Pimitespib_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pimitespib perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pimitespib_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.343281
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.19256
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.10827
VIM vimentin 0.10734
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0752752
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0727767
DPP10 dipeptidyl-peptidase 10 (non-functional) 0.069259
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0649789
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0615936
RPL35A ribosomal protein L35a 0.0564915
RPLP0 ribosomal protein, large, P0 0.0556273
PSD3 pleckstrin and Sec7 domain containing 3 0.0549351
TPT1 tumor protein, translationally-controlled 1 0.053135
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0526722
SH3KBP1 SH3-domain kinase binding protein 1 0.0521272
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0497219
FTL ferritin, light polypeptide 0.0494762
SMAD2 SMAD family member 2 0.047373
SMOC1 SPARC related modular calcium binding 1 0.0469949
RPS8 ribosomal protein S8 0.0448479
KYNU kynureninase 0.0441547
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0432792
SQSTM1 sequestosome 1 0.0429919
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0420578
PDE4D phosphodiesterase 4D, cAMP-specific 0.0394599
RPL12 ribosomal protein L12 0.0386298
INHBA inhibin, beta A 0.0383127
RPLP1 ribosomal protein, large, P1 0.0378636
MAP7 microtubule-associated protein 7 0.0376755
LDHA lactate dehydrogenase A 0.0372354
S100A10 S100 calcium binding protein A10 0.0361968
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0361777
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0359998
LOC102724023 ES1 protein homolog, mitochondrial 0.0354187
BZW1 basic leucine zipper and W2 domains 1 0.0352116
CDH13 cadherin 13 0.0349025
LSAMP limbic system-associated membrane protein 0.0332686
UBC ubiquitin C 0.0322127
PRKN parkin RBR E3 ubiquitin protein ligase 0.0312929
XYLT1 xylosyltransferase I 0.0309896
FTH1 ferritin, heavy polypeptide 1 0.0298349
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0296138
ASTN2 astrotactin 2 0.0295568
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0287821
EEF2 eukaryotic translation elongation factor 2 0.0285744
RPS4X ribosomal protein S4, X-linked 0.0283636
DNER delta/notch-like EGF repeat containing 0.0282413
AGTPBP1 ATP/GTP binding protein 1 0.027834
LMNA lamin A/C 0.0273377
PGK1 phosphoglycerate kinase 1 0.0272191
RAB7A RAB7A, member RAS oncogene family 0.026896
RPL34 ribosomal protein L34 0.0259392
TMSB10 thymosin beta 10 0.0255265
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0254683
CTIF CBP80/20-dependent translation initiation factor 0.0254149
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0251045
ANXA2 annexin A2 0.0247203
OXSR1 oxidative stress responsive 1 0.0245268
WARS1 tryptophanyl-tRNA synthetase 1 0.0243638
CHD1 chromodomain helicase DNA binding protein 1 0.0243166
SOD2 superoxide dismutase 2, mitochondrial 0.0240844
EIF1 eukaryotic translation initiation factor 1 0.0239123
HSPH1 heat shock 105kDa/110kDa protein 1 0.0224183
PDIA3 protein disulfide isomerase family A, member 3 0.0218053
CANX calnexin 0.0216579
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0216122
RPL23 ribosomal protein L23 0.0216057
HSPA1A heat shock 70kDa protein 1A 0.0209759
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0203487
ZSWIM6 zinc finger, SWIM-type containing 6 0.0203113
P3H2 prolyl 3-hydroxylase 2 0.020159
RPL26 ribosomal protein L26 0.0197964
GRB10 growth factor receptor-bound protein 10 0.0194577
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.019412
NRXN3 neurexin 3 0.0194004
SOX4 SRY (sex determining region Y)-box 4 0.0189287
IL6 interleukin 6 0.0188518
BTG1 B-cell translocation gene 1, anti-proliferative 0.0188488
RPL7 ribosomal protein L7 0.0188141
PCDH9 protocadherin 9 0.0187469
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 0.0186456
NEFL neurofilament, light polypeptide 0.018533
RPS24 ribosomal protein S24 0.0185106
RAD51B RAD51 paralog B 0.0183712
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.0183587
HLA-A major histocompatibility complex, class I, A 0.018256
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 0.0181358
SFTPA2 surfactant protein A2 0.018112
RPL39 ribosomal protein L39 0.0180792
INTS6 integrator complex subunit 6 0.0180374
IARS1 isoleucyl-tRNA synthetase 1 0.0176342
FNDC3A fibronectin type III domain containing 3A 0.0175291
AHNAK AHNAK nucleoprotein 0.0173008
ANTXR1 anthrax toxin receptor 1 0.0171289
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0170118
RIGI RNA sensor RIG-I 0.0169067
IGFBP3 insulin-like growth factor binding protein 3 0.0167304
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.016641
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) 0.0163415
PDIA4 protein disulfide isomerase family A, member 4 0.0162859

decreased expression

Symbol Name Standardized Value
EFNA5 ephrin-A5 -0.159046
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.115595
GDA guanine deaminase -0.107841
NAMPT nicotinamide phosphoribosyltransferase -0.0878859
ASPH aspartate beta-hydroxylase -0.0839717
TXNRD1 thioredoxin reductase 1 -0.0792129
LIMCH1 LIM and calponin homology domains 1 -0.0753488
GRAMD1B GRAM domain containing 1B -0.0722137
EPB41L3 erythrocyte membrane protein band 4.1-like 3 -0.0711847
RPS2 ribosomal protein S2 -0.0695912
TRIO trio Rho guanine nucleotide exchange factor -0.0683671
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0657978
NEK7 NIMA-related kinase 7 -0.0604142
PCBP3 poly(rC) binding protein 3 -0.0600448
RTN4 reticulon 4 -0.0581102
MFF mitochondrial fission factor -0.0533034
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0530545
FNDC3B fibronectin type III domain containing 3B -0.0530418
MCL1 myeloid cell leukemia 1 -0.0526665
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0507406
TGFBI transforming growth factor, beta-induced, 68kDa -0.0503395
TM4SF1 transmembrane 4 L six family member 1 -0.0496671
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0485677
NRCAM neuronal cell adhesion molecule -0.0458407
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0449415
FN1 fibronectin 1 -0.0429887
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0426397
TOP2A topoisomerase (DNA) II alpha 170kDa -0.041951
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0409781
BCAR3 breast cancer anti-estrogen resistance 3 -0.0409382
ARHGAP29 Rho GTPase activating protein 29 -0.0408319
FLNB filamin B, beta -0.0401196
AGFG1 ArfGAP with FG repeats 1 -0.0399011
MT2A metallothionein 2A -0.0396861
ZFC3H1 zinc finger, C3H1-type containing -0.0389297
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0387666
KMT2E lysine (K)-specific methyltransferase 2E -0.038466
RBM39 RNA binding motif protein 39 -0.0381342
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0380583
CENPF centromere protein F, 350/400kDa -0.0378832
NDRG1 N-myc downstream regulated 1 -0.0377965
TNPO1 transportin 1 -0.037512
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0363904
MYOF myoferlin -0.0358242
PDE10A phosphodiesterase 10A -0.0357407
SAMD4A sterile alpha motif domain containing 4A -0.0356909
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0355714
MKI67 marker of proliferation Ki-67 -0.0347489
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.034225
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0341113
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0338154
ANKRD28 ankyrin repeat domain 28 -0.0337715
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0337025
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0334719
PUM2 pumilio RNA-binding family member 2 -0.0327172
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.032472
CTSC cathepsin C -0.0323986
SRPK2 SRSF protein kinase 2 -0.0323944
COL4A6 collagen, type IV, alpha 6 -0.0322075
CSNK1A1 casein kinase 1, alpha 1 -0.0319749
MSN moesin -0.0319032
VMP1 vacuole membrane protein 1 -0.031836
RPL37A ribosomal protein L37a -0.0314071
AVL9 AVL9 homolog (S. cerevisiase) -0.0311934
ATP13A3 ATPase type 13A3 -0.0309332
PTGR1 prostaglandin reductase 1 -0.030882
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0305589
WDFY2 WD repeat and FYVE domain containing 2 -0.0303737
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0295691
LAMB1 laminin, beta 1 -0.0295256
CFLAR CASP8 and FADD-like apoptosis regulator -0.0289047
TFPI2 tissue factor pathway inhibitor 2 -0.0284117
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.028351
PNISR PNN-interacting serine/arginine-rich protein -0.0281162
ANLN anillin, actin binding protein -0.0279457
COL4A5 collagen, type IV, alpha 5 -0.0274613
CARD16 caspase recruitment domain family, member 16 -0.0274338
ENAH enabled homolog (Drosophila) -0.0271297
GOLGA4 golgin A4 -0.0267739
SFPQ splicing factor proline/glutamine-rich -0.0267442
PRRC2C proline-rich coiled-coil 2C -0.0267067
DST dystonin -0.0266538
HEATR1 HEAT repeat containing 1 -0.0264533
BRWD3 bromodomain and WD repeat domain containing 3 -0.0263974
CLTC clathrin, heavy chain (Hc) -0.0260643
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0258803
ELL2 elongation factor, RNA polymerase II, 2 -0.0257461
GPRIN3 GPRIN family member 3 -0.0254895
NBAS neuroblastoma amplified sequence -0.0254219
MED13L mediator complex subunit 13-like -0.0254127
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0253176
CDK17 cyclin-dependent kinase 17 -0.0252271
RPL38 ribosomal protein L38 -0.0252075
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa -0.0251943
CDC73 cell division cycle 73 -0.0249009
XPO1 exportin 1 -0.0248554
DPY19L1 dpy-19-like 1 (C. elegans) -0.0245017
SETD5 SET domain containing 5 -0.0239476
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0238711
GPAT3 glycerol-3-phosphate acyltransferase 3 -0.0237837