Pexidartinib (hydrochloride)_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pexidartinib (hydrochloride) perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pexidartinib (hydrochloride)_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 0.12322
FTH1 ferritin, heavy polypeptide 1 0.10784
EEF2 eukaryotic translation elongation factor 2 0.094553
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0859713
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0854495
VIM vimentin 0.0633465
DOCK4 dedicator of cytokinesis 4 0.0493238
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0488569
THSD4 thrombospondin, type I, domain containing 4 0.0474621
PFN1 profilin 1 0.0457857
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0435445
RAD51B RAD51 paralog B 0.0428802
FLNB filamin B, beta 0.0413219
UBASH3B ubiquitin associated and SH3 domain containing B 0.0343989
PCBP1 poly(rC) binding protein 1 0.0337606
TMSB10 thymosin beta 10 0.0336437
FLNA filamin A, alpha 0.0331742
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0315906
MAML3 mastermind-like 3 (Drosophila) 0.0307183
ACTG1 actin gamma 1 0.0293768
PRR16 proline rich 16 0.027468
BICC1 BicC family RNA binding protein 1 0.0271928
MBNL1 muscleblind-like splicing regulator 1 0.0269648
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0261685
LDHA lactate dehydrogenase A 0.0261481
FMNL2 formin-like 2 0.0257014
ITGB5 integrin, beta 5 0.0250038
TOP2A topoisomerase (DNA) II alpha 170kDa 0.024786
HMGA1 high mobility group AT-hook 1 0.0246217
CMIP c-Maf inducing protein 0.0245535
PAWR PRKC, apoptosis, WT1, regulator 0.0239098
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0233481
PRPF8 pre-mRNA processing factor 8 0.0227715
SLC38A2 solute carrier family 38, member 2 0.0219261
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.021882
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0216264
PCBP2 poly(rC) binding protein 2 0.0215441
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0210535
NUP58 nucleoporin 58 0.0205803
ECT2 epithelial cell transforming 2 0.0204492
NEBL nebulette 0.0204416
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0203924
RACK1 receptor for activated C kinase 1 0.020001
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0199398
EGR1 early growth response 1 0.0195477
RPS12 ribosomal protein S12 0.0193157
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0192081
GLIS3 GLIS family zinc finger 3 0.0191447
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 0.0187929
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0185145
TTC28 tetratricopeptide repeat domain 28 0.0184413
PDE4D phosphodiesterase 4D, cAMP-specific 0.0183397
FGG fibrinogen gamma chain 0.0179716
ADGRG6 adhesion G protein-coupled receptor G6 0.0175319
ACTN1 actinin, alpha 1 0.0174771
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0172354
AUP1 ancient ubiquitous protein 1 0.0171404
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0167691
TGFB2 transforming growth factor, beta 2 0.0166847
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0165169
SMOC1 SPARC related modular calcium binding 1 0.0163257
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0162849
CDK2AP2 cyclin-dependent kinase 2 associated protein 2 0.0161594
ELL2 elongation factor, RNA polymerase II, 2 0.0158775
KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 0.0158529
MARCHF4 membrane associated ring-CH-type finger 4 0.0155554
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0155254
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0153539
BLTP2 bridge-like lipid transfer protein family member 2 0.0152737
DPYSL2 dihydropyrimidinase-like 2 0.0150796
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0149058
STT3A STT3A, subunit of the oligosaccharyltransferase complex (catalytic) 0.0148819
STRN3 striatin, calmodulin binding protein 3 0.0148289
CXCL8 chemokine (C-X-C motif) ligand 8 0.014765
P3H2 prolyl 3-hydroxylase 2 0.0147356
EFNA5 ephrin-A5 0.0146324
UBAP2L ubiquitin associated protein 2-like 0.0143258
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.014061
EGFR epidermal growth factor receptor 0.0139288
MYO19 myosin XIX 0.0138287
NFE2L1 nuclear factor, erythroid 2-like 1 0.0138164
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0137364
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0135834
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0135406
CABIN1 calcineurin binding protein 1 0.013519
PYGL phosphorylase, glycogen, liver 0.0132583
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0132233
TNPO3 transportin 3 0.0131277
FOXP1 forkhead box P1 0.0131091
KLF6 Kruppel-like factor 6 0.012999
HMGA2 high mobility group AT-hook 2 0.0127173
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0127119
DCLK2 doublecortin-like kinase 2 0.0126778
EPC1 enhancer of polycomb homolog 1 (Drosophila) 0.0126301
TIMM23B translocase of inner mitochondrial membrane 23 homolog B (yeast) 0.0125142
YTHDF3 YTH N(6)-methyladenosine RNA binding protein 3 0.0124862
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0122506
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0122377
NFIB nuclear factor I/B 0.012213
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.012102

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.251297
MT2A metallothionein 2A -0.195262
TM4SF1 transmembrane 4 L six family member 1 -0.139452
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.120538
TFPI2 tissue factor pathway inhibitor 2 -0.115641
PTMA prothymosin, alpha -0.101919
TXNRD1 thioredoxin reductase 1 -0.096168
IER3 immediate early response 3 -0.0941363
FTL ferritin, light polypeptide -0.0863915
RPL19 ribosomal protein L19 -0.0843018
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0840316
RPS6 ribosomal protein S6 -0.0682182
RPS21 ribosomal protein S21 -0.0668643
EIF1 eukaryotic translation initiation factor 1 -0.066131
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0588858
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0574867
ZFAND3 zinc finger, AN1-type domain 3 -0.0567012
AHNAK AHNAK nucleoprotein -0.051999
DENND4A DENN/MADD domain containing 4A -0.0515207
AKAP12 A kinase (PRKA) anchor protein 12 -0.0506083
TPM3 tropomyosin 3 -0.0501514
RPS4Y1 ribosomal protein S4, Y-linked 1 -0.0486597
TPT1 tumor protein, translationally-controlled 1 -0.0465449
C15ORF48 chromosome 15 open reading frame 48 -0.0426708
S100A10 S100 calcium binding protein A10 -0.0424734
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0421871
KTN1 kinectin 1 (kinesin receptor) -0.0411172
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0406136
RPS25 ribosomal protein S25 -0.0400799
RPL8 ribosomal protein L8 -0.0395106
DSCAM Down syndrome cell adhesion molecule -0.0383955
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.037668
CFLAR CASP8 and FADD-like apoptosis regulator -0.0374762
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0360885
RPS27A ribosomal protein S27a -0.0360486
CANX calnexin -0.0360309
RBM39 RNA binding motif protein 39 -0.0358935
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0355881
ASPH aspartate beta-hydroxylase -0.0352691
UBC ubiquitin C -0.0352008
RPS15 ribosomal protein S15 -0.0343208
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0339907
RTN4 reticulon 4 -0.0333715
RPS8 ribosomal protein S8 -0.0333046
RPS23 ribosomal protein S23 -0.0324194
BASP1 brain abundant, membrane attached signal protein 1 -0.0322633
SETD5 SET domain containing 5 -0.0316924
RHEB Ras homolog enriched in brain -0.031589
RPLP1 ribosomal protein, large, P1 -0.0310204
FAM107B family with sequence similarity 107, member B -0.0305455
SRGN serglycin -0.0305252
ATP5F1B ATP synthase F1 subunit beta -0.0294714
RPS5 ribosomal protein S5 -0.0293252
NOP58 NOP58 ribonucleoprotein -0.0291661
NAMPT nicotinamide phosphoribosyltransferase -0.0291604
YBX3 Y box binding protein 3 -0.0290744
RAB1A RAB1A, member RAS oncogene family -0.0289694
RPL38 ribosomal protein L38 -0.02856
FGB fibrinogen beta chain -0.0279653
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0278216
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.027801
SOD2 superoxide dismutase 2, mitochondrial -0.0273686
TRIP12 thyroid hormone receptor interactor 12 -0.0272801
NAP1L1 nucleosome assembly protein 1-like 1 -0.0271726
RPS10 ribosomal protein S10 -0.0271319
RPL7 ribosomal protein L7 -0.0266138
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0264474
GOLGB1 golgin B1 -0.026294
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0259482
RAD21 RAD21 homolog (S. pombe) -0.0259271
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0256296
DST dystonin -0.0253295
RPS24 ribosomal protein S24 -0.0250637
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0246024
B2M beta-2-microglobulin -0.0244775
STAU1 staufen double-stranded RNA binding protein 1 -0.0244511
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0244487
DEK DEK proto-oncogene -0.0243639
ANKRD11 ankyrin repeat domain 11 -0.0242915
MARCHF6 membrane associated ring-CH-type finger 6 -0.0240999
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0240883
ASTN2 astrotactin 2 -0.0239849
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) -0.0239621
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0239454
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0238297
S100A6 S100 calcium binding protein A6 -0.0233514
BCLAF1 BCL2-associated transcription factor 1 -0.0232352
ACTR3 ARP3 actin-related protein 3 homolog (yeast) -0.0229581
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0226116
CAVIN1 caveolae associated protein 1 -0.0226046
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0224636
RPL12 ribosomal protein L12 -0.0223894
HNRNPM heterogeneous nuclear ribonucleoprotein M -0.0223079
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 -0.0222939
RPL36A ribosomal protein L36a -0.0222561
SERF2 small EDRK-rich factor 2 -0.0222104
S100A9 S100 calcium binding protein A9 -0.022137
RPS11 ribosomal protein S11 -0.0221315
ARPP19 cAMP-regulated phosphoprotein, 19kDa -0.0220809
SDC4 syndecan 4 -0.0220357