Pexidartinib (hydrochloride)_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pexidartinib (hydrochloride) perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pexidartinib (hydrochloride)_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
KRT17 keratin 17, type I 0.1755
NDRG1 N-myc downstream regulated 1 0.168187
FLNB filamin B, beta 0.0971417
ELL2 elongation factor, RNA polymerase II, 2 0.0957625
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0953534
NAMPT nicotinamide phosphoribosyltransferase 0.0848311
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0820679
PSD3 pleckstrin and Sec7 domain containing 3 0.0790116
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0775424
TXNRD1 thioredoxin reductase 1 0.077502
RPS3 ribosomal protein S3 0.073703
KYNU kynureninase 0.0716662
HOOK2 hook microtubule-tethering protein 2 0.0708024
TRIO trio Rho guanine nucleotide exchange factor 0.0701443
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0693084
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0687516
PCLO piccolo presynaptic cytomatrix protein 0.0652145
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.063743
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0625166
OLA1 Obg-like ATPase 1 0.0625064
OGA O-GlcNAcase 0.062025
FLNA filamin A, alpha 0.0616403
LAMB3 laminin, beta 3 0.0611403
RSRC2 arginine/serine-rich coiled-coil 2 0.0610939
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0601392
DTNA dystrobrevin, alpha 0.0590797
ANXA2 annexin A2 0.0590592
AKAP12 A kinase (PRKA) anchor protein 12 0.0585302
RPL34 ribosomal protein L34 0.0545742
UGCG UDP-glucose ceramide glucosyltransferase 0.0531279
NALF1 NALCN channel auxiliary factor 1 0.053004
FN1 fibronectin 1 0.0524238
PICALM phosphatidylinositol binding clathrin assembly protein 0.0512434
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0509671
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0505929
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0505504
FNDC3B fibronectin type III domain containing 3B 0.0492378
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0491142
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0491125
GOLGA4 golgin A4 0.0487243
GPHN gephyrin 0.0484447
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0478826
RACK1 receptor for activated C kinase 1 0.0473848
RAB7A RAB7A, member RAS oncogene family 0.0471473
USP3 ubiquitin specific peptidase 3 0.0467344
PDE4D phosphodiesterase 4D, cAMP-specific 0.0463975
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0463468
MYO10 myosin X 0.0462054
PTPRA protein tyrosine phosphatase, receptor type, A 0.04606
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0460157
ASPH aspartate beta-hydroxylase 0.044421
SPAG9 sperm associated antigen 9 0.0442863
FMNL2 formin-like 2 0.0434091
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0432794
TMSB10 thymosin beta 10 0.0413972
RPS8 ribosomal protein S8 0.0413715
COG5 component of oligomeric golgi complex 5 0.0412737
TOP1 topoisomerase (DNA) I 0.0412691
EFNA5 ephrin-A5 0.0403705
PGK1 phosphoglycerate kinase 1 0.039821
UBA6 ubiquitin-like modifier activating enzyme 6 0.0397894
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0388145
NPEPPS aminopeptidase puromycin sensitive 0.0386827
BBX bobby sox homolog (Drosophila) 0.0384743
CLINT1 clathrin interactor 1 0.0379639
PTPRG protein tyrosine phosphatase, receptor type, G 0.0378305
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0377118
KMT2E lysine (K)-specific methyltransferase 2E 0.0376964
HMGA1 high mobility group AT-hook 1 0.0374345
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0371755
RPL37 ribosomal protein L37 0.0367514
CALU calumenin 0.0359555
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0354906
KTN1 kinectin 1 (kinesin receptor) 0.0352859
CDK17 cyclin-dependent kinase 17 0.0351438
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0350317
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0347641
TPT1 tumor protein, translationally-controlled 1 0.0343662
GNAS GNAS complex locus 0.0336625
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.033562
ANKRD11 ankyrin repeat domain 11 0.0333862
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0333196
BIRC6 baculoviral IAP repeat containing 6 0.0332918
MSI2 musashi RNA-binding protein 2 0.0330547
NAP1L1 nucleosome assembly protein 1-like 1 0.0324302
RPL37A ribosomal protein L37a 0.0322409
VCL vinculin 0.0319834
RSF1 remodeling and spacing factor 1 0.0318181
SMYD3 SET and MYND domain containing 3 0.0315963
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.031462
INHBA inhibin, beta A 0.0306639
RBM33 RNA binding motif protein 33 0.0300387
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0296894
FTL ferritin, light polypeptide 0.0293171
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0283538
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.028227
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0279713
HELZ helicase with zinc finger 0.0275959
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0275746
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0275051

decreased expression

Symbol Name Standardized Value
BACE2 beta-site APP-cleaving enzyme 2 -0.130714
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.124038
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.122814
MUC16 mucin 16, cell surface associated -0.117632
LMO7 LIM domain 7 -0.112484
SAMD4A sterile alpha motif domain containing 4A -0.110805
NKD1 naked cuticle homolog 1 (Drosophila) -0.0936627
MACF1 microtubule-actin crosslinking factor 1 -0.0905214
EXT1 exostosin glycosyltransferase 1 -0.0868512
CEMIP cell migration inducing protein, hyaluronan binding -0.0792541
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.0779318
LGALS3 lectin, galactoside-binding, soluble, 3 -0.0706097
MYO1E myosin IE -0.0704051
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0672201
ZNF292 zinc finger protein 292 -0.0667729
ATOSA atos homolog A -0.066514
INSIG1 insulin induced gene 1 -0.0655452
SVIL supervillin -0.0655215
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0646379
LIMCH1 LIM and calponin homology domains 1 -0.0638521
PTPRM protein tyrosine phosphatase, receptor type, M -0.0634421
GOLGB1 golgin B1 -0.0608099
VGF VGF nerve growth factor inducible -0.0604248
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0604037
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0580754
AKAP13 A kinase (PRKA) anchor protein 13 -0.0580132
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0570656
SRPK2 SRSF protein kinase 2 -0.0558658
AHNAK AHNAK nucleoprotein -0.0550969
MCL1 myeloid cell leukemia 1 -0.054839
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) -0.0545288
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0533402
IGF1R insulin-like growth factor 1 receptor -0.0533247
PEAK1 pseudopodium-enriched atypical kinase 1 -0.052543
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0522973
NPTN neuroplastin -0.0502896
KIF5B kinesin family member 5B -0.0502095
SRSF11 serine/arginine-rich splicing factor 11 -0.0478997
MYO5B myosin VB -0.0478661
EGFR epidermal growth factor receptor -0.047395
ABHD17C abhydrolase domain containing 17C -0.0457342
PLK2 polo-like kinase 2 -0.044367
AGO3 argonaute RISC catalytic component 3 -0.0443058
USP33 ubiquitin specific peptidase 33 -0.0442343
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.0441445
JUP junction plakoglobin -0.0439915
CSNK1A1 casein kinase 1, alpha 1 -0.0435408
CNKSR3 CNKSR family member 3 -0.0427549
LPP LIM domain containing preferred translocation partner in lipoma -0.0423927
MCTP1 multiple C2 domains, transmembrane 1 -0.0406883
PELI1 pellino E3 ubiquitin protein ligase 1 -0.0404891
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.039771
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0392865
AK1 adenylate kinase 1 -0.0388729
NCOR1 nuclear receptor corepressor 1 -0.0384309
NEK7 NIMA-related kinase 7 -0.037529
HLA-B major histocompatibility complex, class I, B -0.0371336
SRP72 signal recognition particle 72kDa -0.0369535
CUX1 cut-like homeobox 1 -0.0363838
RNF145 ring finger protein 145 -0.0361922
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0359204
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0358158
ESYT2 extended synaptotagmin-like protein 2 -0.0355342
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.035438
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0349944
RPL8 ribosomal protein L8 -0.0349877
ILRUN inflammation and lipid regulator with UBA-like and NBR1-like domains -0.034574
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0344764
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0343831
DSCAM Down syndrome cell adhesion molecule -0.0342817
IGFBP3 insulin-like growth factor binding protein 3 -0.0342267
KLF6 Kruppel-like factor 6 -0.0338181
ERBIN erbb2 interacting protein -0.0337844
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0336748
GCC2 GRIP and coiled-coil domain containing 2 -0.0329878
ATXN1 ataxin 1 -0.0326515
MAST4 microtubule associated serine/threonine kinase family member 4 -0.0320794
RREB1 ras responsive element binding protein 1 -0.0320013
FOXO3 forkhead box O3 -0.0313852
ANKRD17 ankyrin repeat domain 17 -0.0308895
PRELID2 PRELI domain containing 2 -0.0308422
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 -0.030764
PATJ PATJ crumbs cell polarity complex component -0.0305492
BZW1 basic leucine zipper and W2 domains 1 -0.0304718
OSBPL8 oxysterol binding protein-like 8 -0.0303081
RAB8B RAB8B, member RAS oncogene family -0.0300589
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.0300451
OSMR oncostatin M receptor -0.0299498
SMOC1 SPARC related modular calcium binding 1 -0.0295185
RB1CC1 RB1-inducible coiled-coil 1 -0.0294663
PUM2 pumilio RNA-binding family member 2 -0.0294638
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0292457
COPB1 coatomer protein complex, subunit beta 1 -0.028915
SMAD2 SMAD family member 2 -0.0288254
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0285942
NUP98 nucleoporin 98kDa -0.0280673
UBE2H ubiquitin-conjugating enzyme E2H -0.0280004
SMAD3 SMAD family member 3 -0.0274229
BMAL2 basic helix-loop-helix ARNT like 2 -0.0273602
ENO1 enolase 1, (alpha) -0.0272265