Phenytoin (sodium)_CFPAC-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Phenytoin (sodium) perturbation in CFPAC-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Phenytoin (sodium)_CFPAC-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.173409
LAMB3 laminin, beta 3 0.16061
NDRG1 N-myc downstream regulated 1 0.135455
ANXA2 annexin A2 0.131199
HLA-C major histocompatibility complex, class I, C 0.128539
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.126271
LOC112694756 uncharaterized LOC112694756 0.111094
MYH9 myosin, heavy chain 9, non-muscle 0.0981996
TMSB4X thymosin beta 4, X-linked 0.0976158
SMAD3 SMAD family member 3 0.0972976
AKAP12 A kinase (PRKA) anchor protein 12 0.0961359
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0958666
IGFBP3 insulin-like growth factor binding protein 3 0.0929765
FAM13A family with sequence similarity 13, member A 0.0916384
ACTG1 actin gamma 1 0.0849394
FLNB filamin B, beta 0.0805338
SPAG9 sperm associated antigen 9 0.0805117
AHNAK2 AHNAK nucleoprotein 2 0.0790511
FNDC3B fibronectin type III domain containing 3B 0.0777917
PGK1 phosphoglycerate kinase 1 0.0770462
TSC22D2 TSC22 domain family, member 2 0.0717084
EZR ezrin 0.0711978
LAMC2 laminin, gamma 2 0.0702971
CCNY cyclin Y 0.0698127
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) 0.0681402
PLEC plectin 0.0675381
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0653861
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0630755
DTNA dystrobrevin, alpha 0.0630356
CXCL8 chemokine (C-X-C motif) ligand 8 0.062708
FTH1 ferritin, heavy polypeptide 1 0.0618563
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0618431
TRIO trio Rho guanine nucleotide exchange factor 0.0616848
GRB10 growth factor receptor-bound protein 10 0.0610656
HSPA8 heat shock 70kDa protein 8 0.060113
SAMD4A sterile alpha motif domain containing 4A 0.0600829
AHNAK AHNAK nucleoprotein 0.0594461
TNIP1 TNFAIP3 interacting protein 1 0.0584511
DDIT4 DNA-damage-inducible transcript 4 0.0572898
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0558197
HOOK2 hook microtubule-tethering protein 2 0.0548669
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0534397
ASPH aspartate beta-hydroxylase 0.0527365
APP amyloid beta (A4) precursor protein 0.0507392
ELL2 elongation factor, RNA polymerase II, 2 0.0505902
FLNA filamin A, alpha 0.0498896
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0480803
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0475167
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0449644
HPCAL1 hippocalcin-like 1 0.04472
KDM3A lysine (K)-specific demethylase 3A 0.0444097
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0443131
NAMPT nicotinamide phosphoribosyltransferase 0.0441059
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0440571
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.044034
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0432247
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0427368
EIF4H eukaryotic translation initiation factor 4H 0.0421487
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0418592
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0417671
ANKRD11 ankyrin repeat domain 11 0.0414454
MEF2A myocyte enhancer factor 2A 0.0407136
OGA O-GlcNAcase 0.0400899
MCL1 myeloid cell leukemia 1 0.039106
WDR45B WD repeat domain 45B 0.0390894
HSPG2 heparan sulfate proteoglycan 2 0.0389473
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.038665
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0383135
EEF2 eukaryotic translation elongation factor 2 0.0381954
OPTN optineurin 0.0378707
AKAP13 A kinase (PRKA) anchor protein 13 0.0377986
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.037532
MARCHF6 membrane associated ring-CH-type finger 6 0.0372427
HDLBP high density lipoprotein binding protein 0.0370347
UBA6 ubiquitin-like modifier activating enzyme 6 0.0367507
F3 coagulation factor III (thromboplastin, tissue factor) 0.0366549
BACE2 beta-site APP-cleaving enzyme 2 0.0361145
YTHDC1 YTH domain containing 1 0.0358014
TM4SF1 transmembrane 4 L six family member 1 0.0355017
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0352935
DSPP dentin sialophosphoprotein 0.0349996
LAMA4 laminin, alpha 4 0.0348048
ESYT2 extended synaptotagmin-like protein 2 0.0347306
ERRFI1 ERBB receptor feedback inhibitor 1 0.0346421
LASP1 LIM and SH3 protein 1 0.0345115
ENO1 enolase 1, (alpha) 0.0343081
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0342017
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0339837
BHLHE40 basic helix-loop-helix family, member e40 0.0339439
ADAM9 ADAM metallopeptidase domain 9 0.0335763
YBX1 Y box binding protein 1 0.0331483
RAB8B RAB8B, member RAS oncogene family 0.0330532
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0330168
FNBP1L formin binding protein 1-like 0.032533
CDC73 cell division cycle 73 0.0315934
CALR calreticulin 0.0312501
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.0310055
BIRC3 baculoviral IAP repeat containing 3 0.0309524
ARRDC3 arrestin domain containing 3 0.0308869
ACTN4 actinin, alpha 4 0.0308572

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.299074
MT2A metallothionein 2A -0.163366
FTL ferritin, light polypeptide -0.081663
HLA-B major histocompatibility complex, class I, B -0.0747317
IFI27 interferon, alpha-inducible protein 27 -0.067172
TPT1 tumor protein, translationally-controlled 1 -0.0514184
B2M beta-2-microglobulin -0.0505675
TMSB10 thymosin beta 10 -0.050312
S100A10 S100 calcium binding protein A10 -0.0487233
RPS29 ribosomal protein S29 -0.0443205
PTMA prothymosin, alpha -0.0442495
RPS23 ribosomal protein S23 -0.0439222
EIF1 eukaryotic translation initiation factor 1 -0.0431385
LCN2 lipocalin 2 -0.0419159
IFI6 interferon, alpha-inducible protein 6 -0.0414327
EGR1 early growth response 1 -0.0395863
ZFP36L1 ZFP36 ring finger protein-like 1 -0.038175
RPS25 ribosomal protein S25 -0.0358898
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.0358571
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0346116
RPS6 ribosomal protein S6 -0.0327922
ALCAM activated leukocyte cell adhesion molecule -0.0318468
RPS8 ribosomal protein S8 -0.0316864
ISG15 ISG15 ubiquitin-like modifier -0.0309656
C15ORF48 chromosome 15 open reading frame 48 -0.0309068
RPL28 ribosomal protein L28 -0.0306297
BPTF bromodomain PHD finger transcription factor -0.030246
NABP1 nucleic acid binding protein 1 -0.0300842
HMGA1 high mobility group AT-hook 1 -0.0299458
RPS24 ribosomal protein S24 -0.0298074
TXNIP thioredoxin interacting protein -0.0296628
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0294441
RPL19 ribosomal protein L19 -0.0279893
BLZF1 basic leucine zipper nuclear factor 1 -0.0279664
RPL31 ribosomal protein L31 -0.027884
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0278105
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0275305
LOC102724023 ES1 protein homolog, mitochondrial -0.0274174
RPL36A ribosomal protein L36a -0.0272433
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0269413
RPS11 ribosomal protein S11 -0.0267042
LY6E lymphocyte antigen 6 complex, locus E -0.026396
RPLP1 ribosomal protein, large, P1 -0.0255827
MX2 MX dynamin-like GTPase 2 -0.0255408
RAB7A RAB7A, member RAS oncogene family -0.0250946
CCNI cyclin I -0.023831
RPL8 ribosomal protein L8 -0.0237325
PLAT plasminogen activator, tissue -0.0235954
RPS19 ribosomal protein S19 -0.0235938
ZBTB20 zinc finger and BTB domain containing 20 -0.023022
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0229273
GPHN gephyrin -0.022865
RPLP2 ribosomal protein, large, P2 -0.0227035
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0221858
MDK midkine (neurite growth-promoting factor 2) -0.022047
IFITM1 interferon induced transmembrane protein 1 -0.0220213
RPL9 ribosomal protein L9 -0.0218808
RPS16 ribosomal protein S16 -0.0218062
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.021698
RPS14 ribosomal protein S14 -0.0216751
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0215015
PMP22 peripheral myelin protein 22 -0.0214174
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0212479
EXT1 exostosin glycosyltransferase 1 -0.0210864
IFITM3 interferon induced transmembrane protein 3 -0.0206995
NUMB numb homolog (Drosophila) -0.0202679
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0200008
ADAM28 ADAM metallopeptidase domain 28 -0.0198983
GCC2 GRIP and coiled-coil domain containing 2 -0.0193489
CDCP1 CUB domain containing protein 1 -0.0187857
HDAC9 histone deacetylase 9 -0.0186399
RPS10 ribosomal protein S10 -0.0185824
ZMYND8 zinc finger, MYND-type containing 8 -0.018567
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0185044
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0184572
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0183737
S100A11 S100 calcium binding protein A11 -0.0183533
UBC ubiquitin C -0.0182684
FBXL20 F-box and leucine-rich repeat protein 20 -0.0182624
MUC1 mucin 1, cell surface associated -0.0182218
BCL2L1 BCL2-like 1 -0.0181306
AREG amphiregulin -0.0181084
RPL23 ribosomal protein L23 -0.017855
PKM pyruvate kinase, muscle -0.0178311
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0176446
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0175524
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0174685
MT1E metallothionein 1E -0.0172955
RPS15 ribosomal protein S15 -0.0172734
INTS6 integrator complex subunit 6 -0.0172198
NRP1 neuropilin 1 -0.017083
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0170757
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0170701
KRT19 keratin 19, type I -0.0169554
FUS FUS RNA binding protein -0.0167575
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0164962
TMC5 transmembrane channel-like 5 -0.0164282
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0163492
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0163277
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0162551