Pimitespib_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pimitespib perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pimitespib_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VCL vinculin 0.214553
TLE4 transducin-like enhancer of split 4 0.118525
ZSWIM6 zinc finger, SWIM-type containing 6 0.117594
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.0929722
FMN1 formin 1 0.0907877
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0702206
EGR1 early growth response 1 0.0572823
EXT1 exostosin glycosyltransferase 1 0.0543841
GLCCI1 glucocorticoid induced 1 0.0543543
FAM107B family with sequence similarity 107, member B 0.0525533
SLIT2 slit homolog 2 (Drosophila) 0.0511178
PSD3 pleckstrin and Sec7 domain containing 3 0.0493154
DSCAM Down syndrome cell adhesion molecule 0.0476461
RPL23 ribosomal protein L23 0.0462931
TPM1 tropomyosin 1 (alpha) 0.0460408
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.044907
CENPF centromere protein F, 350/400kDa 0.0434684
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0434582
AFF4 AF4/FMR2 family, member 4 0.0431831
TIMP3 TIMP metallopeptidase inhibitor 3 0.0422783
INTS6 integrator complex subunit 6 0.04218
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0419496
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0415479
STK38L serine/threonine kinase 38 like 0.0408037
PNRC1 proline-rich nuclear receptor coactivator 1 0.0402465
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0400352
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0399172
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0398664
THBS1 thrombospondin 1 0.0388654
COL4A1 collagen, type IV, alpha 1 0.0387482
PACS1 phosphofurin acidic cluster sorting protein 1 0.0379281
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0371242
JARID2 jumonji, AT rich interactive domain 2 0.0370459
SLITRK6 SLIT and NTRK-like family, member 6 0.036928
TPST1 tyrosylprotein sulfotransferase 1 0.0360903
ZBTB20 zinc finger and BTB domain containing 20 0.0358676
MYO1E myosin IE 0.0358319
GPBP1 GC-rich promoter binding protein 1 0.0356004
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0355814
RPL7 ribosomal protein L7 0.0352444
PCDH7 protocadherin 7 0.03469
ITPRID2 ITPR interacting domain containing 2 0.0344764
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0337423
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 0.0334652
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0330304
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0329628
FNDC3A fibronectin type III domain containing 3A 0.0328795
CTNND1 catenin (cadherin-associated protein), delta 1 0.0320121
HOMER1 homer scaffolding protein 1 0.0316878
B2M beta-2-microglobulin 0.03148
ANKRD12 ankyrin repeat domain 12 0.0312884
SIK3 SIK family kinase 3 0.0312791
NPAS2 neuronal PAS domain protein 2 0.0310118
CALD1 caldesmon 1 0.0306569
LOC102724023 ES1 protein homolog, mitochondrial 0.030573
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0303533
NFE2L2 nuclear factor, erythroid 2-like 2 0.0296786
FERMT2 fermitin family member 2 0.029062
BRD2 bromodomain containing 2 0.0288719
PDE10A phosphodiesterase 10A 0.0283125
SIK2 salt-inducible kinase 2 0.0281175
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0280469
FER fer (fps/fes related) tyrosine kinase 0.0278119
LMNA lamin A/C 0.027794
DIPK2A divergent protein kinase domain 2A 0.0277231
EIF1 eukaryotic translation initiation factor 1 0.0270601
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0268781
TIMP2 TIMP metallopeptidase inhibitor 2 0.0265533
PELO pelota homolog (Drosophila) 0.0263924
PDLIM5 PDZ and LIM domain 5 0.0260504
PEAK1 pseudopodium-enriched atypical kinase 1 0.0260458
DST dystonin 0.0259527
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0258256
SENP6 SUMO1/sentrin specific peptidase 6 0.0256285
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.0255223
NCOA7 nuclear receptor coactivator 7 0.0254585
PPP1R12B protein phosphatase 1, regulatory subunit 12B 0.025424
CEMIP2 cell migration inducing hyaluronidase 2 0.0247766
PTPRE protein tyrosine phosphatase, receptor type, E 0.0246164
OXSR1 oxidative stress responsive 1 0.0245683
ARHGAP24 Rho GTPase activating protein 24 0.0245646
PDIA6 protein disulfide isomerase family A, member 6 0.0245353
RPS20 ribosomal protein S20 0.0241407
ATP5F1B ATP synthase F1 subunit beta 0.0239711
BPTF bromodomain PHD finger transcription factor 0.0236189
RBM33 RNA binding motif protein 33 0.0235611
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0234038
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0233081
NSUN6 NOP2/Sun domain family, member 6 0.0227757
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 0.0227487
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.0226533
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0225542
SEPTIN7 septin 7 0.022446
LPP LIM domain containing preferred translocation partner in lipoma 0.0223827
MAP3K1 mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase 0.0223256
FOXO3 forkhead box O3 0.0223212
THSD4 thrombospondin, type I, domain containing 4 0.0222741
NFE2L1 nuclear factor, erythroid 2-like 1 0.022224
AKAP9 A kinase (PRKA) anchor protein 9 0.0219979
UHMK1 U2AF homology motif (UHM) kinase 1 0.0219531

decreased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.253479
IGF2 insulin-like growth factor 2 -0.207221
NRG1 neuregulin 1 -0.147105
PTMA prothymosin, alpha -0.0654431
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0621282
LPIN1 lipin 1 -0.0596764
USP34 ubiquitin specific peptidase 34 -0.0505424
KPNB1 karyopherin (importin) beta 1 -0.0429197
RPTOR regulatory associated protein of MTOR, complex 1 -0.0423001
TRIO trio Rho guanine nucleotide exchange factor -0.0413544
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.041034
AOPEP aminopeptidase O (putative) -0.0393153
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0392981
CEP95 centrosomal protein 95kDa -0.0390641
RPL26 ribosomal protein L26 -0.0387523
GNAS GNAS complex locus -0.0382738
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0380261
USP3 ubiquitin specific peptidase 3 -0.0359089
CCND1 cyclin D1 -0.0357181
SPAG9 sperm associated antigen 9 -0.035538
RPS6 ribosomal protein S6 -0.0348
TRIB2 tribbles pseudokinase 2 -0.0346873
VIM vimentin -0.0346061
BICD1 bicaudal D homolog 1 (Drosophila) -0.0340554
DNAH14 dynein, axonemal, heavy chain 14 -0.0339611
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0329962
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0328647
JMJD1C jumonji domain containing 1C -0.0325169
LDHB lactate dehydrogenase B -0.0325165
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0323904
WSB1 WD repeat and SOCS box containing 1 -0.0322314
DLC1 DLC1 Rho GTPase activating protein -0.0318097
TPT1 tumor protein, translationally-controlled 1 -0.0317541
HILPDA hypoxia inducible lipid droplet-associated -0.031427
NREP neuronal regeneration related protein -0.0312937
FHIT fragile histidine triad -0.0312202
MATR3 matrin 3 -0.0311816
RBM26 RNA binding motif protein 26 -0.030967
TM9SF3 transmembrane 9 superfamily member 3 -0.0307758
ANKRD11 ankyrin repeat domain 11 -0.0300296
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0298862
CADM2 cell adhesion molecule 2 -0.0295779
WDR45B WD repeat domain 45B -0.0295369
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.02896
LMAN1 lectin, mannose-binding, 1 -0.0289489
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0281544
CSDE1 cold shock domain containing E1, RNA-binding -0.0280206
RPS17 ribosomal protein S17 -0.0278755
MSI2 musashi RNA-binding protein 2 -0.0278019
AKAP13 A kinase (PRKA) anchor protein 13 -0.0274635
PARD3 par-3 family cell polarity regulator -0.0274539
CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 -0.027453
RPS16 ribosomal protein S16 -0.0274285
MIB1 mindbomb E3 ubiquitin protein ligase 1 -0.0274262
TTC3 tetratricopeptide repeat domain 3 -0.0272155
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0270307
DYM dymeclin -0.027014
TMSB10 thymosin beta 10 -0.0269806
NALF1 NALCN channel auxiliary factor 1 -0.0267258
ASPH aspartate beta-hydroxylase -0.0266315
FNBP4 formin binding protein 4 -0.0266314
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0266045
KTN1 kinectin 1 (kinesin receptor) -0.0264341
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0264138
ZC3H15 zinc finger CCCH-type containing 15 -0.0264074
FOXK2 forkhead box K2 -0.0260575
SCG2 secretogranin II -0.0260278
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0254633
NAP1L1 nucleosome assembly protein 1-like 1 -0.0252819
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) -0.0251173
PUM2 pumilio RNA-binding family member 2 -0.0249758
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0246181
ANGPT1 angiopoietin 1 -0.0245623
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0240851
PDCD6IP programmed cell death 6 interacting protein -0.0240508
TENM3 teneurin transmembrane protein 3 -0.0239791
AFDN afadin, adherens junction formation factor -0.0239753
TCERG1 transcription elongation regulator 1 -0.0238955
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) -0.0238577
FKBP1A FK506 binding protein 1A, 12kDa -0.0238077
GRIK5 glutamate receptor, ionotropic, kainate 5 -0.0236048
KLHL13 kelch-like family member 13 -0.023423
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 -0.0234189
CYFIP1 cytoplasmic FMR1 interacting protein 1 -0.023346
PICALM phosphatidylinositol binding clathrin assembly protein -0.0233414
RPL38 ribosomal protein L38 -0.0232682
ESCO1 establishment of sister chromatid cohesion N-acetyltransferase 1 -0.0230187
PTPRD protein tyrosine phosphatase, receptor type, D -0.0228643
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0226377
RPS24 ribosomal protein S24 -0.0225996
HMGA2 high mobility group AT-hook 2 -0.0222875
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0220623
WWC2 WW and C2 domain containing 2 -0.0220441
ACBD3 acyl-CoA binding domain containing 3 -0.0218955
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0218915
IARS1 isoleucyl-tRNA synthetase 1 -0.0216184
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0215317
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0211975
ZNF804A zinc finger protein 804A -0.0211773
COL3A1 collagen, type III, alpha 1 -0.0211573