Pioglitazone_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pioglitazone perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pioglitazone_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.165492
DSCAM Down syndrome cell adhesion molecule 0.119905
FN1 fibronectin 1 0.119881
FNDC3B fibronectin type III domain containing 3B 0.111007
ASPH aspartate beta-hydroxylase 0.108757
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.1066
CANX calnexin 0.106585
SAMD4A sterile alpha motif domain containing 4A 0.101534
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0995673
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0932041
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0931878
MYH9 myosin, heavy chain 9, non-muscle 0.0892738
CALR calreticulin 0.0843441
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0840831
MYO6 myosin VI 0.081013
EXT1 exostosin glycosyltransferase 1 0.077922
TRIO trio Rho guanine nucleotide exchange factor 0.0771761
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.076875
LIMCH1 LIM and calponin homology domains 1 0.0748743
AKAP13 A kinase (PRKA) anchor protein 13 0.0747971
TM4SF1 transmembrane 4 L six family member 1 0.0728777
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0721401
PTK2 protein tyrosine kinase 2 0.0717065
ZSWIM6 zinc finger, SWIM-type containing 6 0.0686989
ANXA2 annexin A2 0.0655433
AHNAK AHNAK nucleoprotein 0.0653394
FAM13A family with sequence similarity 13, member A 0.0612063
ELL2 elongation factor, RNA polymerase II, 2 0.0609654
GOLGA4 golgin A4 0.0602994
APLP2 amyloid beta (A4) precursor-like protein 2 0.0602322
FLNB filamin B, beta 0.0585043
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0582831
SPAG9 sperm associated antigen 9 0.057967
LPP LIM domain containing preferred translocation partner in lipoma 0.057612
KDM3A lysine (K)-specific demethylase 3A 0.0563087
RCOR1 REST corepressor 1 0.0550294
ALCAM activated leukocyte cell adhesion molecule 0.0548121
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0545747
LAMC2 laminin, gamma 2 0.0544554
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.053622
PDLIM5 PDZ and LIM domain 5 0.0527614
LMO7 LIM domain 7 0.0520021
IQGAP1 IQ motif containing GTPase activating protein 1 0.0512003
UBE2H ubiquitin-conjugating enzyme E2H 0.0506693
GRB10 growth factor receptor-bound protein 10 0.0505712
KMT2E lysine (K)-specific methyltransferase 2E 0.0498592
ERBIN erbb2 interacting protein 0.0497856
EIF1 eukaryotic translation initiation factor 1 0.0494512
PLEC plectin 0.04945
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0493474
HMGB2 high mobility group box 2 0.0486471
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0478615
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0464297
PPARD peroxisome proliferator-activated receptor delta 0.0461254
SEC23A Sec23 homolog A (S. cerevisiae) 0.046067
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0460478
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0459748
MARCHF6 membrane associated ring-CH-type finger 6 0.0457083
DTNA dystrobrevin, alpha 0.0450459
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0448831
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0448258
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0446133
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0442376
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0441989
CTNND1 catenin (cadherin-associated protein), delta 1 0.0440567
USP9X ubiquitin specific peptidase 9, X-linked 0.0437357
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0436614
VCL vinculin 0.0436156
ANXA1 annexin A1 0.0435412
KDM6A lysine (K)-specific demethylase 6A 0.0435261
TPT1 tumor protein, translationally-controlled 1 0.0430679
GPBP1 GC-rich promoter binding protein 1 0.0429431
MACF1 microtubule-actin crosslinking factor 1 0.0425578
DUSP10 dual specificity phosphatase 10 0.0424732
CSNK1A1 casein kinase 1, alpha 1 0.0419363
NIPBL Nipped-B homolog (Drosophila) 0.0419033
SMAD3 SMAD family member 3 0.0415621
CTBP2 C-terminal binding protein 2 0.0413921
ERRFI1 ERBB receptor feedback inhibitor 1 0.041204
SPTBN1 spectrin, beta, non-erythrocytic 1 0.041109
RAD21 RAD21 homolog (S. pombe) 0.0409634
CD109 CD109 molecule 0.0407134
AFF1 AF4/FMR2 family, member 1 0.0398359
RBM39 RNA binding motif protein 39 0.0397978
TMF1 TATA element modulatory factor 1 0.0394662
SH3KBP1 SH3-domain kinase binding protein 1 0.0392643
YTHDC1 YTH domain containing 1 0.0391898
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0391638
LAMB3 laminin, beta 3 0.0387568
LDHA lactate dehydrogenase A 0.0384207
MYO1E myosin IE 0.0378044
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0376815
EFNA5 ephrin-A5 0.0372453
MYO5B myosin VB 0.036965
COPA coatomer protein complex, subunit alpha 0.0368077
ZFAND3 zinc finger, AN1-type domain 3 0.0364725
ARHGAP5 Rho GTPase activating protein 5 0.0362896
ITCH itchy E3 ubiquitin protein ligase 0.0362573
FNIP1 folliculin interacting protein 1 0.0358908
HELZ helicase with zinc finger 0.0355831

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.208998
POTEF POTE ankyrin domain family, member F -0.134846
ACTG1 actin gamma 1 -0.106172
FTL ferritin, light polypeptide -0.0942204
HMGA1 high mobility group AT-hook 1 -0.0921868
TMSB10 thymosin beta 10 -0.0896317
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0716052
RPL35A ribosomal protein L35a -0.0546838
RPLP1 ribosomal protein, large, P1 -0.0484764
MT2A metallothionein 2A -0.0480716
FTH1 ferritin, heavy polypeptide 1 -0.0480441
ISG15 ISG15 ubiquitin-like modifier -0.0410759
IFI27 interferon, alpha-inducible protein 27 -0.0333232
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0330204
FOSL1 FOS-like antigen 1 -0.031539
RPS6 ribosomal protein S6 -0.0315253
RPS19 ribosomal protein S19 -0.0305738
RPLP2 ribosomal protein, large, P2 -0.029915
RPL28 ribosomal protein L28 -0.02927
RPS8 ribosomal protein S8 -0.027126
RPS23 ribosomal protein S23 -0.0266301
RPL9 ribosomal protein L9 -0.0263263
S100A6 S100 calcium binding protein A6 -0.0261262
IFITM3 interferon induced transmembrane protein 3 -0.0258591
RPS14 ribosomal protein S14 -0.0258487
RPL8 ribosomal protein L8 -0.0253994
NDRG1 N-myc downstream regulated 1 -0.0253412
CCND1 cyclin D1 -0.0247163
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.024559
PFN1 profilin 1 -0.0242767
HMGB1 high mobility group box 1 -0.024212
S100A10 S100 calcium binding protein A10 -0.0229933
LOC112694756 uncharaterized LOC112694756 -0.02142
YBX1 Y box binding protein 1 -0.0213153
RPL36 ribosomal protein L36 -0.0212325
RPL32 ribosomal protein L32 -0.0211113
SH3BGRL3 SH3 domain binding glutamate-rich protein like 3 -0.0210649
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0207938
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0206356
S100A11 S100 calcium binding protein A11 -0.0205186
LY6E lymphocyte antigen 6 complex, locus E -0.0204326
HSPB1 heat shock 27kDa protein 1 -0.0203828
MUC1 mucin 1, cell surface associated -0.0196463
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0195484
CCNL1 cyclin L1 -0.0189965
EGR1 early growth response 1 -0.0189705
IFI16 interferon, gamma-inducible protein 16 -0.0186764
FHIT fragile histidine triad -0.0186737
S100A9 S100 calcium binding protein A9 -0.0184403
COX7C cytochrome c oxidase subunit VIIc -0.0183166
PLP2 proteolipid protein 2 (colonic epithelium-enriched) -0.0180896
RPL30 ribosomal protein L30 -0.0179738
TAPBP TAP binding protein (tapasin) -0.0178963
RPL34 ribosomal protein L34 -0.0178336
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0176895
RPS25 ribosomal protein S25 -0.017081
IFI6 interferon, alpha-inducible protein 6 -0.0169906
CLDN4 claudin 4 -0.016018
RACK1 receptor for activated C kinase 1 -0.0159811
TXNRD1 thioredoxin reductase 1 -0.0158849
RPS5 ribosomal protein S5 -0.0153931
RPL19 ribosomal protein L19 -0.0151501
RPL37 ribosomal protein L37 -0.0150601
MRPS6 mitochondrial ribosomal protein S6 -0.0150434
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B -0.014983
SLC34A2 solute carrier family 34 (type II sodium/phosphate cotransporter), member 2 -0.0149492
SYT1 synaptotagmin I -0.0148678
RPL35 ribosomal protein L35 -0.0147283
RPS15 ribosomal protein S15 -0.0145998
RPS20 ribosomal protein S20 -0.0145727
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0144588
RPL37A ribosomal protein L37a -0.0144152
SFTPA1 surfactant protein A1 -0.0138125
IER3 immediate early response 3 -0.0137144
GPX1 glutathione peroxidase 1 -0.0136814
CST3 cystatin C -0.0135025
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0133985
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0133166
VDAC1 voltage-dependent anion channel 1 -0.0131693
IFITM1 interferon induced transmembrane protein 1 -0.0131206
NPC2 Niemann-Pick disease, type C2 -0.0130312
GPX4 glutathione peroxidase 4 -0.0129173
ICAM1 intercellular adhesion molecule 1 -0.0128224
TUBB4B tubulin, beta 4B class IVb -0.0127877
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) -0.0127689
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0127212
BSG basigin (Ok blood group) -0.0126636
S100A4 S100 calcium binding protein A4 -0.0126006
TUBA1B tubulin, alpha 1b -0.0123735
RHOF ras homolog family member F (in filopodia) -0.0122928
SACK1A scaffolding CK1 anchoring protein A -0.0122675
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0122443
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0122128
FOXP1 forkhead box P1 -0.012135
RPS17 ribosomal protein S17 -0.0120813
RHOBTB3 Rho-related BTB domain containing 3 -0.0120549
RPS11 ribosomal protein S11 -0.0119912
ATP5F1E ATP synthase F1 subunit epsilon -0.0118742
RPL27 ribosomal protein L27 -0.0117161
RPL23A ribosomal protein L23a -0.0115744