Pexidartinib (hydrochloride)_HOP62 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pexidartinib (hydrochloride) perturbation in HOP62 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pexidartinib (hydrochloride)_HOP62 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.133766
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.102963
TRIO trio Rho guanine nucleotide exchange factor 0.0717809
CD44 CD44 molecule (Indian blood group) 0.0634806
COL5A1 collagen, type V, alpha 1 0.0560196
CXCL8 chemokine (C-X-C motif) ligand 8 0.0556487
IGF2 insulin-like growth factor 2 0.0511645
JARID2 jumonji, AT rich interactive domain 2 0.0486375
HMGA2 high mobility group AT-hook 2 0.0467698
LAMB3 laminin, beta 3 0.0462531
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0461155
LOX lysyl oxidase 0.0445534
COL6A3 collagen, type VI, alpha 3 0.0392203
PRELID2 PRELI domain containing 2 0.0389218
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0388876
FLNA filamin A, alpha 0.0383956
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0346391
COL6A2 collagen, type VI, alpha 2 0.0329886
NAV2 neuron navigator 2 0.031787
ERRFI1 ERBB receptor feedback inhibitor 1 0.0311997
EFNA5 ephrin-A5 0.0301039
COL6A1 collagen, type VI, alpha 1 0.0299603
EXT1 exostosin glycosyltransferase 1 0.029887
DTNA dystrobrevin, alpha 0.0293083
BACE2 beta-site APP-cleaving enzyme 2 0.0291395
NAV1 neuron navigator 1 0.0287942
GRB10 growth factor receptor-bound protein 10 0.0285002
ACTG1 actin gamma 1 0.0284424
FLNB filamin B, beta 0.0283645
HPCAL1 hippocalcin-like 1 0.0280171
SEPTIN9 septin 9 0.0273786
EEF2 eukaryotic translation elongation factor 2 0.0264316
RPL37A ribosomal protein L37a 0.0255718
NFE2L1 nuclear factor, erythroid 2-like 1 0.0255193
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0254461
TAS2R14 taste receptor, type 2, member 14 0.0253061
ANKRD12 ankyrin repeat domain 12 0.0249057
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0247277
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0246054
EPN2 epsin 2 0.0245627
RPS12 ribosomal protein S12 0.0243972
YEATS2 YEATS domain containing 2 0.0242415
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.02289
CDH13 cadherin 13 0.0222932
RPS2 ribosomal protein S2 0.022021
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0218728
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0218336
PLEC plectin 0.021654
IGF1R insulin-like growth factor 1 receptor 0.0215401
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0210642
KLF6 Kruppel-like factor 6 0.0204764
MAML3 mastermind-like 3 (Drosophila) 0.0203132
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0202618
PCBP3 poly(rC) binding protein 3 0.0202493
MYO10 myosin X 0.02014
BHLHE40 basic helix-loop-helix family, member e40 0.0199222
LPP LIM domain containing preferred translocation partner in lipoma 0.0196512
NDRG1 N-myc downstream regulated 1 0.0190876
PDE10A phosphodiesterase 10A 0.0188209
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0187996
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0184452
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0181766
SDK1 sidekick cell adhesion molecule 1 0.0178389
RPS3 ribosomal protein S3 0.0177807
RASA3 RAS p21 protein activator 3 0.0176118
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.0171
FNIP1 folliculin interacting protein 1 0.0168658
L1CAM L1 cell adhesion molecule 0.0163567
FMNL2 formin-like 2 0.0158785
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0158294
SAMD4A sterile alpha motif domain containing 4A 0.0157696
RUNX1 runt-related transcription factor 1 0.0155468
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0155299
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0155021
RPL30 ribosomal protein L30 0.0154947
MBD5 methyl-CpG binding domain protein 5 0.0151562
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0150712
ARHGAP22 Rho GTPase activating protein 22 0.0149268
CD59 CD59 molecule, complement regulatory protein 0.0146454
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0145418
FMN1 formin 1 0.0143619
HIPK2 homeodomain interacting protein kinase 2 0.0142723
SMAD3 SMAD family member 3 0.0140658
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0139657
ZMIZ1 zinc finger, MIZ-type containing 1 0.0139083
SBF2 SET binding factor 2 0.0138706
SPRY4 sprouty homolog 4 (Drosophila) 0.0135886
AFF4 AF4/FMR2 family, member 4 0.0135368
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0135167
TNS1 tensin 1 0.0134149
CEP350 centrosomal protein 350kDa 0.0133281
PRKCA protein kinase C, alpha 0.0133262
LOXL2 lysyl oxidase-like 2 0.0132505
MLPH melanophilin 0.0130019
DDIT4 DNA-damage-inducible transcript 4 0.0127925
PTPRM protein tyrosine phosphatase, receptor type, M 0.0127021
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0126785
SMYD3 SET and MYND domain containing 3 0.0124352
GDI2 GDP dissociation inhibitor 2 0.0124207
CLIC1 chloride intracellular channel 1 0.0122873

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.477794
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.156236
PTMA prothymosin, alpha -0.0786022
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0760959
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0701057
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0612806
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0545073
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0542501
EGR1 early growth response 1 -0.0521829
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0498857
PDIA3 protein disulfide isomerase family A, member 3 -0.0460584
RPS6 ribosomal protein S6 -0.0449968
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0417803
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0406574
AHNAK AHNAK nucleoprotein -0.0389054
IER3 immediate early response 3 -0.0365765
MAP1B microtubule-associated protein 1B -0.0364681
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0351029
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0326557
UBC ubiquitin C -0.0300254
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0299716
USP3 ubiquitin specific peptidase 3 -0.0297264
SETD5 SET domain containing 5 -0.0293612
FTL ferritin, light polypeptide -0.0293003
ASPH aspartate beta-hydroxylase -0.0289315
FN1 fibronectin 1 -0.0288423
CANX calnexin -0.0287083
S100A10 S100 calcium binding protein A10 -0.0283741
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0276198
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0262938
TPT1 tumor protein, translationally-controlled 1 -0.0252654
SYAP1 synapse associated protein 1 -0.0245301
CLIC4 chloride intracellular channel 4 -0.0237786
RAB1A RAB1A, member RAS oncogene family -0.0236102
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0235183
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0230048
HILPDA hypoxia inducible lipid droplet-associated -0.0226128
TXNRD1 thioredoxin reductase 1 -0.0225329
RLF rearranged L-myc fusion -0.022377
VDAC1 voltage-dependent anion channel 1 -0.0223403
MT2A metallothionein 2A -0.0220998
PDIA4 protein disulfide isomerase family A, member 4 -0.0219704
PDIA6 protein disulfide isomerase family A, member 6 -0.0216434
DST dystonin -0.0215956
YBX1 Y box binding protein 1 -0.0214783
BTG1 B-cell translocation gene 1, anti-proliferative -0.0209391
CENPF centromere protein F, 350/400kDa -0.0206867
ELL2 elongation factor, RNA polymerase II, 2 -0.0201369
ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 -0.0200386
MCL1 myeloid cell leukemia 1 -0.0196895
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.019668
TFRC transferrin receptor -0.0196296
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0195292
RPL8 ribosomal protein L8 -0.019446
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0190895
TPI1 triosephosphate isomerase 1 -0.0187352
ASTN2 astrotactin 2 -0.0186842
KPNB1 karyopherin (importin) beta 1 -0.0184605
G0S2 G0/G1 switch 2 -0.0184277
RTN4 reticulon 4 -0.0181521
PKM pyruvate kinase, muscle -0.0179574
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0179223
TXNIP thioredoxin interacting protein -0.0177965
RYBP RING1 and YY1 binding protein -0.0176824
QKI QKI, KH domain containing, RNA binding -0.0175461
RPLP0 ribosomal protein, large, P0 -0.0174422
ADM adrenomedullin -0.0172648
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0169842
CCNI cyclin I -0.0169347
DEK DEK proto-oncogene -0.0165294
COL1A1 collagen, type I, alpha 1 -0.0162741
JUN jun proto-oncogene -0.0161922
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.016106
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0160054
TPM4 tropomyosin 4 -0.0159623
NAMPT nicotinamide phosphoribosyltransferase -0.0159417
WSB1 WD repeat and SOCS box containing 1 -0.0157374
ADAM9 ADAM metallopeptidase domain 9 -0.0156522
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0152005
UGCG UDP-glucose ceramide glucosyltransferase -0.0151871
CDCP1 CUB domain containing protein 1 -0.0150971
STC1 stanniocalcin 1 -0.015075
FAM162A family with sequence similarity 162, member A -0.0150256
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0146127
POTEF POTE ankyrin domain family, member F -0.0145839
RBM39 RNA binding motif protein 39 -0.0145781
CCND1 cyclin D1 -0.0145559
LMNA lamin A/C -0.0145146
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0144133
GOLGB1 golgin B1 -0.0143992
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0143695
B2M beta-2-microglobulin -0.014266
KIF14 kinesin family member 14 -0.0142186
MT1X metallothionein 1X -0.0142002
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0139732
TUBA1B tubulin, alpha 1b -0.0136817
H3-3B H3.3 histone B -0.0135368
ACBD3 acyl-CoA binding domain containing 3 -0.013358
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa -0.0133572
XPO1 exportin 1 -0.0132236