Phenytoin (sodium)_SW48 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Phenytoin (sodium) perturbation in SW48 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Phenytoin (sodium)_SW48 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.0931236
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0777822
RNF43 ring finger protein 43 0.0738052
RUNX2 runt-related transcription factor 2 0.0719819
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0676592
RPL3 ribosomal protein L3 0.0653096
LOC112694756 uncharaterized LOC112694756 0.057602
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0560783
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0546201
TXNRD1 thioredoxin reductase 1 0.054399
FOSL1 FOS-like antigen 1 0.0540855
CD36 CD36 molecule (thrombospondin receptor) 0.0535789
SRRM2 serine/arginine repetitive matrix 2 0.0532559
LRP8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor 0.0531912
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0522697
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.051978
EGFR epidermal growth factor receptor 0.0515783
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0509597
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0490275
EPHA2 EPH receptor A2 0.0462348
EIF4H eukaryotic translation initiation factor 4H 0.0451098
OXR1 oxidation resistance 1 0.0420813
NUP58 nucleoporin 58 0.0420315
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0410291
DDIT4 DNA-damage-inducible transcript 4 0.0401045
KDM6A lysine (K)-specific demethylase 6A 0.0385392
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0379938
ANKRD11 ankyrin repeat domain 11 0.0377306
GCLC glutamate-cysteine ligase, catalytic subunit 0.0372865
WAC WW domain containing adaptor with coiled-coil 0.03692
PDE4B phosphodiesterase 4B, cAMP-specific 0.0367571
KRT18 keratin 18, type I 0.0362325
CD46 CD46 molecule, complement regulatory protein 0.03524
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.0347723
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0340688
NIBAN2 niban apoptosis regulator 2 0.0340401
IGFBP3 insulin-like growth factor binding protein 3 0.0340055
FAT1 FAT atypical cadherin 1 0.0325637
ANXA11 annexin A11 0.0318408
BAMBI BMP and activin membrane-bound inhibitor 0.0313053
FTH1 ferritin, heavy polypeptide 1 0.030992
WDR45B WD repeat domain 45B 0.0309045
ERRFI1 ERBB receptor feedback inhibitor 1 0.0306654
RNF145 ring finger protein 145 0.0306046
GDF15 growth differentiation factor 15 0.0305782
HILPDA hypoxia inducible lipid droplet-associated 0.0304377
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 0.0304055
TPM4 tropomyosin 4 0.0302832
EWSR1 EWS RNA-binding protein 1 0.029545
NCOR2 nuclear receptor corepressor 2 0.0295275
RAB6A RAB6A, member RAS oncogene family 0.0294147
AP2M1 adaptor-related protein complex 2, mu 1 subunit 0.0292184
MIDEAS mitotic deacetylase associated SANT domain protein 0.0290007
RPS23 ribosomal protein S23 0.0289913
BIRC3 baculoviral IAP repeat containing 3 0.0282767
HSPA8 heat shock 70kDa protein 8 0.0279956
EDAR ectodysplasin A receptor 0.0275264
PRPF8 pre-mRNA processing factor 8 0.0275123
PLEC plectin 0.0275113
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) 0.0273183
WDR43 WD repeat domain 43 0.0272506
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0270637
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0268733
FAF2 Fas associated factor family member 2 0.0264219
LAMC2 laminin, gamma 2 0.0260643
USP3 ubiquitin specific peptidase 3 0.0259644
FAR1 fatty acyl CoA reductase 1 0.0257578
NFIA nuclear factor I/A 0.0257273
CTSB cathepsin B 0.025664
MACROH2A1 macroH2A.1 histone 0.0256558
LGALS3 lectin, galactoside-binding, soluble, 3 0.0256182
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0253768
AXIN2 axin 2 0.0252218
NT5DC3 5'-nucleotidase domain containing 3 0.0252176
ARRDC3 arrestin domain containing 3 0.0252162
CAPRIN1 cell cycle associated protein 1 0.0251043
CABIN1 calcineurin binding protein 1 0.0248262
RNASEH2A ribonuclease H2, subunit A 0.0247977
C6ORF132 chromosome 6 open reading frame 132 0.0247634
ESYT2 extended synaptotagmin-like protein 2 0.024607
HLA-A major histocompatibility complex, class I, A 0.0243217
ATP11B ATPase, class VI, type 11B 0.0241284
GARS1 glycyl-tRNA synthetase 1 0.0239775
EGR1 early growth response 1 0.0238955
YEATS2 YEATS domain containing 2 0.0238778
SMG7 SMG7 nonsense mediated mRNA decay factor 0.0234776
CHD1 chromodomain helicase DNA binding protein 1 0.0232578
RPL30 ribosomal protein L30 0.0232486
UBE3C ubiquitin protein ligase E3C 0.0231964
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0231761
CTBP2 C-terminal binding protein 2 0.0231359
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.0226369
MED13 mediator complex subunit 13 0.0224264
PRRC2B proline-rich coiled-coil 2B 0.0220799
ACTN4 actinin, alpha 4 0.0217781
FYN FYN proto-oncogene, Src family tyrosine kinase 0.0217741
JMY junction mediating and regulatory protein, p53 cofactor 0.0216899
SREBF2 sterol regulatory element binding transcription factor 2 0.0212993
NUP153 nucleoporin 153kDa 0.0211381
TPD52L1 tumor protein D52-like 1 0.0210469

decreased expression

Symbol Name Standardized Value
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.155585
PTMA prothymosin, alpha -0.134916
TMSB10 thymosin beta 10 -0.131489
RAD51B RAD51 paralog B -0.109943
IER3 immediate early response 3 -0.101068
HMGA2 high mobility group AT-hook 2 -0.100656
RPS27A ribosomal protein S27a -0.0986804
FHIT fragile histidine triad -0.0967024
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0845713
AHNAK AHNAK nucleoprotein -0.0842902
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0788783
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0755892
CANX calnexin -0.0736917
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0732936
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0722986
LAMA4 laminin, alpha 4 -0.0698589
CCSER1 coiled-coil serine-rich protein 1 -0.0684492
EMP1 epithelial membrane protein 1 -0.0681514
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0629588
VCL vinculin -0.0625942
EXOC4 exocyst complex component 4 -0.0586877
RBM25 RNA binding motif protein 25 -0.0556918
LAMB3 laminin, beta 3 -0.0541799
RPS24 ribosomal protein S24 -0.052262
RCOR1 REST corepressor 1 -0.0520372
UBC ubiquitin C -0.0518849
HDAC2 histone deacetylase 2 -0.0508538
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0496292
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0492274
ENO1 enolase 1, (alpha) -0.0481972
PHF14 PHD finger protein 14 -0.0481186
RPL23 ribosomal protein L23 -0.0477569
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0435582
EHBP1 EH domain binding protein 1 -0.0435122
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0431526
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0423735
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0417639
RPS3 ribosomal protein S3 -0.0404934
MT1X metallothionein 1X -0.040473
GPHN gephyrin -0.0404373
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0404301
ANKRD17 ankyrin repeat domain 17 -0.0393872
VMP1 vacuole membrane protein 1 -0.0393309
RPL5 ribosomal protein L5 -0.0392368
EXT1 exostosin glycosyltransferase 1 -0.0387001
ACTG1 actin gamma 1 -0.0386715
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0385851
AKAP12 A kinase (PRKA) anchor protein 12 -0.03658
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0362929
S100A10 S100 calcium binding protein A10 -0.0362617
ATXN1 ataxin 1 -0.0360563
DOCK5 dedicator of cytokinesis 5 -0.0357278
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.035515
MT2A metallothionein 2A -0.0354246
CUX1 cut-like homeobox 1 -0.0344459
ASPH aspartate beta-hydroxylase -0.0341937
WSB1 WD repeat and SOCS box containing 1 -0.03367
PRELID2 PRELI domain containing 2 -0.0330562
CDK13 cyclin-dependent kinase 13 -0.0324723
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0324056
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0323062
ABR active BCR-related -0.0316015
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0311734
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0308691
EFNB2 ephrin-B2 -0.0308641
FBXL17 F-box and leucine-rich repeat protein 17 -0.0298426
SENP5 SUMO1/sentrin specific peptidase 5 -0.0296634
SET SET nuclear proto-oncogene -0.0294832
RPL34 ribosomal protein L34 -0.0294404
FOXN3 forkhead box N3 -0.0289832
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0288918
KITLG KIT ligand -0.0288702
RPL26 ribosomal protein L26 -0.0288367
DIAPH2 diaphanous-related formin 2 -0.0287821
SGMS2 sphingomyelin synthase 2 -0.0285991
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0279642
CEP128 centrosomal protein 128kDa -0.0279273
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) -0.0278337
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0277599
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0276684
DLG1 discs, large homolog 1 (Drosophila) -0.0276119
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0274529
GLCCI1 glucocorticoid induced 1 -0.0271829
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.0270626
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0270366
SCLT1 sodium channel and clathrin linker 1 -0.0266605
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.0265582
SMYD3 SET and MYND domain containing 3 -0.0264845
EIF3A eukaryotic translation initiation factor 3, subunit A -0.026467
FRAS1 Fraser extracellular matrix complex subunit 1 -0.0264475
PTPRG protein tyrosine phosphatase, receptor type, G -0.0263496
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0262736
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0260818
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0259983
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0258971
SDC4 syndecan 4 -0.0258469
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough -0.0257048
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0255829
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0253162
GLG1 golgi glycoprotein 1 -0.0252454