Pexidartinib (hydrochloride)_LOX-IMVI Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pexidartinib (hydrochloride) perturbation in LOX-IMVI cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pexidartinib (hydrochloride)_LOX-IMVI drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DTNA dystrobrevin, alpha 0.122486
CD109 CD109 molecule 0.0748323
EEF2 eukaryotic translation elongation factor 2 0.0669234
NDRG1 N-myc downstream regulated 1 0.0587045
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0572096
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0554072
GPC6 glypican 6 0.0520991
EFNA5 ephrin-A5 0.0456068
NUP58 nucleoporin 58 0.0410549
PBX3 pre-B-cell leukemia homeobox 3 0.0381823
FLNA filamin A, alpha 0.0380275
ELL2 elongation factor, RNA polymerase II, 2 0.0368654
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0362251
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0323954
NALF1 NALCN channel auxiliary factor 1 0.0314573
SPAG9 sperm associated antigen 9 0.0304583
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0290795
ZNF292 zinc finger protein 292 0.0290063
UBA6 ubiquitin-like modifier activating enzyme 6 0.028541
FNDC3B fibronectin type III domain containing 3B 0.0284429
MALT1 MALT1 paracaspase 0.026757
PCBP2 poly(rC) binding protein 2 0.024508
RPS2 ribosomal protein S2 0.0243569
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0242114
KLF6 Kruppel-like factor 6 0.0239879
ATP13A3 ATPase type 13A3 0.0235527
MSN moesin 0.0229972
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0227136
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0226356
HOOK2 hook microtubule-tethering protein 2 0.0226272
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0220321
SPRED1 sprouty-related, EVH1 domain containing 1 0.021619
CDK19 cyclin-dependent kinase 19 0.0213697
MXI1 MAX interactor 1, dimerization protein 0.0212631
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0195475
PRELID2 PRELI domain containing 2 0.0193062
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0191623
KLF10 Kruppel-like factor 10 0.0188815
PEG10 paternally expressed 10 0.0187414
ARHGAP21 Rho GTPase activating protein 21 0.0187362
CXCL8 chemokine (C-X-C motif) ligand 8 0.0187233
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0186024
CCNL1 cyclin L1 0.0184441
LSAMP limbic system-associated membrane protein 0.0184096
CDC73 cell division cycle 73 0.0180934
NCKAP1 NCK-associated protein 1 0.0178464
EYA1 EYA transcriptional coactivator and phosphatase 1 0.0178405
RARB retinoic acid receptor, beta 0.0177146
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0173768
GLS2 glutaminase 2 (liver, mitochondrial) 0.0171694
VEZT vezatin, adherens junctions transmembrane protein 0.0170412
ADGRB3 adhesion G protein-coupled receptor B3 0.0168907
PLIN2 perilipin 2 0.0168905
KMT2E lysine (K)-specific methyltransferase 2E 0.0168491
HELZ helicase with zinc finger 0.0167325
ARRDC3 arrestin domain containing 3 0.0167007
MBNL1 muscleblind-like splicing regulator 1 0.0165697
ARID1A AT rich interactive domain 1A (SWI-like) 0.0165441
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0164621
PABPC1 poly(A) binding protein, cytoplasmic 1 0.016436
RAB8B RAB8B, member RAS oncogene family 0.0164167
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0163127
RUNX1 runt-related transcription factor 1 0.0162903
YEATS2 YEATS domain containing 2 0.0162107
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0156012
NRP2 neuropilin 2 0.0156008
PICALM phosphatidylinositol binding clathrin assembly protein 0.0155062
HIPK3 homeodomain interacting protein kinase 3 0.0153573
KCMF1 potassium channel modulatory factor 1 0.0152173
RB1CC1 RB1-inducible coiled-coil 1 0.0151492
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.015047
SMAD3 SMAD family member 3 0.0150143
MYOF myoferlin 0.0149243
CFAP20DC CFAP20 domain containing 0.0147782
PRKCE protein kinase C, epsilon 0.01472
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0146764
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0146072
WDR26 WD repeat domain 26 0.0146061
MIDEAS mitotic deacetylase associated SANT domain protein 0.0145496
NLGN1 neuroligin 1 0.0141987
FGFR1 fibroblast growth factor receptor 1 0.0140983
FRMD6 FERM domain containing 6 0.014092
ZFC3H1 zinc finger, C3H1-type containing 0.0140562
ZMYM2 zinc finger, MYM-type 2 0.0139681
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide 0.0139571
HSPA8 heat shock 70kDa protein 8 0.0139223
FLNB filamin B, beta 0.0138315
RBM26 RNA binding motif protein 26 0.0137304
ZEB2 zinc finger E-box binding homeobox 2 0.0137206
ANKRD12 ankyrin repeat domain 12 0.0136839
KDM7A lysine (K)-specific demethylase 7A 0.0135033
DST dystonin 0.0131401
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0131362
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0131092
DGKD diacylglycerol kinase, delta 130kDa 0.0131014
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0130552
PTBP2 polypyrimidine tract binding protein 2 0.013029
RAB6A RAB6A, member RAS oncogene family 0.0129378
CHSY1 chondroitin sulfate synthase 1 0.0129169
LDHA lactate dehydrogenase A 0.0128405

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.284622
VIM vimentin -0.217301
AKAP12 A kinase (PRKA) anchor protein 12 -0.127685
RPS6 ribosomal protein S6 -0.120715
AHNAK AHNAK nucleoprotein -0.117176
PTMA prothymosin, alpha -0.102763
TMSB10 thymosin beta 10 -0.10173
TPT1 tumor protein, translationally-controlled 1 -0.0867485
PRKG1 protein kinase, cGMP-dependent, type I -0.059493
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0559036
SAMD3 sterile alpha motif domain containing 3 -0.0536597
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0528077
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0504843
SDCCAG8 serologically defined colon cancer antigen 8 -0.0504658
RPLP1 ribosomal protein, large, P1 -0.0460285
PHACTR1 phosphatase and actin regulator 1 -0.0453403
NTM neurotrimin -0.0452006
RPL8 ribosomal protein L8 -0.0429486
RPL19 ribosomal protein L19 -0.040853
RPL12 ribosomal protein L12 -0.0406948
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0406371
RPLP2 ribosomal protein, large, P2 -0.0405895
NAP1L1 nucleosome assembly protein 1-like 1 -0.0389505
RPS13 ribosomal protein S13 -0.0388322
PTK2 protein tyrosine kinase 2 -0.0364555
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0364411
CAVIN1 caveolae associated protein 1 -0.0363795
EGR1 early growth response 1 -0.0359409
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0354431
FTL ferritin, light polypeptide -0.0350688
RPS27A ribosomal protein S27a -0.0350597
RPS8 ribosomal protein S8 -0.0337412
CDH13 cadherin 13 -0.0337067
RPS25 ribosomal protein S25 -0.0330169
PTPRK protein tyrosine phosphatase, receptor type, K -0.0328087
RPS21 ribosomal protein S21 -0.0323518
RPL34 ribosomal protein L34 -0.0321323
RPS24 ribosomal protein S24 -0.0317743
FOXP1 forkhead box P1 -0.0316726
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0311838
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0304085
TPM4 tropomyosin 4 -0.0299157
PTCHD4 patched domain containing 4 -0.0291418
RPS19 ribosomal protein S19 -0.0285133
EXT1 exostosin glycosyltransferase 1 -0.0282158
RPL35A ribosomal protein L35a -0.0277971
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0275765
ACTG1 actin gamma 1 -0.0275539
PARD3 par-3 family cell polarity regulator -0.0272882
RPL31 ribosomal protein L31 -0.026863
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.026711
RPL38 ribosomal protein L38 -0.0266555
CALD1 caldesmon 1 -0.0264458
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0263254
CDK6 cyclin-dependent kinase 6 -0.0263159
C2CD2 C2 calcium-dependent domain containing 2 -0.02606
RPL36A ribosomal protein L36a -0.026049
H1-0 H1.0 linker histone -0.0258353
RPS23 ribosomal protein S23 -0.0254287
RPL32 ribosomal protein L32 -0.0253626
ADAM19 ADAM metallopeptidase domain 19 -0.0248903
RPLP0 ribosomal protein, large, P0 -0.0246549
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0234753
RIGI RNA sensor RIG-I -0.023176
RPL11 ribosomal protein L11 -0.0231253
ZFAND3 zinc finger, AN1-type domain 3 -0.022971
KYNU kynureninase -0.0227156
YBX3 Y box binding protein 3 -0.0225565
ZNF804A zinc finger protein 804A -0.022504
INTS6 integrator complex subunit 6 -0.022156
IER3 immediate early response 3 -0.0217615
PTPRG protein tyrosine phosphatase, receptor type, G -0.021523
RPL36 ribosomal protein L36 -0.0214682
RPL23 ribosomal protein L23 -0.0214355
SP100 SP100 nuclear antigen -0.0211984
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0211208
DOCK4 dedicator of cytokinesis 4 -0.0210542
ASTN2 astrotactin 2 -0.0208863
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.020707
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0205725
RPL27A ribosomal protein L27a -0.0204036
CUX1 cut-like homeobox 1 -0.0202171
MSANTD3 Myb/SANT-like DNA-binding domain containing 3 -0.0199878
RPL7A ribosomal protein L7a -0.0198085
MYO10 myosin X -0.0196108
TM4SF1 transmembrane 4 L six family member 1 -0.0193623
ALCAM activated leukocyte cell adhesion molecule -0.0192344
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.019187
RPS14 ribosomal protein S14 -0.0190715
MT2A metallothionein 2A -0.0190331
RPS16 ribosomal protein S16 -0.0188782
RPL26 ribosomal protein L26 -0.0187112
RPS15 ribosomal protein S15 -0.0186188
RPS29 ribosomal protein S29 -0.0184307
RPL35 ribosomal protein L35 -0.0183782
FN1 fibronectin 1 -0.0183419
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0182905
RPS11 ribosomal protein S11 -0.0182686
KIAA1217 KIAA1217 -0.0182377
RPS10 ribosomal protein S10 -0.0182327