Phenytoin (sodium)_hTERT-HPNE Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Phenytoin (sodium) perturbation in hTERT-HPNE cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Phenytoin (sodium)_hTERT-HPNE drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.233903
STC1 stanniocalcin 1 0.14512
MYH9 myosin, heavy chain 9, non-muscle 0.114706
FAM13A family with sequence similarity 13, member A 0.11466
COL6A3 collagen, type VI, alpha 3 0.0976203
ARHGAP21 Rho GTPase activating protein 21 0.0898507
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0887262
NDRG1 N-myc downstream regulated 1 0.0851126
ATP13A3 ATPase type 13A3 0.0643465
LOC112694756 uncharaterized LOC112694756 0.0642409
EEF2 eukaryotic translation elongation factor 2 0.0611913
ANXA2 annexin A2 0.0600765
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0591239
MMP1 matrix metallopeptidase 1 0.0555505
SOD2 superoxide dismutase 2, mitochondrial 0.0541862
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0541803
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.054023
ADM adrenomedullin 0.0522334
TM4SF1 transmembrane 4 L six family member 1 0.0513984
HLA-C major histocompatibility complex, class I, C 0.0495999
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0491141
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.046067
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0458736
HDLBP high density lipoprotein binding protein 0.0437803
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0428126
FMNL2 formin-like 2 0.0397088
COL4A2 collagen, type IV, alpha 2 0.0386123
JARID2 jumonji, AT rich interactive domain 2 0.038344
GOLGA4 golgin A4 0.0381068
BHLHE40 basic helix-loop-helix family, member e40 0.0379601
FLNA filamin A, alpha 0.0373923
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0361802
HSPA8 heat shock 70kDa protein 8 0.0349416
WDR45B WD repeat domain 45B 0.034055
PDE8A phosphodiesterase 8A 0.0338934
RPL3 ribosomal protein L3 0.0333876
RASA2 RAS p21 protein activator 2 0.0326578
ELL2 elongation factor, RNA polymerase II, 2 0.0325715
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0316804
KDM3A lysine (K)-specific demethylase 3A 0.0315462
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 0.0312952
LOXL2 lysyl oxidase-like 2 0.0310356
CLINT1 clathrin interactor 1 0.0307723
VIM vimentin 0.030772
HELZ helicase with zinc finger 0.0304063
ANXA5 annexin A5 0.0302918
USP3 ubiquitin specific peptidase 3 0.0300367
FGFR1 fibroblast growth factor receptor 1 0.0298298
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0297715
TRPC4 transient receptor potential cation channel, subfamily C, member 4 0.0290928
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0282728
TNS1 tensin 1 0.0281278
SEC24D SEC24 family member D 0.0280761
RPS3 ribosomal protein S3 0.0280453
CALR calreticulin 0.027807
FYN FYN proto-oncogene, Src family tyrosine kinase 0.0274851
PGM3 phosphoglucomutase 3 0.0273454
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0270847
YBX1 Y box binding protein 1 0.0267521
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0264546
NGLY1 N-glycanase 1 0.0263818
RNF145 ring finger protein 145 0.0262557
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0262367
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0259928
ARRDC3 arrestin domain containing 3 0.0258366
HILPDA hypoxia inducible lipid droplet-associated 0.0257962
ADAM9 ADAM metallopeptidase domain 9 0.02542
TPM3 tropomyosin 3 0.025246
MXI1 MAX interactor 1, dimerization protein 0.0244545
APAF1 apoptotic peptidase activating factor 1 0.0244538
SPAG9 sperm associated antigen 9 0.024388
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0242769
TMSB4X thymosin beta 4, X-linked 0.024107
MSI2 musashi RNA-binding protein 2 0.0237903
RACK1 receptor for activated C kinase 1 0.0233193
AMPD3 adenosine monophosphate deaminase 3 0.0231391
ZEB1 zinc finger E-box binding homeobox 1 0.0229994
CDPF1 cysteine-rich, DPF motif domain containing 1 0.0227167
RAB6A RAB6A, member RAS oncogene family 0.0223859
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0223042
SEPTIN9 septin 9 0.0221016
TTC3 tetratricopeptide repeat domain 3 0.0220221
TBC1D23 TBC1 domain family, member 23 0.0219378
RPL34 ribosomal protein L34 0.021937
CDC27 cell division cycle 27 0.0217948
LMNA lamin A/C 0.0216756
DDIT4 DNA-damage-inducible transcript 4 0.0215034
RRBP1 ribosome binding protein 1 0.021403
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0212134
MEIS1 Meis homeobox 1 0.0211752
BZW1 basic leucine zipper and W2 domains 1 0.0207553
RPL4 ribosomal protein L4 0.0207424
CUL3 cullin 3 0.0205689
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0205215
LDHA lactate dehydrogenase A 0.0204382
FAT1 FAT atypical cadherin 1 0.0202734
COL4A1 collagen, type IV, alpha 1 0.0201869
EIF4H eukaryotic translation initiation factor 4H 0.0201452
NUP58 nucleoporin 58 0.0200577
PLEC plectin 0.020015

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.256969
NALF1 NALCN channel auxiliary factor 1 -0.134953
PRKG1 protein kinase, cGMP-dependent, type I -0.0936568
MT2A metallothionein 2A -0.0801844
HLA-B major histocompatibility complex, class I, B -0.0755433
COL1A1 collagen, type I, alpha 1 -0.0721964
ASPH aspartate beta-hydroxylase -0.0632615
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0594083
ADGRB3 adhesion G protein-coupled receptor B3 -0.0525478
TMSB10 thymosin beta 10 -0.0504162
HMGA2 high mobility group AT-hook 2 -0.0462004
ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 -0.0460083
FTL ferritin, light polypeptide -0.0454412
EXT1 exostosin glycosyltransferase 1 -0.0445861
VCL vinculin -0.0435157
TIMP1 TIMP metallopeptidase inhibitor 1 -0.041287
CDH13 cadherin 13 -0.0406916
MYO10 myosin X -0.0402651
COL1A2 collagen, type I, alpha 2 -0.0396475
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0395986
FER fer (fps/fes related) tyrosine kinase -0.0395856
TPT1 tumor protein, translationally-controlled 1 -0.0392823
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0381223
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0375963
FRMD4A FERM domain containing 4A -0.0373094
DIAPH2 diaphanous-related formin 2 -0.0364943
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0357661
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0355067
INTS6 integrator complex subunit 6 -0.034691
AKAP12 A kinase (PRKA) anchor protein 12 -0.0346862
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0341526
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0334258
ZBTB20 zinc finger and BTB domain containing 20 -0.0331339
B2M beta-2-microglobulin -0.0316888
OXR1 oxidation resistance 1 -0.0312752
RPS19 ribosomal protein S19 -0.0306734
RPS6 ribosomal protein S6 -0.0305531
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0300028
LPP LIM domain containing preferred translocation partner in lipoma -0.0282951
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0281942
KIAA1549L KIAA1549-like -0.0270611
PDLIM5 PDZ and LIM domain 5 -0.0266226
PRRX1 paired related homeobox 1 -0.0264136
SPRED2 sprouty-related, EVH1 domain containing 2 -0.025657
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0253656
RIGI RNA sensor RIG-I -0.0252935
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0251301
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0244061
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.024211
CDK6 cyclin-dependent kinase 6 -0.0240226
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0239084
MED13L mediator complex subunit 13-like -0.0238713
EFCAB13 EF-hand calcium binding domain 13 -0.023643
GLIS3 GLIS family zinc finger 3 -0.0234572
AHNAK AHNAK nucleoprotein -0.0227103
RPS23 ribosomal protein S23 -0.022508
JMJD1C jumonji domain containing 1C -0.0224285
NBEAL1 neurobeachin-like 1 -0.0223352
RPLP2 ribosomal protein, large, P2 -0.0222591
BPTF bromodomain PHD finger transcription factor -0.021935
FUS FUS RNA binding protein -0.0218075
TGFBI transforming growth factor, beta-induced, 68kDa -0.0216318
TAOK3 TAO kinase 3 -0.0213077
KLF12 Kruppel-like factor 12 -0.0211669
IFIH1 interferon induced with helicase C domain 1 -0.0208796
NABP1 nucleic acid binding protein 1 -0.0208684
STARD13 StAR-related lipid transfer (START) domain containing 13 -0.0205296
RAD51B RAD51 paralog B -0.0204605
CCL5 chemokine (C-C motif) ligand 5 -0.0202971
EMP1 epithelial membrane protein 1 -0.0202805
RPS15 ribosomal protein S15 -0.020239
FGF5 fibroblast growth factor 5 -0.0201093
S100A10 S100 calcium binding protein A10 -0.0199969
YAP1 Yes-associated protein 1 -0.0199867
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0195834
RBBP6 retinoblastoma binding protein 6 -0.0195277
COL3A1 collagen, type III, alpha 1 -0.0195237
EXOC4 exocyst complex component 4 -0.0194912
PDE4D phosphodiesterase 4D, cAMP-specific -0.0194412
IPO9 importin 9 -0.0190455
SNX14 sorting nexin 14 -0.0189671
RPL31 ribosomal protein L31 -0.0188408
PDE4B phosphodiesterase 4B, cAMP-specific -0.0187892
PSD3 pleckstrin and Sec7 domain containing 3 -0.0187104
SLC38A2 solute carrier family 38, member 2 -0.018709
IL6 interleukin 6 -0.0186859
CCDC102B coiled-coil domain containing 102B -0.0186753
SASH1 SAM and SH3 domain containing 1 -0.0185242
CUX1 cut-like homeobox 1 -0.0184038
CD44 CD44 molecule (Indian blood group) -0.0183987
ABI3BP ABI family, member 3 (NESH) binding protein -0.0183386
ITGA1 integrin, alpha 1 -0.018329
MYO1D myosin ID -0.0181198
ANKRD12 ankyrin repeat domain 12 -0.0177368
DPYD dihydropyrimidine dehydrogenase -0.0175346
RPL28 ribosomal protein L28 -0.0173539
RPLP1 ribosomal protein, large, P1 -0.0172607
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0172106
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0171783
VCAN versican -0.0171273