Pexidartinib (hydrochloride)_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pexidartinib (hydrochloride) perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pexidartinib (hydrochloride)_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 0.298623
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.241654
CXCL8 chemokine (C-X-C motif) ligand 8 0.15069
COL6A3 collagen, type VI, alpha 3 0.128791
NDRG1 N-myc downstream regulated 1 0.122224
VIM vimentin 0.111376
LOX lysyl oxidase 0.0881946
EEF2 eukaryotic translation elongation factor 2 0.0778182
CD44 CD44 molecule (Indian blood group) 0.0596519
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0593156
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0586355
TIMP3 TIMP metallopeptidase inhibitor 3 0.0562918
LOXL2 lysyl oxidase-like 2 0.0535792
MT2A metallothionein 2A 0.0506121
JARID2 jumonji, AT rich interactive domain 2 0.0465769
PRELID2 PRELI domain containing 2 0.0448892
VCAN versican 0.0427268
F3 coagulation factor III (thromboplastin, tissue factor) 0.0423639
ACTG1 actin gamma 1 0.041301
FLNA filamin A, alpha 0.0391921
ATP13A3 ATPase type 13A3 0.0382434
EGFR epidermal growth factor receptor 0.0381128
STC1 stanniocalcin 1 0.0378622
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0375556
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.036945
RPS12 ribosomal protein S12 0.0366299
PDE10A phosphodiesterase 10A 0.0365152
CALR calreticulin 0.0364234
CYB5R3 cytochrome b5 reductase 3 0.035991
TGFBI transforming growth factor, beta-induced, 68kDa 0.0339177
NAV1 neuron navigator 1 0.0325827
NFE2L1 nuclear factor, erythroid 2-like 1 0.0321891
FTH1 ferritin, heavy polypeptide 1 0.031832
TMSB10 thymosin beta 10 0.0314075
COL5A1 collagen, type V, alpha 1 0.0310335
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0298969
MRPS6 mitochondrial ribosomal protein S6 0.0283647
AXL AXL receptor tyrosine kinase 0.0280867
RPS2 ribosomal protein S2 0.0276891
RACK1 receptor for activated C kinase 1 0.027674
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0270865
KLF6 Kruppel-like factor 6 0.0269334
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0253904
RPL35A ribosomal protein L35a 0.0243484
RAB2A RAB2A, member RAS oncogene family 0.0241053
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0237081
STC2 stanniocalcin 2 0.0236636
NALF1 NALCN channel auxiliary factor 1 0.0233971
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0233819
NAV2 neuron navigator 2 0.0229852
PFN1 profilin 1 0.0225645
VEGFA vascular endothelial growth factor A 0.0224699
CDH13 cadherin 13 0.0219642
KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 0.0219221
HMGA1 high mobility group AT-hook 1 0.0218145
CMIP c-Maf inducing protein 0.0209781
PSD3 pleckstrin and Sec7 domain containing 3 0.0209045
ATXN1 ataxin 1 0.0201512
RPS3 ribosomal protein S3 0.0201507
ZBTB20 zinc finger and BTB domain containing 20 0.0200698
UBA6 ubiquitin-like modifier activating enzyme 6 0.0200639
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0200483
RPL37A ribosomal protein L37a 0.0192156
CDC27 cell division cycle 27 0.0191919
RASA2 RAS p21 protein activator 2 0.0187712
LPP LIM domain containing preferred translocation partner in lipoma 0.0187249
EPHB1 EPH receptor B1 0.0186982
DPYSL2 dihydropyrimidinase-like 2 0.0186624
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 0.0185937
PGM3 phosphoglucomutase 3 0.0185745
RPS17 ribosomal protein S17 0.0181146
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0180001
RPS19 ribosomal protein S19 0.0179271
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0179225
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0179167
MKI67 marker of proliferation Ki-67 0.0178868
DDIT4 DNA-damage-inducible transcript 4 0.0176488
FAT1 FAT atypical cadherin 1 0.0175794
ANKRD12 ankyrin repeat domain 12 0.0174903
IFI6 interferon, alpha-inducible protein 6 0.0174323
ANKH ANKH inorganic pyrophosphate transport regulator 0.0171941
CLMP CXADR-like membrane protein 0.0168744
ARRDC3 arrestin domain containing 3 0.0168741
FLNC filamin C, gamma 0.0165543
EGR1 early growth response 1 0.0163669
PTPRF protein tyrosine phosphatase, receptor type, F 0.0162433
AMPD3 adenosine monophosphate deaminase 3 0.0162166
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0160595
BHLHE40 basic helix-loop-helix family, member e40 0.0159946
FOSL1 FOS-like antigen 1 0.0159392
AKAP9 A kinase (PRKA) anchor protein 9 0.0158303
ANGPTL4 angiopoietin-like 4 0.0156962
MTSS1 metastasis suppressor 1 0.015683
KAZN kazrin, periplakin interacting protein 0.0155967
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0155167
PLP2 proteolipid protein 2 (colonic epithelium-enriched) 0.0154853
KLF10 Kruppel-like factor 10 0.0154246
RPL23 ribosomal protein L23 0.0153768
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0153292
NUCB2 nucleobindin 2 0.0153291

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.44115
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.253831
COL1A1 collagen, type I, alpha 1 -0.197012
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.124107
FN1 fibronectin 1 -0.0854482
AHNAK AHNAK nucleoprotein -0.0760764
PTMA prothymosin, alpha -0.0731965
CANX calnexin -0.0727909
IER3 immediate early response 3 -0.0612186
SOD2 superoxide dismutase 2, mitochondrial -0.0500557
RPS6 ribosomal protein S6 -0.0476841
IL6ST interleukin 6 signal transducer -0.0457127
UBC ubiquitin C -0.0434726
NAMPT nicotinamide phosphoribosyltransferase -0.0404184
TM4SF1 transmembrane 4 L six family member 1 -0.0382614
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0380221
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0367518
HDLBP high density lipoprotein binding protein -0.0362828
H1-0 H1.0 linker histone -0.0357
ASPH aspartate beta-hydroxylase -0.0350345
RPL8 ribosomal protein L8 -0.0349965
TPT1 tumor protein, translationally-controlled 1 -0.0339408
RLF rearranged L-myc fusion -0.0332112
KDM3A lysine (K)-specific demethylase 3A -0.032488
COL1A2 collagen, type I, alpha 2 -0.0322306
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0318055
S100A10 S100 calcium binding protein A10 -0.0312691
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.030753
MAP4 microtubule-associated protein 4 -0.0293073
RHEB Ras homolog enriched in brain -0.0280877
WSB1 WD repeat and SOCS box containing 1 -0.0280756
ZFAND3 zinc finger, AN1-type domain 3 -0.0275746
TNIP1 TNFAIP3 interacting protein 1 -0.0268807
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0266366
ANXA2 annexin A2 -0.0265202
RBM39 RNA binding motif protein 39 -0.0264839
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0262652
OGA O-GlcNAcase -0.026048
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0256881
THY1 Thy-1 cell surface antigen -0.0251788
SDC4 syndecan 4 -0.02495
RRBP1 ribosome binding protein 1 -0.0248792
RPS24 ribosomal protein S24 -0.0248594
QKI QKI, KH domain containing, RNA binding -0.024204
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0241869
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0240221
RAB1A RAB1A, member RAS oncogene family -0.0239876
FNDC3B fibronectin type III domain containing 3B -0.0237808
DSTN destrin (actin depolymerizing factor) -0.0235085
RYBP RING1 and YY1 binding protein -0.023189
CAVIN1 caveolae associated protein 1 -0.022931
MT1X metallothionein 1X -0.0228102
PDIA4 protein disulfide isomerase family A, member 4 -0.0223495
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0222374
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0215571
TMSB4X thymosin beta 4, X-linked -0.0212253
S100A9 S100 calcium binding protein A9 -0.0209714
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0204295
SP100 SP100 nuclear antigen -0.0203909
USP3 ubiquitin specific peptidase 3 -0.0202162
RPL19 ribosomal protein L19 -0.0202044
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0201439
COL3A1 collagen, type III, alpha 1 -0.0198093
IRF1 interferon regulatory factor 1 -0.0195032
RPS15 ribosomal protein S15 -0.019032
FSTL1 follistatin-like 1 -0.0186836
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0186795
RPL14 ribosomal protein L14 -0.0186262
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0182475
PTK2 protein tyrosine kinase 2 -0.0178542
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0178239
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0176075
NAP1L1 nucleosome assembly protein 1-like 1 -0.0175079
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0174049
BZW1 basic leucine zipper and W2 domains 1 -0.0173313
RPS21 ribosomal protein S21 -0.0172237
GLG1 golgi glycoprotein 1 -0.0171482
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.016856
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0167881
PDE4D phosphodiesterase 4D, cAMP-specific -0.0166541
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme -0.0166108
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0166042
RPS23 ribosomal protein S23 -0.0164908
NPEPPS aminopeptidase puromycin sensitive -0.016343
WASF2 WAS protein family, member 2 -0.0163132
DEK DEK proto-oncogene -0.0161756
RPS11 ribosomal protein S11 -0.0159658
TMEM263 transmembrane protein 263 -0.0159354
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0158632
RHOA ras homolog family member A -0.0157967
IER3IP1 immediate early response 3 interacting protein 1 -0.0157913
RPL32 ribosomal protein L32 -0.0157524
COL4A1 collagen, type IV, alpha 1 -0.0156354
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.0156323
MX2 MX dynamin-like GTPase 2 -0.0156164
HMGB1 high mobility group box 1 -0.015591
RAD21 RAD21 homolog (S. pombe) -0.0155657
ATP5F1B ATP synthase F1 subunit beta -0.0154775
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0154773
GNG12 guanine nucleotide binding protein (G protein), gamma 12 -0.0154153