Pexidartinib (hydrochloride)_hTERT-HPNE Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pexidartinib (hydrochloride) perturbation in hTERT-HPNE cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pexidartinib (hydrochloride)_hTERT-HPNE drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CD44 CD44 molecule (Indian blood group) 0.0861803
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0703428
TRIO trio Rho guanine nucleotide exchange factor 0.0618769
NDRG1 N-myc downstream regulated 1 0.0584447
FNDC3B fibronectin type III domain containing 3B 0.0578309
FAM13A family with sequence similarity 13, member A 0.0566724
EEF2 eukaryotic translation elongation factor 2 0.0529143
RUNX1 runt-related transcription factor 1 0.0488404
ELL2 elongation factor, RNA polymerase II, 2 0.0474745
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0416841
MYH9 myosin, heavy chain 9, non-muscle 0.0408828
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0371611
MT2A metallothionein 2A 0.0361183
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.035264
ZNF292 zinc finger protein 292 0.0349227
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 0.0346005
SMAD3 SMAD family member 3 0.033282
NFE2L1 nuclear factor, erythroid 2-like 1 0.03283
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0303439
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0291416
CENPF centromere protein F, 350/400kDa 0.028546
ADGRB3 adhesion G protein-coupled receptor B3 0.0279925
FLNA filamin A, alpha 0.0276636
NAMPT nicotinamide phosphoribosyltransferase 0.0264278
NAV2 neuron navigator 2 0.0264106
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0260533
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0257702
PTEN phosphatase and tensin homolog 0.0255298
RPS12 ribosomal protein S12 0.0254839
NOTCH2 notch 2 0.0254832
FTH1 ferritin, heavy polypeptide 1 0.0253308
RPS2 ribosomal protein S2 0.025183
VEGFA vascular endothelial growth factor A 0.0251075
TIMP2 TIMP metallopeptidase inhibitor 2 0.0248321
EPAS1 endothelial PAS domain protein 1 0.0244147
ARRDC3 arrestin domain containing 3 0.0238586
PCBP2 poly(rC) binding protein 2 0.0231669
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0223771
BHLHE40 basic helix-loop-helix family, member e40 0.0223024
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0220182
PFN1 profilin 1 0.0218359
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0216963
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0215926
NUP58 nucleoporin 58 0.0212826
HILPDA hypoxia inducible lipid droplet-associated 0.0210522
YEATS2 YEATS domain containing 2 0.0207307
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0206449
PDE4D phosphodiesterase 4D, cAMP-specific 0.0206355
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0204131
CYB5R3 cytochrome b5 reductase 3 0.0203683
PRELID2 PRELI domain containing 2 0.0203269
MYOF myoferlin 0.0202935
ZNF638 zinc finger protein 638 0.0202371
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0196011
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0193198
COL5A2 collagen, type V, alpha 2 0.0191983
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0191315
MSN moesin 0.0191278
C1D C1D nuclear receptor corepressor 0.0189447
SPAG9 sperm associated antigen 9 0.0184417
METTL15 methyltransferase like 15 0.0183112
RPL37A ribosomal protein L37a 0.0178812
LDHA lactate dehydrogenase A 0.0178364
TFG TRK-fused gene 0.0176283
TNS1 tensin 1 0.0175621
ANKRD12 ankyrin repeat domain 12 0.0175613
SFPQ splicing factor proline/glutamine-rich 0.0175509
AKAP9 A kinase (PRKA) anchor protein 9 0.0174469
CCNL1 cyclin L1 0.0170512
CUL3 cullin 3 0.0169941
HMGA1 high mobility group AT-hook 1 0.0165857
SET SET nuclear proto-oncogene 0.0165773
HELZ helicase with zinc finger 0.016369
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0163596
SOD2 superoxide dismutase 2, mitochondrial 0.0161211
RPL23 ribosomal protein L23 0.0161084
MXI1 MAX interactor 1, dimerization protein 0.016037
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0159199
CHD1 chromodomain helicase DNA binding protein 1 0.0159069
CSNK1A1 casein kinase 1, alpha 1 0.0158529
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0156411
KIF5B kinesin family member 5B 0.0155991
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0155594
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0155459
ANKRD17 ankyrin repeat domain 17 0.0155218
PKM pyruvate kinase, muscle 0.0153162
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 0.0152188
DSCAM Down syndrome cell adhesion molecule 0.0151763
ZSWIM6 zinc finger, SWIM-type containing 6 0.0149868
RB1CC1 RB1-inducible coiled-coil 1 0.0149755
RAB8B RAB8B, member RAS oncogene family 0.0149259
OGA O-GlcNAcase 0.0146386
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0142671
KDM2A lysine (K)-specific demethylase 2A 0.0142624
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0142325
DDIT4 DNA-damage-inducible transcript 4 0.0141424
PLPP3 phospholipid phosphatase 3 0.0141148
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0139373
HMGB2 high mobility group box 2 0.0138427
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0137812

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.255924
INHBA inhibin, beta A -0.245663
COL1A1 collagen, type I, alpha 1 -0.182919
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.152893
AKAP12 A kinase (PRKA) anchor protein 12 -0.151519
MMP1 matrix metallopeptidase 1 -0.130495
HMGA2 high mobility group AT-hook 2 -0.130088
STC1 stanniocalcin 1 -0.121073
AHNAK AHNAK nucleoprotein -0.108854
PRKG1 protein kinase, cGMP-dependent, type I -0.102052
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0913219
EMP1 epithelial membrane protein 1 -0.0882118
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0863571
COL1A2 collagen, type I, alpha 2 -0.0843818
TPT1 tumor protein, translationally-controlled 1 -0.0790356
COL6A3 collagen, type VI, alpha 3 -0.0762472
CAVIN1 caveolae associated protein 1 -0.0762188
FN1 fibronectin 1 -0.0750095
ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 -0.0747775
GREM1 gremlin 1, DAN family BMP antagonist -0.0703056
FBN1 fibrillin 1 -0.0671613
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0654904
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0588366
TM4SF1 transmembrane 4 L six family member 1 -0.0565303
RAI14 retinoic acid induced 14 -0.0524085
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0523155
HLA-B major histocompatibility complex, class I, B -0.0508185
COL6A2 collagen, type VI, alpha 2 -0.0503045
CDH13 cadherin 13 -0.0494977
TFPI2 tissue factor pathway inhibitor 2 -0.0456882
CANX calnexin -0.0451674
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0436116
SAMD3 sterile alpha motif domain containing 3 -0.0421175
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.04207
TMSB10 thymosin beta 10 -0.0420568
CCND1 cyclin D1 -0.041351
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0409939
NALF1 NALCN channel auxiliary factor 1 -0.0404711
CLMP CXADR-like membrane protein -0.0380661
VIM vimentin -0.0374276
COL3A1 collagen, type III, alpha 1 -0.0372404
PRRX1 paired related homeobox 1 -0.0371959
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0370948
AFF3 AF4/FMR2 family, member 3 -0.0367696
TPM4 tropomyosin 4 -0.0364445
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0357291
HDLBP high density lipoprotein binding protein -0.0355468
OXR1 oxidation resistance 1 -0.0345459
NPTX1 neuronal pentraxin I -0.0339265
ZEB1 zinc finger E-box binding homeobox 1 -0.0334841
NCKAP5 NCK-associated protein 5 -0.0330019
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0306772
MAML3 mastermind-like 3 (Drosophila) -0.0302684
H1-0 H1.0 linker histone -0.0301158
ARHGAP22 Rho GTPase activating protein 22 -0.0298867
PTMA prothymosin, alpha -0.0295617
RFX8 RFX family member 8, lacking RFX DNA binding domain -0.0292253
EXT1 exostosin glycosyltransferase 1 -0.0291926
DIAPH2 diaphanous-related formin 2 -0.0290069
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0289287
MMP12 matrix metallopeptidase 12 -0.0284222
MAP1B microtubule-associated protein 1B -0.0280593
DNER delta/notch-like EGF repeat containing -0.0254961
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0253369
IER3 immediate early response 3 -0.0253119
BTG1 B-cell translocation gene 1, anti-proliferative -0.0250944
STXBP5 syntaxin binding protein 5 (tomosyn) -0.0246474
FSTL1 follistatin-like 1 -0.0245345
ANKRD11 ankyrin repeat domain 11 -0.0242551
EIF1 eukaryotic translation initiation factor 1 -0.0242242
KIAA1549L KIAA1549-like -0.0238
ABI3BP ABI family, member 3 (NESH) binding protein -0.0236024
PRSS23 protease, serine, 23 -0.0234021
SYNE1 spectrin repeat containing, nuclear envelope 1 -0.0229855
LMAN1 lectin, mannose-binding, 1 -0.0227167
HLA-A major histocompatibility complex, class I, A -0.0225182
MAP4 microtubule-associated protein 4 -0.0215484
ATP13A3 ATPase type 13A3 -0.0213765
FRMD4A FERM domain containing 4A -0.0213686
TMSB4X thymosin beta 4, X-linked -0.0212936
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0211714
HHIP hedgehog interacting protein -0.0199875
INSIG1 insulin induced gene 1 -0.0198453
FOXP1 forkhead box P1 -0.0198122
WNT5A wingless-type MMTV integration site family, member 5A -0.0197719
CTSB cathepsin B -0.0196868
COL5A3 collagen, type V, alpha 3 -0.0196593
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0192877
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0189134
ANTXR2 anthrax toxin receptor 2 -0.0188371
COL5A1 collagen, type V, alpha 1 -0.0187651
ARFGAP3 ADP-ribosylation factor GTPase activating protein 3 -0.0182537
ARHGAP24 Rho GTPase activating protein 24 -0.0182367
RRBP1 ribosome binding protein 1 -0.0182267
LOXL2 lysyl oxidase-like 2 -0.0181518
AEBP2 AE binding protein 2 -0.0181084
NAA16 N(alpha)-acetyltransferase 16, NatA auxiliary subunit -0.0180804
SASH1 SAM and SH3 domain containing 1 -0.018
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.017932
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0178116