Pioglitazone_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pioglitazone perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pioglitazone_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ITGA6 integrin, alpha 6 0.177289
PABPC1 poly(A) binding protein, cytoplasmic 1 0.174317
TXNIP thioredoxin interacting protein 0.131623
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.119983
FAT1 FAT atypical cadherin 1 0.116611
DSPP dentin sialophosphoprotein 0.106517
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.106021
AREG amphiregulin 0.0995468
EZR ezrin 0.0973072
EEF2 eukaryotic translation elongation factor 2 0.0965117
LDHA lactate dehydrogenase A 0.0945196
FLNB filamin B, beta 0.0926864
LMO7 LIM domain 7 0.0894894
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0793986
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0755832
KRT18 keratin 18, type I 0.0728199
ENO1 enolase 1, (alpha) 0.0722541
CANX calnexin 0.0659862
ASPH aspartate beta-hydroxylase 0.0654941
NDRG1 N-myc downstream regulated 1 0.064627
EMP1 epithelial membrane protein 1 0.0636905
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0627035
VEGFA vascular endothelial growth factor A 0.0604958
FAM13A family with sequence similarity 13, member A 0.0538419
AFF1 AF4/FMR2 family, member 1 0.0533217
ANXA1 annexin A1 0.0532192
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) 0.0526878
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0520071
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 0.0514299
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0512581
EHF ets homologous factor 0.0480463
ANXA2 annexin A2 0.047326
KRT19 keratin 19, type I 0.0463375
ESYT2 extended synaptotagmin-like protein 2 0.0454326
MUC17 mucin 17, cell surface associated 0.0453552
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.044569
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0439601
RPL11 ribosomal protein L11 0.0439565
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0437242
KTN1 kinectin 1 (kinesin receptor) 0.0435978
EIF1 eukaryotic translation initiation factor 1 0.0432161
AHNAK AHNAK nucleoprotein 0.0431547
MED13L mediator complex subunit 13-like 0.0428834
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B 0.0421677
ERRFI1 ERBB receptor feedback inhibitor 1 0.0421426
PGK1 phosphoglycerate kinase 1 0.0420969
GREB1L growth regulation by estrogen in breast cancer-like 0.0417739
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0417297
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0408196
TTC3 tetratricopeptide repeat domain 3 0.0401892
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0399118
GLS2 glutaminase 2 (liver, mitochondrial) 0.0397269
APLP2 amyloid beta (A4) precursor-like protein 2 0.039708
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0394459
CSDE1 cold shock domain containing E1, RNA-binding 0.039346
PDIA3 protein disulfide isomerase family A, member 3 0.039286
MYO1E myosin IE 0.038845
MUC6 mucin 6, oligomeric mucus/gel-forming 0.0374851
MACF1 microtubule-actin crosslinking factor 1 0.0372946
ARHGAP26 Rho GTPase activating protein 26 0.0371352
IQGAP1 IQ motif containing GTPase activating protein 1 0.0369506
MED13 mediator complex subunit 13 0.0368222
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.036751
UBE2H ubiquitin-conjugating enzyme E2H 0.0365772
SLK STE20-like kinase 0.036162
PCBP2 poly(rC) binding protein 2 0.036062
MYH9 myosin, heavy chain 9, non-muscle 0.0360102
CALB1 calbindin 1, 28kDa 0.0358817
CALR calreticulin 0.0357774
RCOR1 REST corepressor 1 0.0352739
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0351594
MPRIP myosin phosphatase Rho interacting protein 0.0347935
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.034659
PSD3 pleckstrin and Sec7 domain containing 3 0.0344626
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0342362
BAIAP2L1 BAI1-associated protein 2-like 1 0.0335951
ITPRID2 ITPR interacting domain containing 2 0.0333514
NCOR2 nuclear receptor corepressor 2 0.0332863
ARHGAP21 Rho GTPase activating protein 21 0.0331499
ANXA11 annexin A11 0.0329982
EREG epiregulin 0.0328037
DDIT4 DNA-damage-inducible transcript 4 0.0324902
TPM3 tropomyosin 3 0.0324785
MBNL2 muscleblind-like splicing regulator 2 0.0323888
LGALS3 lectin, galactoside-binding, soluble, 3 0.0323569
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0323514
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0321855
ZSWIM6 zinc finger, SWIM-type containing 6 0.0321658
PRELID2 PRELI domain containing 2 0.0319945
MLEC malectin 0.0319765
CCNY cyclin Y 0.0317978
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0313437
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0313205
P4HB prolyl 4-hydroxylase, beta polypeptide 0.031302
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0311674
YTHDC1 YTH domain containing 1 0.0309517
MBNL1 muscleblind-like splicing regulator 1 0.0307854
APP amyloid beta (A4) precursor protein 0.030569
FBXO11 F-box protein 11 0.0305626
LOC102724023 ES1 protein homolog, mitochondrial 0.0298959

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.135705
NPSR1 neuropeptide S receptor 1 -0.090285
TNS4 tensin 4 -0.0857206
GPHN gephyrin -0.0747881
GMDS GDP-mannose 4,6-dehydratase -0.0746411
VCL vinculin -0.0684193
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0649584
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0556081
RNF43 ring finger protein 43 -0.0455391
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0443944
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0438204
HMGB1 high mobility group box 1 -0.0433662
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0432926
H1-0 H1.0 linker histone -0.0423648
AGR2 anterior gradient 2 -0.0403541
CEMIP cell migration inducing protein, hyaluronan binding -0.0402903
PRSS3 protease, serine, 3 -0.0400248
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.03925
RPS24 ribosomal protein S24 -0.0367224
ONECUT3 one cut homeobox 3 -0.0365032
RPLP1 ribosomal protein, large, P1 -0.0348808
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0339939
SOX4 SRY (sex determining region Y)-box 4 -0.0324099
FOXP1 forkhead box P1 -0.0311955
IARS1 isoleucyl-tRNA synthetase 1 -0.0299886
RESF1 retroelement silencing factor 1 -0.0295596
ACTG1 actin gamma 1 -0.0275322
SAMD5 sterile alpha motif domain containing 5 -0.0266404
CLTC clathrin, heavy chain (Hc) -0.0265885
MGST1 microsomal glutathione S-transferase 1 -0.026508
FHIT fragile histidine triad -0.0264522
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 -0.0264422
FTH1 ferritin, heavy polypeptide 1 -0.0261212
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) -0.0249451
SLC35F3 solute carrier family 35, member F3 -0.0247943
PTPRG protein tyrosine phosphatase, receptor type, G -0.0243436
NRXN3 neurexin 3 -0.0236106
RPL35A ribosomal protein L35a -0.0234991
MECOM MDS1 and EVI1 complex locus -0.0229799
PCNX2 pecanex 2 -0.022796
HNRNPAB heterogeneous nuclear ribonucleoprotein A/B -0.0224596
CADPS2 Ca++-dependent secretion activator 2 -0.0219305
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.0217679
FAF1 Fas (TNFRSF6) associated factor 1 -0.0217242
TFRC transferrin receptor -0.0215073
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0214752
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.021313
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.0207194
PKP2 plakophilin 2 -0.0207078
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0204843
TMSB10 thymosin beta 10 -0.0204428
KAZN kazrin, periplakin interacting protein -0.020086
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) -0.0199817
SPIDR scaffolding protein involved in DNA repair -0.0199531
HLCS holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) -0.0198656
MAP4 microtubule-associated protein 4 -0.0198091
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0197849
KLF5 Kruppel-like factor 5 (intestinal) -0.0196701
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0196239
PTPRD protein tyrosine phosphatase, receptor type, D -0.0193675
PALLD palladin, cytoskeletal associated protein -0.0193635
NFIA nuclear factor I/A -0.0193558
RPL38 ribosomal protein L38 -0.0192086
MYO9A myosin IXA -0.019188
SEC24D SEC24 family member D -0.0191864
TPM4 tropomyosin 4 -0.019152
COMMD10 COMM domain containing 10 -0.0189827
CCND1 cyclin D1 -0.0189688
ENOSF1 enolase superfamily member 1 -0.0188593
PARD3B par-3 family cell polarity regulator beta -0.0187482
FOXP2 forkhead box P2 -0.0187023
SMYD3 SET and MYND domain containing 3 -0.0186918
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 -0.0185012
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0182833
MTAP methylthioadenosine phosphorylase -0.0182695
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 -0.0180701
LRRK1 leucine-rich repeat kinase 1 -0.0180649
UBE2J1 ubiquitin-conjugating enzyme E2, J1 -0.0179825
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 -0.0179204
IER3 immediate early response 3 -0.0178118
RPL6 ribosomal protein L6 -0.0178115
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0177613
CUL1 cullin 1 -0.017756
ERLEC1 endoplasmic reticulum lectin 1 -0.0176567
PRRC2B proline-rich coiled-coil 2B -0.0175272
RPL9 ribosomal protein L9 -0.0173809
RBM25 RNA binding motif protein 25 -0.01733
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0173242
KIAA1217 KIAA1217 -0.0172016
TPM1 tropomyosin 1 (alpha) -0.0170821
EGR1 early growth response 1 -0.0170523
RFX7 regulatory factor X, 7 -0.0169719
RTN3 reticulon 3 -0.0166659
RUBCNL rubicon like autophagy enhancer -0.0166603
MALT1 MALT1 paracaspase -0.0165622
TNRC18 trinucleotide repeat containing 18 -0.0165616
PTPRE protein tyrosine phosphatase, receptor type, E -0.0165109
HM13 histocompatibility (minor) 13 -0.0162453
PYGB phosphorylase, glycogen; brain -0.0162108
DLGAP1 discs, large (Drosophila) homolog-associated protein 1 -0.0161551