Phenytoin (sodium)_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Phenytoin (sodium) perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Phenytoin (sodium)_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase 0.145993
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.12052
CXCL8 chemokine (C-X-C motif) ligand 8 0.115421
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.103427
FNDC3B fibronectin type III domain containing 3B 0.0947165
SMAD3 SMAD family member 3 0.0786118
GLIS3 GLIS family zinc finger 3 0.0736155
TRIO trio Rho guanine nucleotide exchange factor 0.0619885
AHR aryl hydrocarbon receptor 0.0605976
ITGA1 integrin, alpha 1 0.0589891
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0567109
OSMR oncostatin M receptor 0.0525638
PRELID2 PRELI domain containing 2 0.0522497
PTK2 protein tyrosine kinase 2 0.0490311
MCTP2 multiple C2 domains, transmembrane 2 0.0485348
SMOX spermine oxidase 0.0483601
FTH1 ferritin, heavy polypeptide 1 0.0472165
CENPF centromere protein F, 350/400kDa 0.0469324
FN1 fibronectin 1 0.0460645
NDRG1 N-myc downstream regulated 1 0.0453526
CLTC clathrin, heavy chain (Hc) 0.0406496
LOC112694756 uncharaterized LOC112694756 0.0405808
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0392833
SUCO SUN domain containing ossification factor 0.0392797
FAM13A family with sequence similarity 13, member A 0.0388675
FAT1 FAT atypical cadherin 1 0.0378574
SHB Src homology 2 domain containing adaptor protein B 0.0375098
PRRC2C proline-rich coiled-coil 2C 0.037198
EYA1 EYA transcriptional coactivator and phosphatase 1 0.0367243
TBC1D22A TBC1 domain family, member 22A 0.0364595
ETV6 ets variant 6 0.0356865
SEC23A Sec23 homolog A (S. cerevisiae) 0.03438
TM9SF3 transmembrane 9 superfamily member 3 0.0339143
HDLBP high density lipoprotein binding protein 0.0339072
MBD5 methyl-CpG binding domain protein 5 0.0336947
EPS8 epidermal growth factor receptor pathway substrate 8 0.0335313
ANO6 anoctamin 6 0.032787
WDR26 WD repeat domain 26 0.0326793
TNIP1 TNFAIP3 interacting protein 1 0.032551
CD44 CD44 molecule (Indian blood group) 0.0322184
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.0313754
COG5 component of oligomeric golgi complex 5 0.0306757
YEATS2 YEATS domain containing 2 0.0306233
OGA O-GlcNAcase 0.0306203
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0302957
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0302696
IL6ST interleukin 6 signal transducer 0.0300388
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.029995
RBM39 RNA binding motif protein 39 0.0294502
SMYD3 SET and MYND domain containing 3 0.029266
MKI67 marker of proliferation Ki-67 0.0292212
NAV2 neuron navigator 2 0.0291514
TPR translocated promoter region, nuclear basket protein 0.028751
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0277336
CDC73 cell division cycle 73 0.0276366
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0275252
RUNX2 runt-related transcription factor 2 0.0272704
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0270159
TMEM156 transmembrane protein 156 0.0265241
MYH9 myosin, heavy chain 9, non-muscle 0.0263358
MACF1 microtubule-actin crosslinking factor 1 0.0262623
ZC3H11A zinc finger CCCH-type containing 11A 0.025838
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0255436
DST dystonin 0.0251703
NBAS neuroblastoma amplified sequence 0.0250173
FRY furry homolog (Drosophila) 0.0250056
TLN1 talin 1 0.024996
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0247273
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 0.0244935
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.0244803
HSPA8 heat shock 70kDa protein 8 0.0243674
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0241406
NPC1 Niemann-Pick disease, type C1 0.0241012
CDCP1 CUB domain containing protein 1 0.0240996
SLTM SAFB-like, transcription modulator 0.024038
AFDN afadin, adherens junction formation factor 0.0240175
TAS2R14 taste receptor, type 2, member 14 0.0240126
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0239946
PELO pelota homolog (Drosophila) 0.0239083
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.023738
HPCAL1 hippocalcin-like 1 0.023647
IRAK3 interleukin-1 receptor-associated kinase 3 0.0235765
CTBP2 C-terminal binding protein 2 0.0235054
ATXN1 ataxin 1 0.0234846
SEC24C SEC24 family member C 0.02343
FOXO3 forkhead box O3 0.023261
TBC1D9B TBC1 domain family, member 9B (with GRAM domain) 0.0230076
MAP3K9 mitogen-activated protein kinase kinase kinase 9 0.0227878
BIRC3 baculoviral IAP repeat containing 3 0.0226794
AVL9 AVL9 homolog (S. cerevisiase) 0.022645
CD109 CD109 molecule 0.0226295
CTNND1 catenin (cadherin-associated protein), delta 1 0.0226271
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0225914
DOCK5 dedicator of cytokinesis 5 0.0225376
IDS iduronate 2-sulfatase 0.0224969
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0224862
FLNA filamin A, alpha 0.0224592
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0224456
WDR45B WD repeat domain 45B 0.0220786
ACTN4 actinin, alpha 4 0.0220368

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.219731
PTMA prothymosin, alpha -0.150169
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.128509
MT2A metallothionein 2A -0.105039
TMSB10 thymosin beta 10 -0.103155
FTL ferritin, light polypeptide -0.101366
NRG1 neuregulin 1 -0.0692116
B2M beta-2-microglobulin -0.0662557
VIM vimentin -0.0602928
HLA-B major histocompatibility complex, class I, B -0.0571456
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0527329
RPL37A ribosomal protein L37a -0.0497937
RPL35A ribosomal protein L35a -0.0475818
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0462792
INTS6 integrator complex subunit 6 -0.04441
RPS6 ribosomal protein S6 -0.0429796
TPT1 tumor protein, translationally-controlled 1 -0.0420228
LOC102724023 ES1 protein homolog, mitochondrial -0.0416969
VCL vinculin -0.0405856
RPL31 ribosomal protein L31 -0.0403731
TXNIP thioredoxin interacting protein -0.039959
RPL9 ribosomal protein L9 -0.0393153
AKAP12 A kinase (PRKA) anchor protein 12 -0.038289
RPS19 ribosomal protein S19 -0.0381438
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0362421
ASPH aspartate beta-hydroxylase -0.0361818
SOX4 SRY (sex determining region Y)-box 4 -0.0356504
RPS12 ribosomal protein S12 -0.0349267
RPS8 ribosomal protein S8 -0.0347629
RPL12 ribosomal protein L12 -0.0339874
RPL19 ribosomal protein L19 -0.0339198
RPS29 ribosomal protein S29 -0.033787
S100A10 S100 calcium binding protein A10 -0.0327716
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0320703
RPL23 ribosomal protein L23 -0.0315095
ENO2 enolase 2 (gamma, neuronal) -0.0311293
GNAS GNAS complex locus -0.0304973
SQSTM1 sequestosome 1 -0.0302465
RPS27A ribosomal protein S27a -0.0299648
IFI6 interferon, alpha-inducible protein 6 -0.0299145
RPS27 ribosomal protein S27 -0.029637
IFI27 interferon, alpha-inducible protein 27 -0.0296083
IGFBP3 insulin-like growth factor binding protein 3 -0.029593
TFPI2 tissue factor pathway inhibitor 2 -0.0294652
S100A6 S100 calcium binding protein A6 -0.0293754
MAP1B microtubule-associated protein 1B -0.0293735
ACTG1 actin gamma 1 -0.0292609
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0289037
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0285811
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0278985
RASAL2 RAS protein activator like 2 -0.0275058
EIF5B eukaryotic translation initiation factor 5B -0.0270122
EIF1 eukaryotic translation initiation factor 1 -0.026953
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0263512
HLA-A major histocompatibility complex, class I, A -0.0257397
RPL26 ribosomal protein L26 -0.0255833
RPL11 ribosomal protein L11 -0.0247087
RPS16 ribosomal protein S16 -0.0242238
SPDYA speedy/RINGO cell cycle regulator family member A -0.0238158
TPI1 triosephosphate isomerase 1 -0.0237802
BPTF bromodomain PHD finger transcription factor -0.0234559
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0234024
UBAP2 ubiquitin associated protein 2 -0.0232163
STC2 stanniocalcin 2 -0.0232013
RPS3 ribosomal protein S3 -0.0228435
S100A9 S100 calcium binding protein A9 -0.0226125
EGR1 early growth response 1 -0.0226075
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0221567
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0219646
RPL34 ribosomal protein L34 -0.0218391
RPL8 ribosomal protein L8 -0.0217899
RACK1 receptor for activated C kinase 1 -0.021785
LY6E lymphocyte antigen 6 complex, locus E -0.0217596
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0217036
MRPS6 mitochondrial ribosomal protein S6 -0.021597
RPLP2 ribosomal protein, large, P2 -0.0215658
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0213585
CST3 cystatin C -0.0213531
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0213095
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0211024
AEBP2 AE binding protein 2 -0.0208941
PALLD palladin, cytoskeletal associated protein -0.0208286
HMGA2 high mobility group AT-hook 2 -0.0208178
PLIN2 perilipin 2 -0.0206613
RPS24 ribosomal protein S24 -0.0205073
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0204342
IFITM3 interferon induced transmembrane protein 3 -0.0199871
RTN3 reticulon 3 -0.0197642
RPLP1 ribosomal protein, large, P1 -0.0196091
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0193241
JUN jun proto-oncogene -0.019154
RANBP17 RAN binding protein 17 -0.0190108
RPS23 ribosomal protein S23 -0.0189102
FERMT2 fermitin family member 2 -0.0186061
TOMM7 translocase of outer mitochondrial membrane 7 homolog (yeast) -0.0185102
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0180978
PSD3 pleckstrin and Sec7 domain containing 3 -0.0180715
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0180379
RPL37 ribosomal protein L37 -0.0179319
SLC38A2 solute carrier family 38, member 2 -0.0177928