Pexidartinib (hydrochloride)_HT-29 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pexidartinib (hydrochloride) perturbation in HT-29 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pexidartinib (hydrochloride)_HT-29 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NDRG1 N-myc downstream regulated 1 0.186686
TXNRD1 thioredoxin reductase 1 0.105486
FTH1 ferritin, heavy polypeptide 1 0.0831065
ATXN1 ataxin 1 0.0814072
GCLC glutamate-cysteine ligase, catalytic subunit 0.0736407
NAMPT nicotinamide phosphoribosyltransferase 0.0699172
RPS12 ribosomal protein S12 0.0697677
PLAUR plasminogen activator, urokinase receptor 0.0681249
RPS2 ribosomal protein S2 0.0667871
EIF3H eukaryotic translation initiation factor 3, subunit H 0.0556568
EEF2 eukaryotic translation elongation factor 2 0.0553998
FRY furry homolog (Drosophila) 0.0537566
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) 0.0522377
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0515275
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0484797
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.044254
PRELID2 PRELI domain containing 2 0.0431884
MUC5AC mucin 5AC, oligomeric mucus/gel-forming 0.0428445
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0426075
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0421352
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0420548
STK24 serine/threonine kinase 24 0.0415356
PDZD8 PDZ domain containing 8 0.0413686
RBM47 RNA binding motif protein 47 0.0393621
ERBIN erbb2 interacting protein 0.0379229
CRKL v-crk avian sarcoma virus CT10 oncogene homolog-like 0.037802
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 0.0374695
LPIN2 lipin 2 0.0372627
ANKRD12 ankyrin repeat domain 12 0.0365681
RIGI RNA sensor RIG-I 0.0365493
CCSER1 coiled-coil serine-rich protein 1 0.0364364
ST14 suppression of tumorigenicity 14 (colon carcinoma) 0.0363967
PTPRH protein tyrosine phosphatase, receptor type, H 0.0363468
TMEM45B transmembrane protein 45B 0.0359641
ERRFI1 ERBB receptor feedback inhibitor 1 0.0354094
UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6 0.0352819
ITPKC inositol-trisphosphate 3-kinase C 0.0341853
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0335016
NUP58 nucleoporin 58 0.0333099
NFE2L1 nuclear factor, erythroid 2-like 1 0.0332957
LAMB3 laminin, beta 3 0.0327924
NEK7 NIMA-related kinase 7 0.0312655
NCKAP1 NCK-associated protein 1 0.0311753
MKI67 marker of proliferation Ki-67 0.0309418
RPS3 ribosomal protein S3 0.0301518
FOXO1 forkhead box O1 0.030039
ZMYM2 zinc finger, MYM-type 2 0.0299517
S100P S100 calcium binding protein P 0.0298041
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0292907
RPS17 ribosomal protein S17 0.0291537
RPL4 ribosomal protein L4 0.0282685
ANXA3 annexin A3 0.0273127
PRKN parkin RBR E3 ubiquitin protein ligase 0.0272789
CAPRIN1 cell cycle associated protein 1 0.0266083
LDHA lactate dehydrogenase A 0.0264122
RPL37A ribosomal protein L37a 0.0262449
KIF5B kinesin family member 5B 0.0260989
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0257659
JMJD1C jumonji domain containing 1C 0.0256161
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0252107
TRIB3 tribbles pseudokinase 3 0.0251035
HKDC1 hexokinase domain containing 1 0.0250443
TMEM41B transmembrane protein 41B 0.0247237
RACK1 receptor for activated C kinase 1 0.0238137
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0237772
KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 0.023696
SPRED2 sprouty-related, EVH1 domain containing 2 0.0236401
JUP junction plakoglobin 0.0235068
ARGLU1 arginine and glutamate rich 1 0.0234473
TMED2 transmembrane emp24 domain trafficking protein 2 0.0233645
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0231854
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0231707
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.023167
HOXB6 homeobox B6 0.0230864
SCNN1A sodium channel, non voltage gated 1 alpha subunit 0.02308
TAS2R14 taste receptor, type 2, member 14 0.0230198
BTBD9 BTB (POZ) domain containing 9 0.0229977
KDM6A lysine (K)-specific demethylase 6A 0.0227535
MYO6 myosin VI 0.0227421
ADAM17 ADAM metallopeptidase domain 17 0.0226874
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0224694
ESRP1 epithelial splicing regulatory protein 1 0.0223991
HYOU1 hypoxia up-regulated 1 0.0223495
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 0.0222352
CLDN4 claudin 4 0.0220739
RPL13A ribosomal protein L13a 0.0219754
RTN4 reticulon 4 0.021856
LRATD2 LRAT domain containing 2 0.0216657
ADIPOR2 adiponectin receptor 2 0.0214159
AKAP13 A kinase (PRKA) anchor protein 13 0.0213038
EHF ets homologous factor 0.0212308
TRIB1 tribbles pseudokinase 1 0.0209099
ARHGAP32 Rho GTPase activating protein 32 0.0208126
EFR3A EFR3 homolog A (S. cerevisiae) 0.0206694
BCL3 B-cell CLL/lymphoma 3 0.0206312
KCNK1 potassium channel, two pore domain subfamily K, member 1 0.0206168
TRPS1 trichorhinophalangeal syndrome I 0.0204486
ARL5B ADP-ribosylation factor-like 5B 0.0204259
PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 0.020103
WDFY3 WD repeat and FYVE domain containing 3 0.0200746

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.22312
AHNAK AHNAK nucleoprotein -0.171141
PTMA prothymosin, alpha -0.14798
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.127097
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.112682
RPS6 ribosomal protein S6 -0.101422
TPT1 tumor protein, translationally-controlled 1 -0.100964
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.089812
S100A10 S100 calcium binding protein A10 -0.0733067
MYH14 myosin, heavy chain 14, non-muscle -0.0721591
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0720328
UBC ubiquitin C -0.0714104
KRT8 keratin 8, type II -0.0677883
INTS6 integrator complex subunit 6 -0.0653649
RPS24 ribosomal protein S24 -0.0581554
RPS11 ribosomal protein S11 -0.057958
KRT18 keratin 18, type I -0.0544736
PKM pyruvate kinase, muscle -0.0536588
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0534321
RPLP2 ribosomal protein, large, P2 -0.0527273
RPL21 ribosomal protein L21 -0.0521366
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0512059
CANX calnexin -0.0507668
RPL8 ribosomal protein L8 -0.0502868
RPS21 ribosomal protein S21 -0.048902
PDIA4 protein disulfide isomerase family A, member 4 -0.0468111
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0463119
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0460127
EZR ezrin -0.0449701
HMGB1 high mobility group box 1 -0.0436724
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0433312
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0429631
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0425349
PERP PERP, TP53 apoptosis effector -0.0422688
DEK DEK proto-oncogene -0.0419074
TMSB10 thymosin beta 10 -0.0410712
LYZ lysozyme -0.0404443
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0401494
MCL1 myeloid cell leukemia 1 -0.0398198
RPS27A ribosomal protein S27a -0.0397704
RPLP0 ribosomal protein, large, P0 -0.0397286
PDIA3 protein disulfide isomerase family A, member 3 -0.039579
RHEB Ras homolog enriched in brain -0.0395688
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0395246
JUN jun proto-oncogene -0.0385557
DIAPH2 diaphanous-related formin 2 -0.0383803
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0380685
AGR2 anterior gradient 2 -0.0379257
ADARB1 adenosine deaminase, RNA-specific, B1 -0.0376982
RPL28 ribosomal protein L28 -0.0376108
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0376062
RPS5 ribosomal protein S5 -0.0373295
POTEF POTE ankyrin domain family, member F -0.0363974
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0361753
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0359348
LAMA4 laminin, alpha 4 -0.0356529
ATAD2 ATPase family, AAA domain containing 2 -0.0345821
RPS13 ribosomal protein S13 -0.0340981
FUS FUS RNA binding protein -0.0337944
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0334188
CCNI cyclin I -0.0332798
KRT19 keratin 19, type I -0.0331137
ASPH aspartate beta-hydroxylase -0.0330519
ASTN2 astrotactin 2 -0.0328563
RPS23 ribosomal protein S23 -0.0328539
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0322402
CTTN cortactin -0.0321946
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0317973
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0317081
LOC102724023 ES1 protein homolog, mitochondrial -0.0316921
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.031184
HDLBP high density lipoprotein binding protein -0.0310141
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0309709
SPTAN1 spectrin, alpha, non-erythrocytic 1 -0.0300707
RPL19 ribosomal protein L19 -0.0298158
POF1B premature ovarian failure, 1B -0.0296898
NBEAL1 neurobeachin-like 1 -0.0296658
TPI1 triosephosphate isomerase 1 -0.0296204
MYO10 myosin X -0.0294575
VCL vinculin -0.0294028
TRAPPC9 trafficking protein particle complex 9 -0.0293417
GMDS GDP-mannose 4,6-dehydratase -0.0293374
PARD3 par-3 family cell polarity regulator -0.0293243
VIM vimentin -0.0291752
EGR1 early growth response 1 -0.0288106
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0284081
WASF2 WAS protein family, member 2 -0.0283638
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0276468
CTBP2 C-terminal binding protein 2 -0.0274702
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0274589
RPS15 ribosomal protein S15 -0.0273991
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0273705
H1-0 H1.0 linker histone -0.0270151
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase -0.0269562
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.026936
GOLGB1 golgin B1 -0.0268609
DSTN destrin (actin depolymerizing factor) -0.0267823
PCBP2 poly(rC) binding protein 2 -0.026723
MYADM myeloid-associated differentiation marker -0.0266048
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0265606