Pexidartinib (hydrochloride)_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pexidartinib (hydrochloride) perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pexidartinib (hydrochloride)_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.15988
CEMIP cell migration inducing protein, hyaluronan binding 0.149378
MUC6 mucin 6, oligomeric mucus/gel-forming 0.136235
FAT1 FAT atypical cadherin 1 0.132781
NDRG1 N-myc downstream regulated 1 0.126489
MUC5AC mucin 5AC, oligomeric mucus/gel-forming 0.114097
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0969332
FTH1 ferritin, heavy polypeptide 1 0.092753
LDHA lactate dehydrogenase A 0.0903845
TNS4 tensin 4 0.0869915
FAM13A family with sequence similarity 13, member A 0.0861053
TXNIP thioredoxin interacting protein 0.0850888
RPS2 ribosomal protein S2 0.0844994
PRELID2 PRELI domain containing 2 0.0783811
FLNB filamin B, beta 0.0779662
ITGA6 integrin, alpha 6 0.0761452
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0755547
RPS12 ribosomal protein S12 0.0707775
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0700158
ESYT2 extended synaptotagmin-like protein 2 0.0697477
EREG epiregulin 0.0691791
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0659019
PTPRR protein tyrosine phosphatase, receptor type, R 0.0646839
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0624315
ANXA2 annexin A2 0.0615765
KIF5B kinesin family member 5B 0.0604184
DSPP dentin sialophosphoprotein 0.0582029
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0561098
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0543777
MLEC malectin 0.0536302
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.053501
GPA33 glycoprotein A33 (transmembrane) 0.0527921
PGK1 phosphoglycerate kinase 1 0.0521251
ZNF292 zinc finger protein 292 0.0504695
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.049392
EHF ets homologous factor 0.0491578
CALB1 calbindin 1, 28kDa 0.0480962
DDIT4 DNA-damage-inducible transcript 4 0.0473684
UBA6 ubiquitin-like modifier activating enzyme 6 0.0463695
PTEN phosphatase and tensin homolog 0.0444408
CSNK1A1 casein kinase 1, alpha 1 0.0440778
MUC13 mucin 13, cell surface associated 0.04143
RNF43 ring finger protein 43 0.0396605
PPARG peroxisome proliferator-activated receptor gamma 0.0396388
HMGA1 high mobility group AT-hook 1 0.0394828
AREG amphiregulin 0.0394424
CEMIP2 cell migration inducing hyaluronidase 2 0.0394026
ENO1 enolase 1, (alpha) 0.0389454
RPS3 ribosomal protein S3 0.037848
ARHGAP26 Rho GTPase activating protein 26 0.0378467
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0378322
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0377326
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0376637
MXI1 MAX interactor 1, dimerization protein 0.0364494
PKP2 plakophilin 2 0.0358595
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0356801
SRRM2 serine/arginine repetitive matrix 2 0.0354477
KLF6 Kruppel-like factor 6 0.0352811
MUC5B mucin 5B, oligomeric mucus/gel-forming 0.0343709
FHL2 four and a half LIM domains 2 0.0342414
RACK1 receptor for activated C kinase 1 0.0342351
RPL37A ribosomal protein L37a 0.0339631
PCBP2 poly(rC) binding protein 2 0.0337691
SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 0.0326448
SET SET nuclear proto-oncogene 0.0323666
PFN1 profilin 1 0.0321254
CCNY cyclin Y 0.0321153
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0316593
SLCO1B3 solute carrier organic anion transporter family, member 1B3 0.0314445
CENPF centromere protein F, 350/400kDa 0.0312493
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0310078
SLK STE20-like kinase 0.0309769
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0305616
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0305109
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 0.0305094
KRT19 keratin 19, type I 0.0304875
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0304125
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0301651
CALR calreticulin 0.0301359
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0300973
CD46 CD46 molecule, complement regulatory protein 0.0300359
NUP58 nucleoporin 58 0.0299744
CDK19 cyclin-dependent kinase 19 0.0295997
MBNL1 muscleblind-like splicing regulator 1 0.029499
EZR ezrin 0.0292947
ITPRID2 ITPR interacting domain containing 2 0.0292095
RPL18 ribosomal protein L18 0.029177
KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 0.0290052
VEGFA vascular endothelial growth factor A 0.0288289
RPL23 ribosomal protein L23 0.0285757
CLDN4 claudin 4 0.0284949
EPCAM epithelial cell adhesion molecule 0.0281813
ASPH aspartate beta-hydroxylase 0.0280355
ATXN1 ataxin 1 0.027756
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0275267
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 0.0274797
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.0272797
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0271164
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0270693
B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 0.0270415

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.209144
PTMA prothymosin, alpha -0.16731
AHNAK AHNAK nucleoprotein -0.132844
TPT1 tumor protein, translationally-controlled 1 -0.107373
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0981462
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0729333
H1-0 H1.0 linker histone -0.0568938
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0476347
RPS24 ribosomal protein S24 -0.0425431
RPS6 ribosomal protein S6 -0.0424119
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0386806
CANX calnexin -0.0358726
IER3 immediate early response 3 -0.0346457
HDLBP high density lipoprotein binding protein -0.0333186
GCC2 GRIP and coiled-coil domain containing 2 -0.031739
RRBP1 ribosome binding protein 1 -0.0315794
VCL vinculin -0.0310931
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0310199
BTG1 B-cell translocation gene 1, anti-proliferative -0.0310159
AGR2 anterior gradient 2 -0.0295797
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0291403
HMGB1 high mobility group box 1 -0.0287064
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0282005
RPS21 ribosomal protein S21 -0.0273561
ALCAM activated leukocyte cell adhesion molecule -0.0268234
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0239782
CUX1 cut-like homeobox 1 -0.023598
OGA O-GlcNAcase -0.023185
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0223638
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0218672
H3-3B H3.3 histone B -0.0213276
RPL38 ribosomal protein L38 -0.0210597
UBE2I ubiquitin-conjugating enzyme E2I -0.0205591
FRMD5 FERM domain containing 5 -0.0203938
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0203346
EXT1 exostosin glycosyltransferase 1 -0.0201612
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0201353
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) -0.01992
PATJ PATJ crumbs cell polarity complex component -0.0195841
RAB1A RAB1A, member RAS oncogene family -0.0195707
CTTN cortactin -0.0195055
ATP5F1B ATP synthase F1 subunit beta -0.0193326
B4GALNT3 beta-1,4-N-acetyl-galactosaminyl transferase 3 -0.0192462
MYO1E myosin IE -0.0192101
KANK1 KN motif and ankyrin repeat domains 1 -0.019145
SDC4 syndecan 4 -0.0188517
DEK DEK proto-oncogene -0.0187418
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0185439
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0185151
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.018446
S100A10 S100 calcium binding protein A10 -0.0183574
COMMD10 COMM domain containing 10 -0.0180959
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0177252
PLEKHB2 pleckstrin homology domain containing, family B (evectins) member 2 -0.0176115
RAB10 RAB10, member RAS oncogene family -0.017593
RPL8 ribosomal protein L8 -0.0175442
SENP5 SUMO1/sentrin specific peptidase 5 -0.0174096
RPL14 ribosomal protein L14 -0.0173539
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0172878
MECOM MDS1 and EVI1 complex locus -0.0172582
AHI1 Abelson helper integration site 1 -0.0172269
MARCHF6 membrane associated ring-CH-type finger 6 -0.0171127
TMSB4X thymosin beta 4, X-linked -0.0170376
CCNL2 cyclin L2 -0.0166716
CDK12 cyclin-dependent kinase 12 -0.0166275
RPS15 ribosomal protein S15 -0.0166186
FUS FUS RNA binding protein -0.0166139
PRRC2B proline-rich coiled-coil 2B -0.016574
RPL6 ribosomal protein L6 -0.016324
SOX4 SRY (sex determining region Y)-box 4 -0.0159117
KDM4B lysine (K)-specific demethylase 4B -0.0158584
RBM6 RNA binding motif protein 6 -0.0156993
TFF1 trefoil factor 1 -0.0155805
NPR2 natriuretic peptide receptor 2 -0.0154091
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0153998
NSD2 nuclear receptor binding SET domain protein 2 -0.0153575
FAF1 Fas (TNFRSF6) associated factor 1 -0.0152523
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0152376
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0150155
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0149897
ANAPC5 anaphase promoting complex subunit 5 -0.0149592
ANKRD10 ankyrin repeat domain 10 -0.0148168
NRN1 neuritin 1 -0.0147909
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0143172
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0143054
UBC ubiquitin C -0.0142829
MAP4 microtubule-associated protein 4 -0.0142335
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) -0.0142035
PBRM1 polybromo 1 -0.0141924
RPLP2 ribosomal protein, large, P2 -0.0141754
RTN3 reticulon 3 -0.0141329
GMDS GDP-mannose 4,6-dehydratase -0.0140665
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 -0.0140656
PALLD palladin, cytoskeletal associated protein -0.0140135
RPS23 ribosomal protein S23 -0.0139868
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0139861
ANTXR2 anthrax toxin receptor 2 -0.0139769
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0139389
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0139138
UBE3C ubiquitin protein ligase E3C -0.0138425