Phenytoin (sodium)_SW480 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Phenytoin (sodium) perturbation in SW480 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Phenytoin (sodium)_SW480 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NKD1 naked cuticle homolog 1 (Drosophila) 0.175713
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.108072
EEF2 eukaryotic translation elongation factor 2 0.106958
RUNX1 runt-related transcription factor 1 0.0939668
PLEC plectin 0.0908392
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0873481
LOC112694756 uncharaterized LOC112694756 0.0790326
FYN FYN proto-oncogene, Src family tyrosine kinase 0.0773622
HDAC4 histone deacetylase 4 0.0743924
PGK1 phosphoglycerate kinase 1 0.0741371
KRT18 keratin 18, type I 0.0733531
ABHD2 abhydrolase domain containing 2 0.072653
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0715907
CEMIP2 cell migration inducing hyaluronidase 2 0.0694765
ATXN1 ataxin 1 0.0669927
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0667451
ESYT2 extended synaptotagmin-like protein 2 0.0654937
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0643789
PROX1 prospero homeobox 1 0.0637278
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0624506
KIZ kizuna centrosomal protein 0.0620737
ETNK1 ethanolamine kinase 1 0.0582954
CD46 CD46 molecule, complement regulatory protein 0.0572381
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0563163
AOPEP aminopeptidase O (putative) 0.0561836
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0557247
ACTN4 actinin, alpha 4 0.0556652
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0550039
LMO7 LIM domain 7 0.0547736
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0545589
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0543534
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0537981
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0533674
ENO1 enolase 1, (alpha) 0.0523789
MYH9 myosin, heavy chain 9, non-muscle 0.0523481
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0519134
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0511063
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.050881
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0504779
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0504604
ZNF292 zinc finger protein 292 0.0502849
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0495148
DSPP dentin sialophosphoprotein 0.0491677
TBC1D22A TBC1 domain family, member 22A 0.0490321
TNS3 tensin 3 0.0489026
WDFY2 WD repeat and FYVE domain containing 2 0.0477868
SBF2 SET binding factor 2 0.0467421
SRRM2 serine/arginine repetitive matrix 2 0.0463013
EFNB2 ephrin-B2 0.0462313
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0460488
DST dystonin 0.0455672
VGLL4 vestigial-like family member 4 0.0454874
CMIP c-Maf inducing protein 0.0439366
AFDN afadin, adherens junction formation factor 0.0434445
MAML2 mastermind-like 2 (Drosophila) 0.0428792
MACF1 microtubule-actin crosslinking factor 1 0.0428486
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 0.042026
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0420054
ANLN anillin, actin binding protein 0.0409809
AVL9 AVL9 homolog (S. cerevisiase) 0.0409348
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0408101
EIF4B eukaryotic translation initiation factor 4B 0.0407804
SEC31A SEC31 homolog A (S. cerevisiae) 0.0395068
ANXA2 annexin A2 0.0394687
PRRC2C proline-rich coiled-coil 2C 0.0390157
ANK3 ankyrin 3, node of Ranvier (ankyrin G) 0.0389471
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0387314
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0385324
PRPF8 pre-mRNA processing factor 8 0.0383299
TTC3 tetratricopeptide repeat domain 3 0.0382811
RBM39 RNA binding motif protein 39 0.0382626
SVIL supervillin 0.0382505
CEMIP cell migration inducing protein, hyaluronan binding 0.0379728
NF1 neurofibromin 1 0.037968
UTRN utrophin 0.037856
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0377901
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0376603
RPL3 ribosomal protein L3 0.037055
RBM26 RNA binding motif protein 26 0.0369743
KMT2C lysine (K)-specific methyltransferase 2C 0.0369337
USP9X ubiquitin specific peptidase 9, X-linked 0.0368913
FLNA filamin A, alpha 0.0368698
NONO non-POU domain containing, octamer-binding 0.0365328
PTEN phosphatase and tensin homolog 0.0364378
CLTC clathrin, heavy chain (Hc) 0.0360099
DIAPH3 diaphanous-related formin 3 0.0360013
BRWD3 bromodomain and WD repeat domain containing 3 0.0358202
MACC1 metastasis associated in colon cancer 1 0.0356894
PCBP2 poly(rC) binding protein 2 0.0355779
HSPA8 heat shock 70kDa protein 8 0.0353733
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0349753
YEATS2 YEATS domain containing 2 0.0348703
CANX calnexin 0.0348187
TRIO trio Rho guanine nucleotide exchange factor 0.0346918
YAP1 Yes-associated protein 1 0.0345381
EIF4H eukaryotic translation initiation factor 4H 0.0344252
PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit 0.0339279
TMEM123 transmembrane protein 123 0.0338622
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.03372
BIRC6 baculoviral IAP repeat containing 6 0.0336141

decreased expression

Symbol Name Standardized Value
VCL vinculin -0.110787
PTMA prothymosin, alpha -0.099803
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.091962
INTS6 integrator complex subunit 6 -0.0906594
SDK1 sidekick cell adhesion molecule 1 -0.0802299
TMSB10 thymosin beta 10 -0.0791501
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0759516
TPT1 tumor protein, translationally-controlled 1 -0.0673647
CCND1 cyclin D1 -0.0598743
CDH13 cadherin 13 -0.0478432
RPL35A ribosomal protein L35a -0.0475436
LOC102724023 ES1 protein homolog, mitochondrial -0.0471816
MRPS6 mitochondrial ribosomal protein S6 -0.0452649
ASPH aspartate beta-hydroxylase -0.0326593
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) -0.0323829
FRMD5 FERM domain containing 5 -0.0313474
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0304638
ANO1 anoctamin 1, calcium activated chloride channel -0.0295009
UBAP2 ubiquitin associated protein 2 -0.0284266
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0278079
RPS24 ribosomal protein S24 -0.0276495
FTL ferritin, light polypeptide -0.0271639
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.026957
MT2A metallothionein 2A -0.0268742
CDK13 cyclin-dependent kinase 13 -0.0267941
RPL23 ribosomal protein L23 -0.0263612
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0260282
RBP1 retinol binding protein 1, cellular -0.0257167
DOCK9 dedicator of cytokinesis 9 -0.0255649
CUX1 cut-like homeobox 1 -0.0251597
NOP56 NOP56 ribonucleoprotein -0.0250039
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0248109
PDLIM5 PDZ and LIM domain 5 -0.0245008
ADGRL2 adhesion G protein-coupled receptor L2 -0.0231072
NPAS2 neuronal PAS domain protein 2 -0.0228826
CD44 CD44 molecule (Indian blood group) -0.0219267
SNTB2 syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2) -0.0216866
RPL9 ribosomal protein L9 -0.0212604
ANXA3 annexin A3 -0.0209017
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0207742
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0203417
EGR1 early growth response 1 -0.0202087
IGF2 insulin-like growth factor 2 -0.0202038
CCNL1 cyclin L1 -0.0201673
FHIT fragile histidine triad -0.0200364
RIMS2 regulating synaptic membrane exocytosis 2 -0.019796
PCDH9 protocadherin 9 -0.0197401
LRMDA leucine rich melanocyte differentiation associated -0.0197159
RPS27A ribosomal protein S27a -0.0192568
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0191217
SKAP1 src kinase associated phosphoprotein 1 -0.0188971
RALY RALY heterogeneous nuclear ribonucleoprotein -0.018646
NABP1 nucleic acid binding protein 1 -0.0185633
BICD1 bicaudal D homolog 1 (Drosophila) -0.0181537
PUM3 pumilio RNA binding family member 3 -0.0178288
CLSTN2 calsyntenin 2 -0.0178025
COMMD10 COMM domain containing 10 -0.0177857
IER3 immediate early response 3 -0.0173635
MTAP methylthioadenosine phosphorylase -0.0171628
DUSP6 dual specificity phosphatase 6 -0.0170175
WDR43 WD repeat domain 43 -0.0169646
NLK nemo-like kinase -0.0166655
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0165948
GMDS GDP-mannose 4,6-dehydratase -0.0165441
ZNF704 zinc finger protein 704 -0.0165414
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0165108
MT1X metallothionein 1X -0.0164374
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0164059
RPS25 ribosomal protein S25 -0.0163657
TGFB1 transforming growth factor, beta 1 -0.0163606
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.0160785
TBC1D4 TBC1 domain family, member 4 -0.0159343
RAB10 RAB10, member RAS oncogene family -0.0155213
FUS FUS RNA binding protein -0.0154973
RPL37A ribosomal protein L37a -0.0154945
BACE2 beta-site APP-cleaving enzyme 2 -0.0154392
PTPRG protein tyrosine phosphatase, receptor type, G -0.0152726
YBX3 Y box binding protein 3 -0.0152112
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0150547
PUS7 pseudouridylate synthase 7 (putative) -0.0148375
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0147481
GTF2IRD1 GTF2I repeat domain containing 1 -0.0147372
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) -0.0147312
BCAR3 breast cancer anti-estrogen resistance 3 -0.0146116
RCC1 regulator of chromosome condensation 1 -0.0145861
PRH1 proline-rich protein HaeIII subfamily 1 -0.0145041
ZFPM2 zinc finger protein, FOG family member 2 -0.0144405
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 -0.0144139
RCOR1 REST corepressor 1 -0.0144053
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0143916
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0143413
CCDC138 coiled-coil domain containing 138 -0.0141453
MYO1D myosin ID -0.0140725
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8 -0.0140587
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0140378
RPS11 ribosomal protein S11 -0.0139031
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0138855
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0138078
E2F3 E2F transcription factor 3 -0.0137672
TYW1B tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae) -0.0137294