Pioglitazone_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pioglitazone perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pioglitazone_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.126241
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.110469
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.10366
TM4SF1 transmembrane 4 L six family member 1 0.0942317
CANX calnexin 0.0854567
ERRFI1 ERBB receptor feedback inhibitor 1 0.0844468
TXNRD1 thioredoxin reductase 1 0.0781266
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.076062
FMNL2 formin-like 2 0.0676943
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0649524
EZR ezrin 0.0638184
HDAC9 histone deacetylase 9 0.0636359
RAI1 retinoic acid induced 1 0.063113
EEF2 eukaryotic translation elongation factor 2 0.059676
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0594815
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0565903
CALR calreticulin 0.0547396
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0530356
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0515327
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0514635
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0509773
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0498683
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0481406
SQSTM1 sequestosome 1 0.0473993
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.047387
FNIP1 folliculin interacting protein 1 0.0467119
BCAR3 breast cancer anti-estrogen resistance 3 0.0454003
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0443338
LOXL2 lysyl oxidase-like 2 0.0442486
CSNK1A1 casein kinase 1, alpha 1 0.0436495
MYH9 myosin, heavy chain 9, non-muscle 0.0433917
RUNX1 runt-related transcription factor 1 0.0432357
ESYT2 extended synaptotagmin-like protein 2 0.0430217
YEATS2 YEATS domain containing 2 0.0423258
MBNL2 muscleblind-like splicing regulator 2 0.0418822
TSC22D1 TSC22 domain family, member 1 0.0416737
RAD51B RAD51 paralog B 0.0415343
ENO1 enolase 1, (alpha) 0.0414368
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0411721
NDRG1 N-myc downstream regulated 1 0.0411691
DENND1A DENN/MADD domain containing 1A 0.0398811
SMAD3 SMAD family member 3 0.0391282
KDM4B lysine (K)-specific demethylase 4B 0.0387346
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0375579
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0375251
ARRDC3 arrestin domain containing 3 0.0374598
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0369747
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0365989
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0362473
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0361146
MCL1 myeloid cell leukemia 1 0.0359704
ADAM10 ADAM metallopeptidase domain 10 0.0357471
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0354451
GSK3B glycogen synthase kinase 3 beta 0.0354068
CLTC clathrin, heavy chain (Hc) 0.0343806
TRIO trio Rho guanine nucleotide exchange factor 0.0343336
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0338933
USP9X ubiquitin specific peptidase 9, X-linked 0.0330018
GLG1 golgi glycoprotein 1 0.0327854
DSCAM Down syndrome cell adhesion molecule 0.0323128
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0322635
MYOF myoferlin 0.0320601
DLG1 discs, large homolog 1 (Drosophila) 0.0318745
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0317939
EXOC4 exocyst complex component 4 0.0312717
PLK2 polo-like kinase 2 0.0309634
CLIP2 CAP-GLY domain containing linker protein 2 0.0308801
APP amyloid beta (A4) precursor protein 0.0308383
UPP1 uridine phosphorylase 1 0.0306791
SBF2 SET binding factor 2 0.0306369
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0301836
KCMF1 potassium channel modulatory factor 1 0.0301098
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 0.0298888
SDK1 sidekick cell adhesion molecule 1 0.0298819
NAV2 neuron navigator 2 0.0298358
MACF1 microtubule-actin crosslinking factor 1 0.0297895
SMYD3 SET and MYND domain containing 3 0.0297722
SOD2 superoxide dismutase 2, mitochondrial 0.0296354
XPO1 exportin 1 0.0295631
SLCO1B3 solute carrier organic anion transporter family, member 1B3 0.02937
NAMPT nicotinamide phosphoribosyltransferase 0.0293431
PDE8A phosphodiesterase 8A 0.0292753
VCL vinculin 0.0290347
GIGYF2 GRB10 interacting GYF protein 2 0.0287452
PIAS2 protein inhibitor of activated STAT, 2 0.028663
PTK2 protein tyrosine kinase 2 0.0284868
MCTP1 multiple C2 domains, transmembrane 1 0.0283211
USP34 ubiquitin specific peptidase 34 0.0283152
SBNO1 strawberry notch homolog 1 (Drosophila) 0.0281113
KDM2A lysine (K)-specific demethylase 2A 0.0280006
AMBRA1 autophagy/beclin-1 regulator 1 0.0279978
PGK1 phosphoglycerate kinase 1 0.0279859
ZNF292 zinc finger protein 292 0.027749
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0276487
IGF1R insulin-like growth factor 1 receptor 0.02741
CCDC47 coiled-coil domain containing 47 0.0273682
AFF4 AF4/FMR2 family, member 4 0.0273387
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0273139
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) 0.0269179
LPP LIM domain containing preferred translocation partner in lipoma 0.0269119

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.201912
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0781561
MT2A metallothionein 2A -0.0759233
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0626193
RPS6 ribosomal protein S6 -0.0624866
RPL35A ribosomal protein L35a -0.0549138
ACTG1 actin gamma 1 -0.054724
POTEF POTE ankyrin domain family, member F -0.0503868
TMSB10 thymosin beta 10 -0.045493
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0423426
RAB27B RAB27B, member RAS oncogene family -0.036157
MT1X metallothionein 1X -0.0350943
RPS24 ribosomal protein S24 -0.0346367
PTMA prothymosin, alpha -0.0344476
RPL37 ribosomal protein L37 -0.0328336
TMSB4X thymosin beta 4, X-linked -0.0324226
FTH1 ferritin, heavy polypeptide 1 -0.0324014
RPS8 ribosomal protein S8 -0.0314226
EIF5B eukaryotic translation initiation factor 5B -0.0306993
RPL9 ribosomal protein L9 -0.0306093
RPS19 ribosomal protein S19 -0.0300997
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0280247
HLA-B major histocompatibility complex, class I, B -0.0265452
RPLP1 ribosomal protein, large, P1 -0.0261993
PLIN2 perilipin 2 -0.0258128
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0257649
KLF6 Kruppel-like factor 6 -0.0256336
TP63 tumor protein p63 -0.0256331
RPL26 ribosomal protein L26 -0.0254925
RPS12 ribosomal protein S12 -0.0250285
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0248321
RPL19 ribosomal protein L19 -0.0244536
WSB1 WD repeat and SOCS box containing 1 -0.0241541
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0228728
RPLP2 ribosomal protein, large, P2 -0.0227059
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0225712
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0224916
RSRC2 arginine/serine-rich coiled-coil 2 -0.0214021
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.021284
RPS25 ribosomal protein S25 -0.0212806
RPS23 ribosomal protein S23 -0.020959
VDAC1 voltage-dependent anion channel 1 -0.0209286
RPL36 ribosomal protein L36 -0.0209275
RPL37A ribosomal protein L37a -0.0207285
H1-0 H1.0 linker histone -0.0199733
CADM2 cell adhesion molecule 2 -0.0198834
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0196452
RAP2B RAP2B, member of RAS oncogene family -0.0194796
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0193998
HMGA1 high mobility group AT-hook 1 -0.019363
DST dystonin -0.0189754
HMGB1 high mobility group box 1 -0.0187312
TAPBP TAP binding protein (tapasin) -0.0185805
WDR43 WD repeat domain 43 -0.0185075
TLK1 tousled-like kinase 1 -0.0184153
IARS1 isoleucyl-tRNA synthetase 1 -0.0182742
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 -0.0179729
CD44 CD44 molecule (Indian blood group) -0.0179647
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0176973
RGS4 regulator of G-protein signaling 4 -0.0173254
RPS11 ribosomal protein S11 -0.0173021
RPL34 ribosomal protein L34 -0.0171825
URI1 URI1, prefoldin-like chaperone -0.0171121
NPR2 natriuretic peptide receptor 2 -0.0169943
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0169878
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0168527
RPS28 ribosomal protein S28 -0.0164378
NEMF nuclear export mediator factor -0.016268
EEF1B2 eukaryotic translation elongation factor 1 beta 2 -0.016253
HLA-A major histocompatibility complex, class I, A -0.0161863
RPS4X ribosomal protein S4, X-linked -0.0161526
RPS14 ribosomal protein S14 -0.0157366
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0157137
RPS27A ribosomal protein S27a -0.0155691
RPL27 ribosomal protein L27 -0.0155168
ZC3H15 zinc finger CCCH-type containing 15 -0.0154181
RPL36A ribosomal protein L36a -0.0154067
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0152911
RPL23 ribosomal protein L23 -0.0152572
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0152106
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1 -0.0151386
COL5A2 collagen, type V, alpha 2 -0.0150816
RPL12 ribosomal protein L12 -0.0150745
LOC102724023 ES1 protein homolog, mitochondrial -0.0149874
NOP58 NOP58 ribonucleoprotein -0.0149655
EIF1AX eukaryotic translation initiation factor 1A, X-linked -0.0149653
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0147484
RPS21 ribosomal protein S21 -0.0145603
DEK DEK proto-oncogene -0.0145511
RPL35 ribosomal protein L35 -0.0145294
CFAP299 cilia and flagella associated protein 299 -0.0144916
DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 -0.0144099
DNAJC2 DnaJ (Hsp40) homolog, subfamily C, member 2 -0.0143268
TUBB4B tubulin, beta 4B class IVb -0.0143228
BRD4 bromodomain containing 4 -0.0141599
RPL31 ribosomal protein L31 -0.0141239
RBM25 RNA binding motif protein 25 -0.0139494
GPAT3 glycerol-3-phosphate acyltransferase 3 -0.0139073
YBX1 Y box binding protein 1 -0.0138549
DNMT1 DNA (cytosine-5-)-methyltransferase 1 -0.0138451