Phenytoin (sodium)_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Phenytoin (sodium) perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Phenytoin (sodium)_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.245319
NDRG1 N-myc downstream regulated 1 0.203287
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.141159
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.116655
PLEC plectin 0.0766806
LOC112694756 uncharaterized LOC112694756 0.0742698
EEF2 eukaryotic translation elongation factor 2 0.0692587
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0687435
ARRDC3 arrestin domain containing 3 0.0671732
HSPA8 heat shock 70kDa protein 8 0.062531
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0542634
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) 0.0523728
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0522769
RACK1 receptor for activated C kinase 1 0.048841
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0479194
FAM13A family with sequence similarity 13, member A 0.0472561
MYH9 myosin, heavy chain 9, non-muscle 0.0451244
TFG TRK-fused gene 0.0434156
GRB10 growth factor receptor-bound protein 10 0.0431333
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0427925
BHLHE40 basic helix-loop-helix family, member e40 0.0426726
FXR1 fragile X mental retardation, autosomal homolog 1 0.0417499
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0402692
HMGB2 high mobility group box 2 0.0400854
NAMPT nicotinamide phosphoribosyltransferase 0.0360321
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0354969
RPS3 ribosomal protein S3 0.0353833
EIF4H eukaryotic translation initiation factor 4H 0.0347243
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0345681
MARCHF6 membrane associated ring-CH-type finger 6 0.0343019
CALR calreticulin 0.0340724
TNIP1 TNFAIP3 interacting protein 1 0.0329767
MSMO1 methylsterol monooxygenase 1 0.0329612
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0325745
UBA6 ubiquitin-like modifier activating enzyme 6 0.0324963
HLA-C major histocompatibility complex, class I, C 0.0320847
FLNA filamin A, alpha 0.0311891
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0307753
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0301531
TSC22D2 TSC22 domain family, member 2 0.0291983
MATR3 matrin 3 0.0291559
ANXA5 annexin A5 0.0286132
RPL3 ribosomal protein L3 0.028605
YBX1 Y box binding protein 1 0.0273596
HMGA1 high mobility group AT-hook 1 0.0266484
RHOA ras homolog family member A 0.0262721
ANXA2 annexin A2 0.0255985
SLC38A1 solute carrier family 38, member 1 0.0250518
DDIT4 DNA-damage-inducible transcript 4 0.024919
G2E3 G2/M-phase specific E3 ubiquitin protein ligase 0.0247693
NUP58 nucleoporin 58 0.0245161
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0243062
VEGFA vascular endothelial growth factor A 0.0240642
RNF145 ring finger protein 145 0.0240131
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0235407
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.023373
USP3 ubiquitin specific peptidase 3 0.023148
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0225214
RAD21 RAD21 homolog (S. pombe) 0.0224289
TXNRD1 thioredoxin reductase 1 0.021876
PPP1R15B protein phosphatase 1, regulatory subunit 15B 0.0218307
AHDC1 AT hook, DNA binding motif, containing 1 0.0216971
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.0216543
FOSL1 FOS-like antigen 1 0.0216285
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0215353
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0214176
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0213801
RPL30 ribosomal protein L30 0.0212703
ECT2 epithelial cell transforming 2 0.0210591
TFRC transferrin receptor 0.0208682
TPM3 tropomyosin 3 0.0208471
RPL7 ribosomal protein L7 0.0207336
HOOK2 hook microtubule-tethering protein 2 0.0206895
AP2M1 adaptor-related protein complex 2, mu 1 subunit 0.0205739
RPL11 ribosomal protein L11 0.0205329
RSRC2 arginine/serine-rich coiled-coil 2 0.0204216
SFPQ splicing factor proline/glutamine-rich 0.0203756
PCBP2 poly(rC) binding protein 2 0.020342
MSN moesin 0.0203204
FDFT1 farnesyl-diphosphate farnesyltransferase 1 0.0201921
ELL2 elongation factor, RNA polymerase II, 2 0.0200705
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0198982
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0197708
CDC73 cell division cycle 73 0.0197672
KDM3A lysine (K)-specific demethylase 3A 0.0197602
NCKAP1 NCK-associated protein 1 0.0196652
PRRC2A proline-rich coiled-coil 2A 0.0195438
MIER1 mesoderm induction early response 1, transcriptional regulator 0.019528
RLF rearranged L-myc fusion 0.0194254
CENPF centromere protein F, 350/400kDa 0.0192898
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.019257
RPS4X ribosomal protein S4, X-linked 0.0190356
TSPAN15 tetraspanin 15 0.0189803
FTH1 ferritin, heavy polypeptide 1 0.0187227
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0184997
TAGLN2 transgelin 2 0.0182541
RPLP0 ribosomal protein, large, P0 0.0180941
NAV2 neuron navigator 2 0.0180062
PEG10 paternally expressed 10 0.0179997
ZNF292 zinc finger protein 292 0.0179754

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.212829
PTMA prothymosin, alpha -0.187567
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.187184
FTL ferritin, light polypeptide -0.159988
EXT1 exostosin glycosyltransferase 1 -0.111495
FBXO32 F-box protein 32 -0.0947249
TMSB10 thymosin beta 10 -0.0915364
SAMD4A sterile alpha motif domain containing 4A -0.0908072
LPP LIM domain containing preferred translocation partner in lipoma -0.087665
LIMCH1 LIM and calponin homology domains 1 -0.0868066
WSB1 WD repeat and SOCS box containing 1 -0.0800107
EFNA5 ephrin-A5 -0.076527
ERBIN erbb2 interacting protein -0.0684234
IFI27 interferon, alpha-inducible protein 27 -0.064607
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0641635
ZBTB20 zinc finger and BTB domain containing 20 -0.0622067
SOX4 SRY (sex determining region Y)-box 4 -0.0611151
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.059729
LMO7 LIM domain 7 -0.0596754
IFI6 interferon, alpha-inducible protein 6 -0.058248
CD2AP CD2-associated protein -0.0576992
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0558146
ARHGAP5 Rho GTPase activating protein 5 -0.0530235
TPT1 tumor protein, translationally-controlled 1 -0.0528449
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0517954
MYO6 myosin VI -0.0513926
IFI16 interferon, gamma-inducible protein 16 -0.0513254
S100A10 S100 calcium binding protein A10 -0.0497214
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.048821
HLA-B major histocompatibility complex, class I, B -0.0487378
UBE2H ubiquitin-conjugating enzyme E2H -0.047039
RNF213 ring finger protein 213 -0.046057
MAP1B microtubule-associated protein 1B -0.0458307
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0453678
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0443927
MX2 MX dynamin-like GTPase 2 -0.044274
MDK midkine (neurite growth-promoting factor 2) -0.0431533
MAP3K13 mitogen-activated protein kinase kinase kinase 13 -0.043143
RAI14 retinoic acid induced 14 -0.0414681
ALCAM activated leukocyte cell adhesion molecule -0.0414021
RBM47 RNA binding motif protein 47 -0.0404912
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0404401
TPM4 tropomyosin 4 -0.0403775
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0398262
MYO1E myosin IE -0.039782
RPS29 ribosomal protein S29 -0.0395402
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0394654
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 -0.0394441
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0394114
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0393842
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0390031
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0389382
PDLIM5 PDZ and LIM domain 5 -0.0379127
VCL vinculin -0.0377231
SEC31A SEC31 homolog A (S. cerevisiae) -0.0371438
MAP4 microtubule-associated protein 4 -0.0370711
RASAL2 RAS protein activator like 2 -0.0366022
GOLGB1 golgin B1 -0.0358101
TMEM165 transmembrane protein 165 -0.0357135
FRMD5 FERM domain containing 5 -0.0356605
MCU mitochondrial calcium uniporter -0.0354338
HSPB1 heat shock 27kDa protein 1 -0.0351767
RPS23 ribosomal protein S23 -0.0350116
ETV6 ets variant 6 -0.0349675
MAML2 mastermind-like 2 (Drosophila) -0.0348636
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0345415
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0344292
BASP1 brain abundant, membrane attached signal protein 1 -0.0344246
HLA-A major histocompatibility complex, class I, A -0.0338074
MACC1 metastasis associated in colon cancer 1 -0.0337275
EIF1 eukaryotic translation initiation factor 1 -0.0333555
PGBD5 piggyBac transposable element derived 5 -0.0330826
PATJ PATJ crumbs cell polarity complex component -0.0330201
ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3 -0.0328911
MACF1 microtubule-actin crosslinking factor 1 -0.0327355
PPP2R3A protein phosphatase 2, regulatory subunit B'', alpha -0.0326912
NIPBL Nipped-B homolog (Drosophila) -0.0325712
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0325285
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0324528
CSTB cystatin B (stefin B) -0.0322518
ATXN1 ataxin 1 -0.0319896
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0319519
NPEPPS aminopeptidase puromycin sensitive -0.0311938
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0309722
RPLP2 ribosomal protein, large, P2 -0.0307992
ARHGAP20 Rho GTPase activating protein 20 -0.0307671
CCND1 cyclin D1 -0.0306889
RIGI RNA sensor RIG-I -0.0306563
WASF2 WAS protein family, member 2 -0.0306503
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0304924
BPTF bromodomain PHD finger transcription factor -0.0299147
NF1 neurofibromin 1 -0.0298598
H1-0 H1.0 linker histone -0.0298153
KDM5B lysine (K)-specific demethylase 5B -0.02978
VIM vimentin -0.0296922
FBXL20 F-box and leucine-rich repeat protein 20 -0.0293746
TM4SF1 transmembrane 4 L six family member 1 -0.0292918
CUX1 cut-like homeobox 1 -0.0289598
AFF1 AF4/FMR2 family, member 1 -0.0289278
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0288545