Phenytoin (sodium)_LoVo Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Phenytoin (sodium) perturbation in LoVo cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Phenytoin (sodium)_LoVo drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.194152
FAT1 FAT atypical cadherin 1 0.169113
LOC112694756 uncharaterized LOC112694756 0.093443
SRRM2 serine/arginine repetitive matrix 2 0.0817427
RPL3 ribosomal protein L3 0.081508
THSD4 thrombospondin, type I, domain containing 4 0.0770691
MSI2 musashi RNA-binding protein 2 0.0649582
FLNB filamin B, beta 0.0649479
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0628566
PRELID2 PRELI domain containing 2 0.0607956
EPHA2 EPH receptor A2 0.0545476
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0536966
RNF213 ring finger protein 213 0.0535666
HDLBP high density lipoprotein binding protein 0.0531194
EIF4H eukaryotic translation initiation factor 4H 0.0510142
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 0.0491549
MYH9 myosin, heavy chain 9, non-muscle 0.0486622
CEMIP cell migration inducing protein, hyaluronan binding 0.0481156
ASS1 argininosuccinate synthase 1 0.0459181
MPRIP myosin phosphatase Rho interacting protein 0.0424281
MLEC malectin 0.0421221
RPL13A ribosomal protein L13a 0.0410369
EIF4B eukaryotic translation initiation factor 4B 0.0402711
NCOR2 nuclear receptor corepressor 2 0.0399708
HSPA8 heat shock 70kDa protein 8 0.038814
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0378539
BACE2 beta-site APP-cleaving enzyme 2 0.0375404
RAD51B RAD51 paralog B 0.0361384
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.035811
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0356078
AFDN afadin, adherens junction formation factor 0.0353878
CSTPP1 centriolar satellite-associated tubulin polyglutamylase complex regulator 1 0.0345313
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0345172
GMDS GDP-mannose 4,6-dehydratase 0.0336394
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0332597
ACTN4 actinin, alpha 4 0.0331955
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0330481
ANXA11 annexin A11 0.0329416
TNIP1 TNFAIP3 interacting protein 1 0.032847
KDM4B lysine (K)-specific demethylase 4B 0.0326235
PLEC plectin 0.0323794
SND1 staphylococcal nuclease and tudor domain containing 1 0.032348
MAML2 mastermind-like 2 (Drosophila) 0.0321982
TNRC18 trinucleotide repeat containing 18 0.0316175
NOS1AP nitric oxide synthase 1 (neuronal) adaptor protein 0.0304634
MYOF myoferlin 0.0304254
UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6 0.0296008
BTBD9 BTB (POZ) domain containing 9 0.0294896
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0293244
TINAGL1 tubulointerstitial nephritis antigen-like 1 0.0292457
HLA-C major histocompatibility complex, class I, C 0.0289975
PYGB phosphorylase, glycogen; brain 0.0284711
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0284314
ITGB4 integrin, beta 4 0.0281472
RACK1 receptor for activated C kinase 1 0.0277413
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0274234
NFIA nuclear factor I/A 0.0272556
DENND1A DENN/MADD domain containing 1A 0.0267463
CTBP2 C-terminal binding protein 2 0.0266847
FTH1 ferritin, heavy polypeptide 1 0.0259562
WARS1 tryptophanyl-tRNA synthetase 1 0.0259236
LMNA lamin A/C 0.0254886
RPS4X ribosomal protein S4, X-linked 0.0254605
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0251777
SMAD3 SMAD family member 3 0.0241988
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0240927
SEC31A SEC31 homolog A (S. cerevisiae) 0.023986
PTPRK protein tyrosine phosphatase, receptor type, K 0.0237063
PTEN phosphatase and tensin homolog 0.0231481
SSBP3 single stranded DNA binding protein 3 0.0229315
LAMB3 laminin, beta 3 0.0229118
CYP2S1 cytochrome P450, family 2, subfamily S, polypeptide 1 0.022402
ANXA2 annexin A2 0.0223142
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0222621
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0222015
LPP LIM domain containing preferred translocation partner in lipoma 0.0221108
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 0.0220194
PCBP2 poly(rC) binding protein 2 0.0218934
ARHGAP26 Rho GTPase activating protein 26 0.0218535
DNM2 dynamin 2 0.0217889
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0217815
NDRG1 N-myc downstream regulated 1 0.0216711
SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 0.0216061
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0216035
KIAA1671 KIAA1671 0.0212244
MON2 MON2 homolog (S. cerevisiae) 0.0212191
TLN2 talin 2 0.0211081
SURF4 surfeit 4 0.0209891
DYNC2I1 dynein 2 intermediate chain 1 0.0209711
ACTG1 actin gamma 1 0.0208118
EXOC4 exocyst complex component 4 0.0203801
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0201897
GRB10 growth factor receptor-bound protein 10 0.0201297
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 0.0199795
YBX1 Y box binding protein 1 0.0198015
GSE1 Gse1 coiled-coil protein 0.0195315
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0194863
ETNK1 ethanolamine kinase 1 0.0194329
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0194226
CDK19 cyclin-dependent kinase 19 0.0192373

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.15717
TPT1 tumor protein, translationally-controlled 1 -0.153205
LMO7 LIM domain 7 -0.133916
RPS6 ribosomal protein S6 -0.122563
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.110757
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0998283
MYO1E myosin IE -0.0984121
PTMA prothymosin, alpha -0.0841497
RPS2 ribosomal protein S2 -0.0705328
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0647237
AREG amphiregulin -0.0633917
ITPRID2 ITPR interacting domain containing 2 -0.0624554
RPLP2 ribosomal protein, large, P2 -0.0603524
RPLP1 ribosomal protein, large, P1 -0.0598692
RPS27A ribosomal protein S27a -0.0580371
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0564703
RPS23 ribosomal protein S23 -0.0557836
RPS25 ribosomal protein S25 -0.055616
RPS8 ribosomal protein S8 -0.0520905
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0496818
RPL26 ribosomal protein L26 -0.0474386
DSG2 desmoglein 2 -0.0452208
RPS24 ribosomal protein S24 -0.0447031
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0438116
FRMD5 FERM domain containing 5 -0.0430807
RPS29 ribosomal protein S29 -0.042964
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0417792
EZR ezrin -0.0394133
NAP1L1 nucleosome assembly protein 1-like 1 -0.0385865
RPS12 ribosomal protein S12 -0.0380635
RPL9 ribosomal protein L9 -0.0371397
HLA-B major histocompatibility complex, class I, B -0.0365646
RPL36A ribosomal protein L36a -0.036352
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0363198
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0358347
RPL28 ribosomal protein L28 -0.0354669
RPL32 ribosomal protein L32 -0.0347441
RPS13 ribosomal protein S13 -0.0340051
S100A10 S100 calcium binding protein A10 -0.0339675
RPL38 ribosomal protein L38 -0.0339524
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0336637
RPS15 ribosomal protein S15 -0.0333895
RPL37A ribosomal protein L37a -0.0333693
RIGI RNA sensor RIG-I -0.0333484
MUC13 mucin 13, cell surface associated -0.03246
RIMKLB ribosomal modification protein rimK-like family member B -0.0324137
IFI6 interferon, alpha-inducible protein 6 -0.0317463
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0315757
FBXO11 F-box protein 11 -0.031112
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 -0.030934
RPL31 ribosomal protein L31 -0.0309255
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.030159
RPL7A ribosomal protein L7a -0.0291341
ASPH aspartate beta-hydroxylase -0.0287695
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0283614
RPS16 ribosomal protein S16 -0.0283359
RPL8 ribosomal protein L8 -0.0279398
RPL19 ribosomal protein L19 -0.0278636
PKM pyruvate kinase, muscle -0.0274675
IER3 immediate early response 3 -0.0273574
RPS19 ribosomal protein S19 -0.0272516
SP100 SP100 nuclear antigen -0.0272101
JMJD1C jumonji domain containing 1C -0.0270825
PRSS3 protease, serine, 3 -0.0262042
KLF5 Kruppel-like factor 5 (intestinal) -0.0258447
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0257033
RPS11 ribosomal protein S11 -0.0253364
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0251489
SETD5 SET domain containing 5 -0.025014
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0248419
CCNI cyclin I -0.0246439
UBC ubiquitin C -0.024428
FUS FUS RNA binding protein -0.0243996
GPBP1 GC-rich promoter binding protein 1 -0.0243748
RAB7A RAB7A, member RAS oncogene family -0.0243704
EIF5B eukaryotic translation initiation factor 5B -0.0241303
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.023534
RNF145 ring finger protein 145 -0.023428
UGCG UDP-glucose ceramide glucosyltransferase -0.0230146
LOC102724023 ES1 protein homolog, mitochondrial -0.0227092
NKTR natural killer cell triggering receptor -0.0224408
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0222265
EREG epiregulin -0.0221231
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0220987
RAP1B RAP1B, member of RAS oncogene family -0.0220678
GCC2 GRIP and coiled-coil domain containing 2 -0.0218544
XAF1 XIAP associated factor 1 -0.0217179
CD2AP CD2-associated protein -0.0213629
NAMPT nicotinamide phosphoribosyltransferase -0.0212584
PLAUR plasminogen activator, urokinase receptor -0.0211817
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0211347
VCL vinculin -0.0210882
RPL15 ribosomal protein L15 -0.0210616
KCNK1 potassium channel, two pore domain subfamily K, member 1 -0.0209786
PERP PERP, TP53 apoptosis effector -0.0209347
LAMA4 laminin, alpha 4 -0.0208331
RAB10 RAB10, member RAS oncogene family -0.0206887
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.020685
PNRC1 proline-rich nuclear receptor coactivator 1 -0.020627
RPS5 ribosomal protein S5 -0.0205687