Pexidartinib (hydrochloride)_C-33 A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pexidartinib (hydrochloride) perturbation in C-33 A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pexidartinib (hydrochloride)_C-33 A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TENM3 teneurin transmembrane protein 3 0.164946
SLIT2 slit homolog 2 (Drosophila) 0.14344
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.115768
ZNF608 zinc finger protein 608 0.104311
NR5A2 nuclear receptor subfamily 5, group A, member 2 0.103618
NEBL nebulette 0.101752
ATP11A ATPase, class VI, type 11A 0.0915117
EEF2 eukaryotic translation elongation factor 2 0.0857986
FMNL2 formin-like 2 0.0824098
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0483955
FOXO3 forkhead box O3 0.0473863
FAT1 FAT atypical cadherin 1 0.0467685
DST dystonin 0.0444837
COL5A2 collagen, type V, alpha 2 0.0414423
TRIO trio Rho guanine nucleotide exchange factor 0.0391639
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0390441
KMT2C lysine (K)-specific methyltransferase 2C 0.0386917
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0382786
NUP58 nucleoporin 58 0.0378607
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 0.0376543
YEATS2 YEATS domain containing 2 0.0360767
RAD51B RAD51 paralog B 0.0350298
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0345852
SBF2 SET binding factor 2 0.0336935
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.033499
SNCA synuclein, alpha (non A4 component of amyloid precursor) 0.0333102
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0330356
ARHGAP32 Rho GTPase activating protein 32 0.0329969
PIAS2 protein inhibitor of activated STAT, 2 0.0325126
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0316926
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0314838
TBC1D32 TBC1 domain family, member 32 0.03137
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0313441
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0303726
ANKRD36 ankyrin repeat domain 36 0.029838
ATRN attractin 0.0285149
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0278917
PCBP2 poly(rC) binding protein 2 0.0271059
TTC28 tetratricopeptide repeat domain 28 0.026737
KIF1B kinesin family member 1B 0.0264556
NGLY1 N-glycanase 1 0.0262939
VMP1 vacuole membrane protein 1 0.0256029
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0249096
CAMTA1 calmodulin binding transcription activator 1 0.0248653
WEE1 WEE1 G2 checkpoint kinase 0.0248505
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0247131
WDFY3 WD repeat and FYVE domain containing 3 0.0246289
USP9X ubiquitin specific peptidase 9, X-linked 0.0245416
PTK2 protein tyrosine kinase 2 0.0240792
ADGRG6 adhesion G protein-coupled receptor G6 0.0240339
ZNF292 zinc finger protein 292 0.0240232
FLNA filamin A, alpha 0.0239906
AHCTF1 AT hook containing transcription factor 1 0.0236494
TUT4 terminal uridylyl transferase 4 0.0236405
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0235945
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0229343
GYS1 glycogen synthase 1 (muscle) 0.0228716
TBK1 TANK-binding kinase 1 0.0227881
EFNA5 ephrin-A5 0.0227843
SOX5 SRY (sex determining region Y)-box 5 0.0227389
VEGFC vascular endothelial growth factor C 0.0225413
CCNY cyclin Y 0.0222919
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.0222348
SRRM2 serine/arginine repetitive matrix 2 0.0220973
SET SET nuclear proto-oncogene 0.0217653
MXI1 MAX interactor 1, dimerization protein 0.0216572
MCTP1 multiple C2 domains, transmembrane 1 0.021424
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0213443
PTCH1 patched 1 0.021337
SMAD4 SMAD family member 4 0.0212716
TAS2R14 taste receptor, type 2, member 14 0.020989
PGAP1 post-GPI attachment to proteins 1 0.020979
N4BP2L2 NEDD4 binding protein 2-like 2 0.0209523
ZNF638 zinc finger protein 638 0.0207923
HSPA8 heat shock 70kDa protein 8 0.0204751
ZCCHC7 zinc finger, CCHC domain containing 7 0.0203298
RHOA ras homolog family member A 0.0202039
VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae) 0.0200558
RTN4 reticulon 4 0.0199806
CACNB4 calcium channel, voltage-dependent, beta 4 subunit 0.0199622
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.019949
RPS2 ribosomal protein S2 0.0197464
PDE7A phosphodiesterase 7A 0.019671
KLC1 kinesin light chain 1 0.0195391
CARMIL1 capping protein regulator and myosin 1 linker 1 0.0195236
ARFGEF3 ARFGEF family member 3 0.0195123
KDM6A lysine (K)-specific demethylase 6A 0.0194754
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0193361
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0190987
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0190904
HELZ helicase with zinc finger 0.0189572
RNF150 ring finger protein 150 0.0188071
ZNF207 zinc finger protein 207 0.0186721
NBAS neuroblastoma amplified sequence 0.0186496
WNK1 WNK lysine deficient protein kinase 1 0.0185232
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0184827
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0184071
NFE2L1 nuclear factor, erythroid 2-like 1 0.0183711
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0183579
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0181731

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.203815
PTMA prothymosin, alpha -0.156534
RPS6 ribosomal protein S6 -0.103376
IFI6 interferon, alpha-inducible protein 6 -0.0996637
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.097535
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0964905
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0908129
RPLP1 ribosomal protein, large, P1 -0.0860389
RPS8 ribosomal protein S8 -0.0768756
TMSB10 thymosin beta 10 -0.0761198
ACTG1 actin gamma 1 -0.0759103
RPS21 ribosomal protein S21 -0.0743753
RPL34 ribosomal protein L34 -0.0732628
RPS24 ribosomal protein S24 -0.0646889
TPT1 tumor protein, translationally-controlled 1 -0.0631158
RPLP2 ribosomal protein, large, P2 -0.0599315
RPS19 ribosomal protein S19 -0.0598868
RPL12 ribosomal protein L12 -0.0591134
RPL32 ribosomal protein L32 -0.0586805
HMGB1 high mobility group box 1 -0.0566653
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0562811
RPL11 ribosomal protein L11 -0.0551779
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0542117
H1-0 H1.0 linker histone -0.0526012
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0516901
RPL23 ribosomal protein L23 -0.0515883
RPS11 ribosomal protein S11 -0.0505555
RPL19 ribosomal protein L19 -0.0504017
MYL12B myosin, light chain 12B, regulatory -0.0497378
RPL31 ribosomal protein L31 -0.0492763
RPS13 ribosomal protein S13 -0.0476666
B2M beta-2-microglobulin -0.0474253
RPS3 ribosomal protein S3 -0.0473019
KDM3A lysine (K)-specific demethylase 3A -0.0472845
RPL28 ribosomal protein L28 -0.0468632
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0461369
RPS29 ribosomal protein S29 -0.0453464
RPS27A ribosomal protein S27a -0.0448305
RPS5 ribosomal protein S5 -0.0437473
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0433495
RPL38 ribosomal protein L38 -0.0426758
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0426048
RPL35A ribosomal protein L35a -0.0425336
DEK DEK proto-oncogene -0.0424947
RPS25 ribosomal protein S25 -0.0420682
RPL9 ribosomal protein L9 -0.0412193
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0407989
S100A9 S100 calcium binding protein A9 -0.0405344
RPS15 ribosomal protein S15 -0.0405306
RPL36 ribosomal protein L36 -0.0399868
FTL ferritin, light polypeptide -0.0398445
RPL26 ribosomal protein L26 -0.0397947
NAP1L1 nucleosome assembly protein 1-like 1 -0.0392873
GNAS GNAS complex locus -0.0390433
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0389783
RPS23 ribosomal protein S23 -0.0389552
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0384088
RPS16 ribosomal protein S16 -0.038105
RPS4X ribosomal protein S4, X-linked -0.0380155
RPLP0 ribosomal protein, large, P0 -0.0354384
RPL7A ribosomal protein L7a -0.0353978
ISG15 ISG15 ubiquitin-like modifier -0.0351491
VIM vimentin -0.0344107
RPL5 ribosomal protein L5 -0.0341387
RPL8 ribosomal protein L8 -0.0328673
CADM2 cell adhesion molecule 2 -0.0328079
VDAC1 voltage-dependent anion channel 1 -0.0327228
TPI1 triosephosphate isomerase 1 -0.0319685
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0317192
RPL27A ribosomal protein L27a -0.0313328
SOX4 SRY (sex determining region Y)-box 4 -0.0312113
MAP3K14 mitogen-activated protein kinase kinase kinase 14 -0.0311469
TUBB tubulin, beta class I -0.0302696
CANX calnexin -0.0301632
RPL35 ribosomal protein L35 -0.02998
ATP5F1E ATP synthase F1 subunit epsilon -0.0294378
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0289505
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0284725
SEPTIN7 septin 7 -0.0284044
CELF2 CUGBP, Elav-like family member 2 -0.0283989
STAU1 staufen double-stranded RNA binding protein 1 -0.0281559
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0280644
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0278279
RRBP1 ribosome binding protein 1 -0.0278219
MT2A metallothionein 2A -0.0277187
RPL36A ribosomal protein L36a -0.0277079
RSL1D1 ribosomal L1 domain containing 1 -0.0276747
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -0.0275914
HMGB2 high mobility group box 2 -0.0275902
FAM162A family with sequence similarity 162, member A -0.0275304
RIGI RNA sensor RIG-I -0.0274261
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0273108
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0270483
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0270462
PNISR PNN-interacting serine/arginine-rich protein -0.0268868
ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein -0.0263471
HLA-B major histocompatibility complex, class I, B -0.0261883
PKM pyruvate kinase, muscle -0.0260379
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0257219
CAVIN1 caveolae associated protein 1 -0.0254527