Pexidartinib (hydrochloride)_HCT15 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pexidartinib (hydrochloride) perturbation in HCT15 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pexidartinib (hydrochloride)_HCT15 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.178011
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.160561
EEF2 eukaryotic translation elongation factor 2 0.131043
PRELID2 PRELI domain containing 2 0.12617
P4HB prolyl 4-hydroxylase, beta polypeptide 0.12425
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.108695
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0937964
TXNRD1 thioredoxin reductase 1 0.083598
ZNF292 zinc finger protein 292 0.0789887
KDM4C lysine (K)-specific demethylase 4C 0.0759404
LOC112694756 uncharaterized LOC112694756 0.0721078
DSCAM Down syndrome cell adhesion molecule 0.0699156
ANKRD12 ankyrin repeat domain 12 0.0671175
GOLGA4 golgin A4 0.066539
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0655873
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0630317
YEATS2 YEATS domain containing 2 0.0623411
AKAP9 A kinase (PRKA) anchor protein 9 0.0608914
LDHA lactate dehydrogenase A 0.0606586
RAD51B RAD51 paralog B 0.0602177
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0600887
NUP58 nucleoporin 58 0.0600503
MBD5 methyl-CpG binding domain protein 5 0.057069
PCBP2 poly(rC) binding protein 2 0.056812
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0567064
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0557023
RPS2 ribosomal protein S2 0.0555392
TMF1 TATA element modulatory factor 1 0.0539809
TENM3 teneurin transmembrane protein 3 0.053377
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.052277
PGK1 phosphoglycerate kinase 1 0.0522117
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0513361
FTL ferritin, light polypeptide 0.0510412
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0505225
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0486
PNISR PNN-interacting serine/arginine-rich protein 0.0482647
ZNF638 zinc finger protein 638 0.0475524
DDIT4 DNA-damage-inducible transcript 4 0.0470973
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0458679
KIAA1217 KIAA1217 0.0458636
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0456284
NF1 neurofibromin 1 0.0452342
SEC31A SEC31 homolog A (S. cerevisiae) 0.0450385
OGA O-GlcNAcase 0.0440036
NEBL nebulette 0.0433316
KMT2C lysine (K)-specific methyltransferase 2C 0.0427738
ATXN1 ataxin 1 0.042752
CDK19 cyclin-dependent kinase 19 0.0424498
CTNND1 catenin (cadherin-associated protein), delta 1 0.0415518
TBC1D22A TBC1 domain family, member 22A 0.0409645
KIF5B kinesin family member 5B 0.0409052
ARL5B ADP-ribosylation factor-like 5B 0.0386273
SFXN1 sideroflexin 1 0.0384071
ZNF654 zinc finger protein 654 0.038051
TTC3 tetratricopeptide repeat domain 3 0.0376241
MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 0.0373086
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0371341
CSNK1A1 casein kinase 1, alpha 1 0.0369866
RBM39 RNA binding motif protein 39 0.036605
HERC3 HECT and RLD domain containing E3 ubiquitin protein ligase 3 0.0362061
CSDE1 cold shock domain containing E1, RNA-binding 0.0360295
TPR translocated promoter region, nuclear basket protein 0.035721
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0356536
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0354461
COG6 component of oligomeric golgi complex 6 0.0351476
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0351227
KDM2A lysine (K)-specific demethylase 2A 0.0350149
SRP54 signal recognition particle 54kDa 0.0346328
TM9SF3 transmembrane 9 superfamily member 3 0.0344632
RSRC2 arginine/serine-rich coiled-coil 2 0.0341902
BIRC6 baculoviral IAP repeat containing 6 0.0341005
HELZ helicase with zinc finger 0.0339359
MATR3 matrin 3 0.0336859
PCM1 pericentriolar material 1 0.0335425
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0334232
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.0333633
YTHDC1 YTH domain containing 1 0.0330802
MON2 MON2 homolog (S. cerevisiae) 0.0328845
WDPCP WD repeat containing planar cell polarity effector 0.0328128
BBX bobby sox homolog (Drosophila) 0.0325963
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0325953
CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 0.0325934
KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 0.032511
EIF1 eukaryotic translation initiation factor 1 0.0324624
MYO9A myosin IXA 0.0324584
PDIA3 protein disulfide isomerase family A, member 3 0.032186
AFF4 AF4/FMR2 family, member 4 0.032146
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0320398
WWC2 WW and C2 domain containing 2 0.0318939
TMEM41B transmembrane protein 41B 0.0318121
MED13L mediator complex subunit 13-like 0.0317593
ZFAND3 zinc finger, AN1-type domain 3 0.0315813
TMED2 transmembrane emp24 domain trafficking protein 2 0.0315659
WDR26 WD repeat domain 26 0.0311919
SUCO SUN domain containing ossification factor 0.0311149
NDRG1 N-myc downstream regulated 1 0.0310226
LPP LIM domain containing preferred translocation partner in lipoma 0.03102
KTN1 kinectin 1 (kinesin receptor) 0.0310016
RAB6A RAB6A, member RAS oncogene family 0.0307108
NFE2L1 nuclear factor, erythroid 2-like 1 0.03069

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.311146
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.168542
AHNAK AHNAK nucleoprotein -0.154632
TMSB10 thymosin beta 10 -0.110156
TPT1 tumor protein, translationally-controlled 1 -0.106949
RPS6 ribosomal protein S6 -0.0570049
EGR1 early growth response 1 -0.0520093
TUBA1B tubulin, alpha 1b -0.0505171
S100A9 S100 calcium binding protein A9 -0.0430317
RPS24 ribosomal protein S24 -0.0409198
TPM4 tropomyosin 4 -0.040077
ACTG1 actin gamma 1 -0.0367818
HMGA2 high mobility group AT-hook 2 -0.0351828
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0338686
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0322547
SERINC5 serine incorporator 5 -0.0321982
HMGB1 high mobility group box 1 -0.0319595
RPS13 ribosomal protein S13 -0.0314002
H1-0 H1.0 linker histone -0.0304542
RPLP2 ribosomal protein, large, P2 -0.0301581
MT2A metallothionein 2A -0.0297067
RPS15 ribosomal protein S15 -0.029702
PKM pyruvate kinase, muscle -0.0290463
RPS21 ribosomal protein S21 -0.0289809
S100A6 S100 calcium binding protein A6 -0.0285949
DEK DEK proto-oncogene -0.0279676
SDC4 syndecan 4 -0.0272564
RPS25 ribosomal protein S25 -0.0272453
NOP56 NOP56 ribonucleoprotein -0.0261406
KRT18 keratin 18, type I -0.0261028
S100A10 S100 calcium binding protein A10 -0.0257127
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.025665
INTS6 integrator complex subunit 6 -0.0255381
LRRC23 leucine rich repeat containing 23 -0.0253095
AKAP12 A kinase (PRKA) anchor protein 12 -0.0250051
POTEF POTE ankyrin domain family, member F -0.0246056
CCND1 cyclin D1 -0.0242163
RPL38 ribosomal protein L38 -0.023866
IFITM3 interferon induced transmembrane protein 3 -0.0236126
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0232656
CADPS Ca++-dependent secretion activator -0.0228906
RPL19 ribosomal protein L19 -0.022773
PA2G4 proliferation-associated 2G4, 38kDa -0.022591
UBC ubiquitin C -0.0223985
RPL8 ribosomal protein L8 -0.0223543
RPS11 ribosomal protein S11 -0.0219427
RPS27A ribosomal protein S27a -0.0215919
RPS8 ribosomal protein S8 -0.0213492
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0213126
RAN RAN, member RAS oncogene family -0.0210376
IGFBP4 insulin-like growth factor binding protein 4 -0.0207915
MRPS6 mitochondrial ribosomal protein S6 -0.0206962
KPNB1 karyopherin (importin) beta 1 -0.0206842
FUS FUS RNA binding protein -0.0205834
WWOX WW domain containing oxidoreductase -0.0204899
RPL31 ribosomal protein L31 -0.0202448
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0199672
RPL36A ribosomal protein L36a -0.0198409
HLA-A major histocompatibility complex, class I, A -0.0198193
EIF5B eukaryotic translation initiation factor 5B -0.0197786
TGFB1 transforming growth factor, beta 1 -0.019738
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.019645
MCL1 myeloid cell leukemia 1 -0.0189283
RPL7A ribosomal protein L7a -0.0188987
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0186115
GPC5 glypican 5 -0.0183045
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0182952
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0182158
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0181663
RPS10 ribosomal protein S10 -0.0179525
SLC38A2 solute carrier family 38, member 2 -0.0178496
RBMX RNA binding motif protein, X-linked -0.0178251
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0176404
DIAPH2 diaphanous-related formin 2 -0.0175848
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0175706
HELLS helicase, lymphoid-specific -0.0174162
EGFR epidermal growth factor receptor -0.0173556
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0173495
VCL vinculin -0.0173156
RPL35A ribosomal protein L35a -0.0171889
RPL32 ribosomal protein L32 -0.0171688
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough -0.0169929
RPS29 ribosomal protein S29 -0.0169561
MORC4 MORC family CW-type zinc finger 4 -0.0168879
RCC1 regulator of chromosome condensation 1 -0.0168362
VEGFA vascular endothelial growth factor A -0.0165201
BZW2 basic leucine zipper and W2 domains 2 -0.0164524
MIDN midnolin -0.016292
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0161969
AHI1 Abelson helper integration site 1 -0.0161453
FAM107B family with sequence similarity 107, member B -0.0159687
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) -0.0159588
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0158801
ASTN2 astrotactin 2 -0.0158414
CEMIP2 cell migration inducing hyaluronidase 2 -0.0158043
UBB ubiquitin B -0.0157371
NOLC1 nucleolar and coiled-body phosphoprotein 1 -0.0155533
BRI3BP BRI3 binding protein -0.0155201
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0155113
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.015307