281
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0445635
SETD5 SET domain containing 5 -0.0433362
RPS29 ribosomal protein S29 -0.0432496
YBX3 Y box binding protein 3 -0.0422635
MYL12B myosin, light chain 12B, regulatory -0.0420266
ASPH aspartate beta-hydroxylase -0.0416295
EIF1 eukaryotic translation initiation factor 1 -0.0415343
NCAPD2 non-SMC condensin I complex, subunit D2 -0.041532
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.039866
CANX calnexin -0.0394895
MMP12 matrix metallopeptidase 12 -0.0384036
TRMT112 tRNA methyltransferase 11-2 homolog (S. cerevisiae) -0.03812
FXR1 fragile X mental retardation, autosomal homolog 1 -0.038041
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0378908
RPL12 ribosomal protein L12 -0.0375787
CNRIP1 cannabinoid receptor interacting protein 1 -0.0372514
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0371419
RPS15 ribosomal protein S15 -0.0359255
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa -0.0358633
NAP1L1 nucleosome assembly protein 1-like 1 -0.0353768
GOLGB1 golgin B1 -0.0349168
H1-0 H1.0 linker histone -0.0346989
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0343187
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0343038
RPL11 ribosomal protein L11 -0.0342297
SQSTM1 sequestosome 1 -0.0339143
RPLP1 ribosomal protein, large, P1 -0.0338586
RPL36A ribosomal protein L36a -0.0336316
RRM2 ribonucleotide reductase M2 -0.0334291
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.033278
RPL31 ribosomal protein L31 -0.0330289
HSPB1 heat shock 27kDa protein 1 -0.0325416
BIRC2 baculoviral IAP repeat containing 2 -0.03243
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0318649
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0314201
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0311087
RPS25 ribosomal protein S25 -0.0309943
RPS10 ribosomal protein S10 -0.0307352
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0299709
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.0299208
KDM3A lysine (K)-specific demethylase 3A -0.0295644
RAB1A RAB1A, member RAS oncogene family -0.0295369
RPL34 ribosomal protein L34 -0.029428
ANKHD1 ankyrin repeat and KH domain containing 1 -0.029225
OGA O-GlcNAcase -0.0292029
HDLBP high density lipoprotein binding protein -0.0291447
GOLGA4 golgin A4 -0.0290835
RPL26 ribosomal protein L26 -0.0288098
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0286536
RPS2 ribosomal protein S2 -0.028222
RPS19 ribosomal protein S19 -0.028162
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0279385
H3-3B H3.3 histone B -0.0278989
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0278795
RSL24D1 ribosomal L24 domain containing 1 -0.0278623
RAB10 RAB10, member RAS oncogene family -0.0276955
RPL32 ribosomal protein L32 -0.0276271
RPS24 ribosomal protein S24 -0.0274467
RPS5 ribosomal protein S5 -0.026101
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.026089
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0256699
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0254904
RPL9 ribosomal protein L9 -0.0251221
TUBA1B tubulin, alpha 1b -0.025034
RPL7 ribosomal protein L7 -0.0249418
RPL36 ribosomal protein L36 -0.0248958
IL6ST interleukin 6 signal transducer -0.0246571
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0246144
UBC ubiquitin C -0.0245432
AKAP12 A kinase (PRKA) anchor protein 12 -0.0245236
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0243708
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0243172
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0243052