Pexidartinib (hydrochloride)_H4 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pexidartinib (hydrochloride) perturbation in H4 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pexidartinib (hydrochloride)_H4 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL6A3 collagen, type VI, alpha 3 0.150792
CXCL8 chemokine (C-X-C motif) ligand 8 0.138315
NDRG1 N-myc downstream regulated 1 0.131084
EGFR epidermal growth factor receptor 0.105247
NALF1 NALCN channel auxiliary factor 1 0.0843914
STC1 stanniocalcin 1 0.0686125
LOX lysyl oxidase 0.0639887
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0512624
NFE2L1 nuclear factor, erythroid 2-like 1 0.0510685
EEF2 eukaryotic translation elongation factor 2 0.0482708
BACE2 beta-site APP-cleaving enzyme 2 0.0469326
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0436761
CD44 CD44 molecule (Indian blood group) 0.0428438
MAST4 microtubule associated serine/threonine kinase family member 4 0.0413849
ANTXR2 anthrax toxin receptor 2 0.0413671
RPS2 ribosomal protein S2 0.0408917
ZNF841 zinc finger protein 841 0.0390683
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0388095
ASPH aspartate beta-hydroxylase 0.0382628
SBF2 SET binding factor 2 0.0376236
HDAC9 histone deacetylase 9 0.0371681
FLNA filamin A, alpha 0.0368948
TGFBI transforming growth factor, beta-induced, 68kDa 0.0363521
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0361029
CEMIP cell migration inducing protein, hyaluronan binding 0.0342352
RACK1 receptor for activated C kinase 1 0.034001
MACF1 microtubule-actin crosslinking factor 1 0.0339574
METTL15 methyltransferase like 15 0.033077
AKAP12 A kinase (PRKA) anchor protein 12 0.0327003
FNIP1 folliculin interacting protein 1 0.0326741
IGFBP3 insulin-like growth factor binding protein 3 0.0324341
COL5A1 collagen, type V, alpha 1 0.0323349
SAMD4A sterile alpha motif domain containing 4A 0.0315768
SMAD3 SMAD family member 3 0.0313875
YEATS2 YEATS domain containing 2 0.0313489
DGKD diacylglycerol kinase, delta 130kDa 0.0312855
DOCK5 dedicator of cytokinesis 5 0.0311473
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0310007
MBD5 methyl-CpG binding domain protein 5 0.0304529
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0300472
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0299079
RFX8 RFX family member 8, lacking RFX DNA binding domain 0.0294475
OR51B5 olfactory receptor, family 51, subfamily B, member 5 0.0290189
PYGL phosphorylase, glycogen, liver 0.0288938
ZCCHC7 zinc finger, CCHC domain containing 7 0.0286829
WWTR1 WW domain containing transcription regulator 1 0.0281253
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0271642
COG5 component of oligomeric golgi complex 5 0.0267861
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0266919
LPP LIM domain containing preferred translocation partner in lipoma 0.0266049
PGK1 phosphoglycerate kinase 1 0.0262582
ZBTB20 zinc finger and BTB domain containing 20 0.026123
TTC3 tetratricopeptide repeat domain 3 0.0254014
RASA2 RAS p21 protein activator 2 0.0252984
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0252778
NPC1 Niemann-Pick disease, type C1 0.0248438
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 0.024422
CD59 CD59 molecule, complement regulatory protein 0.0243444
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0237845
CALD1 caldesmon 1 0.0235615
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0234309
MKI67 marker of proliferation Ki-67 0.0227261
ANKRD17 ankyrin repeat domain 17 0.0227203
GRB10 growth factor receptor-bound protein 10 0.0227102
AVL9 AVL9 homolog (S. cerevisiase) 0.0225106
ERRFI1 ERBB receptor feedback inhibitor 1 0.022509
PLAUR plasminogen activator, urokinase receptor 0.0223313
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0223225
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0222826
RPL37A ribosomal protein L37a 0.0221985
PRELID2 PRELI domain containing 2 0.0220945
HSPA8 heat shock 70kDa protein 8 0.0220672
NOTCH2 notch 2 0.0219131
GPATCH2L G patch domain containing 2-like 0.0218067
ARHGAP22 Rho GTPase activating protein 22 0.02156
MYH9 myosin, heavy chain 9, non-muscle 0.0214866
SEC23A Sec23 homolog A (S. cerevisiae) 0.0214138
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0210562
SMYD3 SET and MYND domain containing 3 0.0210204
UMAD1 UBAP1-MVB12-associated (UMA) domain containing 1 0.0209684
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0209252
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.020767
CDK14 cyclin-dependent kinase 14 0.0206914
MBNL1 muscleblind-like splicing regulator 1 0.0206696
LOXL2 lysyl oxidase-like 2 0.0206624
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0206581
WDR26 WD repeat domain 26 0.0206099
USP9Y ubiquitin specific peptidase 9, Y-linked 0.0205484
ANKRD12 ankyrin repeat domain 12 0.0205168
EXT1 exostosin glycosyltransferase 1 0.0204769
JARID2 jumonji, AT rich interactive domain 2 0.0202589
ZEB1 zinc finger E-box binding homeobox 1 0.020135
NAV1 neuron navigator 1 0.0198872
BBS9 Bardet-Biedl syndrome 9 0.0197844
CDK13 cyclin-dependent kinase 13 0.0197789
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.0197228
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.019717
RNF216 ring finger protein 216 0.0196865
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0196426
FLNB filamin B, beta 0.0196272

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.413499
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.192623
FTL ferritin, light polypeptide -0.191919
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.119891
PTMA prothymosin, alpha -0.0920299
HILPDA hypoxia inducible lipid droplet-associated -0.0740267
RPS6 ribosomal protein S6 -0.061249
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0540883
EGR1 early growth response 1 -0.0534423
CANX calnexin -0.0532659
ADM adrenomedullin -0.0477282
POTEF POTE ankyrin domain family, member F -0.0420069
TPT1 tumor protein, translationally-controlled 1 -0.0402861
RLF rearranged L-myc fusion -0.0379299
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0378484
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0373948
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0370035
MAP1B microtubule-associated protein 1B -0.0364365
TRA2A transformer 2 alpha homolog (Drosophila) -0.0362227
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0346023
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0343398
S100A10 S100 calcium binding protein A10 -0.0339109
TPM4 tropomyosin 4 -0.0336711
TPI1 triosephosphate isomerase 1 -0.0331507
UBC ubiquitin C -0.0331007
ANXA2 annexin A2 -0.0329587
TXNRD1 thioredoxin reductase 1 -0.0327843
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0326446
PKM pyruvate kinase, muscle -0.0316973
B2M beta-2-microglobulin -0.0310034
PDIA3 protein disulfide isomerase family A, member 3 -0.0307601
AHNAK AHNAK nucleoprotein -0.030444
YBX1 Y box binding protein 1 -0.0299205
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.029192
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0290924
RPLP2 ribosomal protein, large, P2 -0.0289102
RPS25 ribosomal protein S25 -0.0287912
PDIA4 protein disulfide isomerase family A, member 4 -0.0286783
RPLP0 ribosomal protein, large, P0 -0.0277378
VDAC1 voltage-dependent anion channel 1 -0.0276731
TUBA1B tubulin, alpha 1b -0.0265696
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0265466
USP3 ubiquitin specific peptidase 3 -0.0260415
SETD5 SET domain containing 5 -0.025991
SQSTM1 sequestosome 1 -0.025967
ADAM9 ADAM metallopeptidase domain 9 -0.0257133
H3-3B H3.3 histone B -0.0256514
RPL19 ribosomal protein L19 -0.0254254
IGFBP5 insulin-like growth factor binding protein 5 -0.0252517
RPS23 ribosomal protein S23 -0.0250126
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0249731
RPS11 ribosomal protein S11 -0.0246754
RHEB Ras homolog enriched in brain -0.0245361
RPS13 ribosomal protein S13 -0.024331
GARS1 glycyl-tRNA synthetase 1 -0.02432
TXNIP thioredoxin interacting protein -0.0239493
RAB7A RAB7A, member RAS oncogene family -0.0239154
MSN moesin -0.0237111
JUN jun proto-oncogene -0.0236342
VEGFA vascular endothelial growth factor A -0.0233684
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0233113
RPS8 ribosomal protein S8 -0.0222805
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0222503
RPL28 ribosomal protein L28 -0.0221224
MCL1 myeloid cell leukemia 1 -0.022011
TSC22D2 TSC22 domain family, member 2 -0.0219822
SOD2 superoxide dismutase 2, mitochondrial -0.021946
HLA-A major histocompatibility complex, class I, A -0.0215848
WAC WW domain containing adaptor with coiled-coil -0.0214083
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0213315
BBX bobby sox homolog (Drosophila) -0.021284
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0212488
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0211409
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0211394
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0210501
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0209387
BZW2 basic leucine zipper and W2 domains 2 -0.0208734
RPS24 ribosomal protein S24 -0.0207426
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0203887
QKI QKI, KH domain containing, RNA binding -0.020167
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 -0.020154
ATP5F1B ATP synthase F1 subunit beta -0.020108
GDF15 growth differentiation factor 15 -0.0198881
CCNI cyclin I -0.0198774
TMSB10 thymosin beta 10 -0.0196632
ZNF207 zinc finger protein 207 -0.0196365
KTN1 kinectin 1 (kinesin receptor) -0.0195855
BRD4 bromodomain containing 4 -0.0195363
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.019485
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0194416
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0191956
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0190759
TMED9 transmembrane emp24 protein transport domain containing 9 -0.0190288
CD99 CD99 molecule -0.0190119
SDC4 syndecan 4 -0.0187706
SLC38A2 solute carrier family 38, member 2 -0.0187608
MTDH metadherin -0.0187588
VCL vinculin -0.0186925
CCNL1 cyclin L1 -0.018524
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0183959