Pexidartinib (hydrochloride)_J82 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pexidartinib (hydrochloride) perturbation in J82 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pexidartinib (hydrochloride)_J82 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.207273
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.178724
FTL ferritin, light polypeptide 0.116866
FTH1 ferritin, heavy polypeptide 1 0.107556
NDRG1 N-myc downstream regulated 1 0.0899573
SET SET nuclear proto-oncogene 0.0840821
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0831353
TRIO trio Rho guanine nucleotide exchange factor 0.0808983
HLA-B major histocompatibility complex, class I, B 0.0761166
SLC12A8 solute carrier family 12, member 8 0.0723224
LDHA lactate dehydrogenase A 0.0684572
FLNA filamin A, alpha 0.0659347
B2M beta-2-microglobulin 0.0628998
F3 coagulation factor III (thromboplastin, tissue factor) 0.0602782
ENO1 enolase 1, (alpha) 0.0592827
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0589402
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0575756
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0562499
PKM pyruvate kinase, muscle 0.0530894
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0525284
CD44 CD44 molecule (Indian blood group) 0.0518294
HEG1 heart development protein with EGF-like domains 1 0.0512055
FLNB filamin B, beta 0.0477923
CALR calreticulin 0.0476615
FOSL1 FOS-like antigen 1 0.0444634
TXNRD1 thioredoxin reductase 1 0.0436808
SULF1 sulfatase 1 0.0425874
FNDC3B fibronectin type III domain containing 3B 0.0418235
ZNF841 zinc finger protein 841 0.0416313
PDIA3 protein disulfide isomerase family A, member 3 0.0415051
L1CAM L1 cell adhesion molecule 0.0404955
PODXL podocalyxin-like 0.0402656
DST dystonin 0.0399149
STC2 stanniocalcin 2 0.038979
EEF2 eukaryotic translation elongation factor 2 0.0383669
KTN1 kinectin 1 (kinesin receptor) 0.0375714
HLA-A major histocompatibility complex, class I, A 0.0375579
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0366354
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0355454
PDE10A phosphodiesterase 10A 0.0354315
UGCG UDP-glucose ceramide glucosyltransferase 0.0353543
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0340693
NAV2 neuron navigator 2 0.0332101
AFAP1 actin filament associated protein 1 0.033024
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0326556
UBA6 ubiquitin-like modifier activating enzyme 6 0.0321661
PLIN2 perilipin 2 0.0320662
MYH9 myosin, heavy chain 9, non-muscle 0.0319909
POTEF POTE ankyrin domain family, member F 0.0318132
CENPF centromere protein F, 350/400kDa 0.0314289
ADM adrenomedullin 0.0311924
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0305937
ACTG1 actin gamma 1 0.0300366
TENM3 teneurin transmembrane protein 3 0.029788
PLK2 polo-like kinase 2 0.0297526
MKI67 marker of proliferation Ki-67 0.0294968
SPTBN1 spectrin, beta, non-erythrocytic 1 0.029331
PGK1 phosphoglycerate kinase 1 0.0281221
RPS2 ribosomal protein S2 0.0277932
MYOF myoferlin 0.0272957
MSN moesin 0.026969
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0269286
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0269091
KIF5B kinesin family member 5B 0.0267895
NFE2L1 nuclear factor, erythroid 2-like 1 0.0267878
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0267821
PCBP2 poly(rC) binding protein 2 0.0262099
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0258342
RACK1 receptor for activated C kinase 1 0.0258251
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0257638
NUP58 nucleoporin 58 0.0257596
RPS3 ribosomal protein S3 0.0255441
ZEB2 zinc finger E-box binding homeobox 2 0.025485
GATA2 GATA binding protein 2 0.0253136
COL5A1 collagen, type V, alpha 1 0.0252049
PEA15 phosphoprotein enriched in astrocytes 15 0.0247619
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0245031
SQSTM1 sequestosome 1 0.0238517
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0237683
PTPRM protein tyrosine phosphatase, receptor type, M 0.0235887
KMT2E lysine (K)-specific methyltransferase 2E 0.0235581
RNF213 ring finger protein 213 0.023495
RPL35A ribosomal protein L35a 0.0234779
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 0.0233398
HPS3 Hermansky-Pudlak syndrome 3 0.0232703
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0230093
KRT8 keratin 8, type II 0.0229978
NCOR2 nuclear receptor corepressor 2 0.0229348
KLF10 Kruppel-like factor 10 0.0228383
ANXA1 annexin A1 0.0227444
RPS8 ribosomal protein S8 0.0226865
EGFR epidermal growth factor receptor 0.0226644
ATXN1 ataxin 1 0.0226041
IFI6 interferon, alpha-inducible protein 6 0.0224688
TPR translocated promoter region, nuclear basket protein 0.0224687
YEATS2 YEATS domain containing 2 0.0224221
APLP2 amyloid beta (A4) precursor-like protein 2 0.0224139
KRT7 keratin 7, type II 0.0220805
TPM3 tropomyosin 3 0.0219756
LOXL2 lysyl oxidase-like 2 0.0218414

decreased expression

Symbol Name Standardized Value
AHNAK AHNAK nucleoprotein -0.0767782
EXT1 exostosin glycosyltransferase 1 -0.0685223
MT1X metallothionein 1X -0.0664807
FN1 fibronectin 1 -0.0601698
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0562774
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0544207
ABI3BP ABI family, member 3 (NESH) binding protein -0.0472995
AKAP12 A kinase (PRKA) anchor protein 12 -0.0471643
GLIS3 GLIS family zinc finger 3 -0.0400407
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.03831
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0271017
STAU1 staufen double-stranded RNA binding protein 1 -0.0270466
SLIT2 slit homolog 2 (Drosophila) -0.0266126
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.025856
IGFBP3 insulin-like growth factor binding protein 3 -0.0249708
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0226468
TMSB10 thymosin beta 10 -0.0223157
GOLGA3 golgin A3 -0.0208646
SMC5 structural maintenance of chromosomes 5 -0.0208575
LARP4B La ribonucleoprotein domain family, member 4B -0.0202863
SOD2 superoxide dismutase 2, mitochondrial -0.0195035
SDC4 syndecan 4 -0.0188981
RAB7A RAB7A, member RAS oncogene family -0.0185962
SENP5 SUMO1/sentrin specific peptidase 5 -0.0179221
IARS1 isoleucyl-tRNA synthetase 1 -0.0178798
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0176938
PHACTR1 phosphatase and actin regulator 1 -0.0175766
PTPRF protein tyrosine phosphatase, receptor type, F -0.0170852
ZXDC ZXD family zinc finger C -0.017031
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 -0.0166724
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0166094
ADNP activity-dependent neuroprotector homeobox -0.0165662
RHOA ras homolog family member A -0.0164066
CTTN cortactin -0.0163553
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0161888
VPS53 vacuolar protein sorting 53 homolog (S. cerevisiae) -0.0158947
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0158929
TAOK3 TAO kinase 3 -0.0158856
WNT5B wingless-type MMTV integration site family, member 5B -0.0158377
MAPK8 mitogen-activated protein kinase 8 -0.0158223
RALY RALY heterogeneous nuclear ribonucleoprotein -0.015475
COPA coatomer protein complex, subunit alpha -0.0154403
CELF1 CUGBP, Elav-like family member 1 -0.015414
CDK13 cyclin-dependent kinase 13 -0.0153684
NSD2 nuclear receptor binding SET domain protein 2 -0.0151718
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0151703
ZNF804A zinc finger protein 804A -0.0150663
SETD5 SET domain containing 5 -0.0150276
GOSR1 golgi SNAP receptor complex member 1 -0.0149371
NALF1 NALCN channel auxiliary factor 1 -0.0149212
ERBIN erbb2 interacting protein -0.0148316
CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa -0.0147903
ANKRD28 ankyrin repeat domain 28 -0.0147422
CALD1 caldesmon 1 -0.0146631
ATG7 autophagy related 7 -0.0146224
MARCHF6 membrane associated ring-CH-type finger 6 -0.0144634
GCC2 GRIP and coiled-coil domain containing 2 -0.0144072
HLA-C major histocompatibility complex, class I, C -0.0142697
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0142681
FUBP3 far upstream element (FUSE) binding protein 3 -0.0142458
TAOK1 TAO kinase 1 -0.0138859
ANKLE2 ankyrin repeat and LEM domain containing 2 -0.0138664
CUL4A cullin 4A -0.0138001
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0137169
ZNFX1 zinc finger, NFX1-type containing 1 -0.0136244
CCDC80 coiled-coil domain containing 80 -0.0134737
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0134209
C6ORF62 chromosome 6 open reading frame 62 -0.0133348
GLG1 golgi glycoprotein 1 -0.0133032
SH3RF1 SH3 domain containing ring finger 1 -0.0131537
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0131066
RANBP17 RAN binding protein 17 -0.0130173
MGLL monoglyceride lipase -0.0129494
SCFD2 sec1 family domain containing 2 -0.0129441
TOP1 topoisomerase (DNA) I -0.012863
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0128472
COG5 component of oligomeric golgi complex 5 -0.0128063
THSD4 thrombospondin, type I, domain containing 4 -0.0127703
SLC30A7 solute carrier family 30 (zinc transporter), member 7 -0.0127552
PRRC2B proline-rich coiled-coil 2B -0.0126449
DEK DEK proto-oncogene -0.0126297
CLINT1 clathrin interactor 1 -0.0126186
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 -0.0125475
NLK nemo-like kinase -0.0125264
RBM6 RNA binding motif protein 6 -0.0124844
TSC22D2 TSC22 domain family, member 2 -0.01239
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0123392
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0123075
CDK12 cyclin-dependent kinase 12 -0.0122957
PSMB7 proteasome (prosome, macropain) subunit, beta type, 7 -0.0121712
TMEM165 transmembrane protein 165 -0.0120692
TMEM263 transmembrane protein 263 -0.0120551
UBE2V1 ubiquitin-conjugating enzyme E2 variant 1 -0.0120531
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease -0.0120507
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.012011
MB21D2 Mab-21 domain containing 2 -0.0120066
MON2 MON2 homolog (S. cerevisiae) -0.0119158
BICD1 bicaudal D homolog 1 (Drosophila) -0.0118922
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0118543
SRSF6 serine/arginine-rich splicing factor 6 -0.0117597