Pexidartinib (hydrochloride)_C32 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pexidartinib (hydrochloride) perturbation in C32 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pexidartinib (hydrochloride)_C32 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.139908
LEF1 lymphoid enhancer-binding factor 1 0.0971901
PRELID2 PRELI domain containing 2 0.0790922
NAMPT nicotinamide phosphoribosyltransferase 0.0780737
TMEM178B transmembrane protein 178B 0.0709311
IGFBP3 insulin-like growth factor binding protein 3 0.0597592
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0594548
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0579584
ASPH aspartate beta-hydroxylase 0.0450953
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0413882
ICAM1 intercellular adhesion molecule 1 0.0410232
TNNC1 troponin C type 1 (slow) 0.0395323
SETBP1 SET binding protein 1 0.0386527
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.038467
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0378563
EXOC4 exocyst complex component 4 0.0367373
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0353377
NAV2 neuron navigator 2 0.034594
PHF21A PHD finger protein 21A 0.0343721
ATXN1 ataxin 1 0.0330102
PCDH7 protocadherin 7 0.0327507
RNF150 ring finger protein 150 0.031638
BHLHE40 basic helix-loop-helix family, member e40 0.0316223
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 0.0315523
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0273021
APP amyloid beta (A4) precursor protein 0.0271327
ARRDC3 arrestin domain containing 3 0.0268818
EEF2 eukaryotic translation elongation factor 2 0.0268304
FLNA filamin A, alpha 0.0267338
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0261729
SPRED1 sprouty-related, EVH1 domain containing 1 0.0258535
RNASE12 ribonuclease, RNase A family, 12 (non-active) 0.0257519
FRMD6 FERM domain containing 6 0.0257308
PDE10A phosphodiesterase 10A 0.0255062
NEK7 NIMA-related kinase 7 0.025235
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0247386
IGF1R insulin-like growth factor 1 receptor 0.0244581
CD109 CD109 molecule 0.0243497
RNF213 ring finger protein 213 0.0236122
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0235337
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.0231729
UBASH3B ubiquitin associated and SH3 domain containing B 0.023159
NAV1 neuron navigator 1 0.0231342
PHC2 polyhomeotic homolog 2 (Drosophila) 0.0229918
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0227959
EFR3B EFR3 homolog B (S. cerevisiae) 0.0224189
FNDC3B fibronectin type III domain containing 3B 0.0222701
RFX7 regulatory factor X, 7 0.0218955
MRTFA myocardin related transcription factor A 0.0213013
MIDEAS mitotic deacetylase associated SANT domain protein 0.0212825
KLF10 Kruppel-like factor 10 0.0211971
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0208553
ESYT2 extended synaptotagmin-like protein 2 0.0208444
MTERF1 mitochondrial transcription termination factor 1 0.020771
NFE2L1 nuclear factor, erythroid 2-like 1 0.019976
SSBP3 single stranded DNA binding protein 3 0.0198978
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0196565
AFAP1 actin filament associated protein 1 0.0193284
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0193197
STOM stomatin 0.0192221
SMAD3 SMAD family member 3 0.0191306
IL1RAP interleukin 1 receptor accessory protein 0.0185934
ANK2 ankyrin 2, neuronal 0.0185623
EPHA3 EPH receptor A3 0.0185217
EIF4H eukaryotic translation initiation factor 4H 0.0185079
VGLL4 vestigial-like family member 4 0.018362
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0182367
STARD13 StAR-related lipid transfer (START) domain containing 13 0.0179758
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 0.0177765
PDE4D phosphodiesterase 4D, cAMP-specific 0.0176921
SAMD4A sterile alpha motif domain containing 4A 0.017662
MEF2A myocyte enhancer factor 2A 0.017333
FBXO7 F-box protein 7 0.0169742
METTL15 methyltransferase like 15 0.0169282
ACER3 alkaline ceramidase 3 0.0168973
STAMBPL1 STAM binding protein-like 1 0.0165532
LRMDA leucine rich melanocyte differentiation associated 0.0164792
CHSY1 chondroitin sulfate synthase 1 0.0164264
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0163216
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0162031
MYOF myoferlin 0.0159827
A2M alpha-2-macroglobulin 0.0158872
AGTPBP1 ATP/GTP binding protein 1 0.0158281
NRP2 neuropilin 2 0.0157321
JARID2 jumonji, AT rich interactive domain 2 0.0156516
EFCAB13 EF-hand calcium binding domain 13 0.0155666
CTTNBP2 cortactin binding protein 2 0.0155397
RPS2 ribosomal protein S2 0.0155197
RAD51B RAD51 paralog B 0.0154465
ZMIZ1 zinc finger, MIZ-type containing 1 0.0153968
IFRD1 interferon-related developmental regulator 1 0.015387
RYBP RING1 and YY1 binding protein 0.0153531
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0152628
KDM7A lysine (K)-specific demethylase 7A 0.0148771
GPR137B G protein-coupled receptor 137B 0.0148657
ZNF638 zinc finger protein 638 0.014629
CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3 0.0146258
NRIP1 nuclear receptor interacting protein 1 0.0145709
CLMN calmin (calponin-like, transmembrane) 0.0145581
EYA1 EYA transcriptional coactivator and phosphatase 1 0.0145457

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.231807
VIM vimentin -0.17619
IGFBP5 insulin-like growth factor binding protein 5 -0.152963
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.107744
TMSB10 thymosin beta 10 -0.106858
HLA-B major histocompatibility complex, class I, B -0.105218
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.093586
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0910651
GDF15 growth differentiation factor 15 -0.0868716
VGF VGF nerve growth factor inducible -0.0868628
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0853056
PTMA prothymosin, alpha -0.0806967
ENO1 enolase 1, (alpha) -0.0791099
AKAP12 A kinase (PRKA) anchor protein 12 -0.0736424
IFI16 interferon, gamma-inducible protein 16 -0.0695415
HILPDA hypoxia inducible lipid droplet-associated -0.0684342
S100A6 S100 calcium binding protein A6 -0.06811
CALD1 caldesmon 1 -0.0627391
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.058965
WSB1 WD repeat and SOCS box containing 1 -0.0524164
FMN1 formin 1 -0.0516622
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0501113
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0492266
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0475442
EHBP1 EH domain binding protein 1 -0.0463768
FTL ferritin, light polypeptide -0.0453051
VDAC1 voltage-dependent anion channel 1 -0.0430379
ACTG1 actin gamma 1 -0.0425937
TPI1 triosephosphate isomerase 1 -0.0422953
EGR1 early growth response 1 -0.0422305
DCT dopachrome tautomerase -0.0417083
PTCHD4 patched domain containing 4 -0.0413656
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0393602
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0387693
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.0386961
IER3 immediate early response 3 -0.0380825
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0379417
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0379196
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0378605
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.037741
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0352915
LMNA lamin A/C -0.0351302
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0345808
TPT1 tumor protein, translationally-controlled 1 -0.0343939
NPAS2 neuronal PAS domain protein 2 -0.0337658
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0335075
ENO2 enolase 2 (gamma, neuronal) -0.0332145
KDM3A lysine (K)-specific demethylase 3A -0.0332
S100A9 S100 calcium binding protein A9 -0.0330348
CUX1 cut-like homeobox 1 -0.0330144
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0329169
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0327668
PGK1 phosphoglycerate kinase 1 -0.0321245
HLA-A major histocompatibility complex, class I, A -0.031985
KTN1 kinectin 1 (kinesin receptor) -0.0314558
CANX calnexin -0.0312835
COL19A1 collagen, type XIX, alpha 1 -0.0307823
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0305506
NDRG1 N-myc downstream regulated 1 -0.0304282
PKM pyruvate kinase, muscle -0.0302133
FAM162A family with sequence similarity 162, member A -0.0301882
PTK2 protein tyrosine kinase 2 -0.0301007
HMGA2 high mobility group AT-hook 2 -0.029871
LAMB1 laminin, beta 1 -0.0296114
TAGLN2 transgelin 2 -0.0291054
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0286877
B2M beta-2-microglobulin -0.0286614
RNF145 ring finger protein 145 -0.028427
RPS6 ribosomal protein S6 -0.0280292
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0279739
TMEM123 transmembrane protein 123 -0.0279642
ZC3H7A zinc finger CCCH-type containing 7A -0.0276826
KMT2E lysine (K)-specific methyltransferase 2E -0.0276078
GNAS GNAS complex locus -0.027577
PDIA3 protein disulfide isomerase family A, member 3 -0.0273366
CD63 CD63 molecule -0.0270825
SETD5 SET domain containing 5 -0.0269035
FRMD5 FERM domain containing 5 -0.0267137
TNRC6B trinucleotide repeat containing 6B -0.0266404
HMCN1 hemicentin 1 -0.0266179
POTEF POTE ankyrin domain family, member F -0.0265717
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) -0.0265128
ZMYND8 zinc finger, MYND-type containing 8 -0.0264088
IFITM3 interferon induced transmembrane protein 3 -0.0261527
PDE4B phosphodiesterase 4B, cAMP-specific -0.0261215
KDM5B lysine (K)-specific demethylase 5B -0.0258259
RPLP1 ribosomal protein, large, P1 -0.0257787
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0256716
COL1A2 collagen, type I, alpha 2 -0.0256542
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0249449
MTDH metadherin -0.0248918
KDM2A lysine (K)-specific demethylase 2A -0.0247891
TPM4 tropomyosin 4 -0.0247683
RPS8 ribosomal protein S8 -0.0247095
VCL vinculin -0.024452
ARHGAP5 Rho GTPase activating protein 5 -0.02439
MRPS6 mitochondrial ribosomal protein S6 -0.0243689
MTPN myotrophin -0.0240754
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0239272
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0238468